閃躲是為了呈現真實不違背心

!!SEQUENCE_LIST 1.0
BLASTP 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= /export/users/stud02/gi-85362735.pep
(461 letters)

Database: sh
4 sequences; 1697 total letters

Searching.done

Score E
Sequences producing significant alignments: (bits) Value ..

gi-85362735.pep Begin: 52 End: 461
!gi|85362735|ref|NP_009052.3| oxysterols receptor... 610 e-178
gi-85362735.pep Begin: 37 End: 67
!gi|85362735|ref|NP_009052.3| oxysterols receptor...
gi-194294519.pep Begin: 47 End: 402
!gi|194294519|ref|NP_001123574.1| oxysterols rec... 446 e-129
gi-194294517.pep Begin: 92 End: 447
!gi|194294517|ref|NP_005684.2| oxysterols recept... 446 e-129
gi-194328806.pep Begin: 235 End: 387
!gi|194328806|ref|NP_001123573.1| oxysterols rec... 231 1e-64
gi-194328806.pep Begin: 92 End: 236
!gi|194328806|ref|NP_001123573.1| oxysterols rec...
\\End of List

>gi-85362735.pep gi|85362735|ref|NP_009052.3| oxysterols receptor LXR-beta [Homo
sapiens]
Length = 461

Score = 610 bits (1573), Expect = e-178
Identities = 321/410 (78%), Positives = 321/410 (78%)

Query: 52 ASSACSTDWVIPDXXXXXXXXXXXXXXXXMLGHELCRVCGDKASGFHYNVLSCEGCKGFF 111
ASSACSTDWVIPD MLGHELCRVCGDKASGFHYNVLSCEGCKGFF
Sbjct: 52 ASSACSTDWVIPDPEEEPERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFF 111

Query: 112 RRSVVXXXXXXXXXXXXXTCQMDAFMXXXXXXXXXXXXXEAGMREQCVLSEEQIRKKKIR 171
RRSVV TCQMDAFM EAGMREQCVLSEEQIRKKKIR
Sbjct: 112 RRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIR 171

Query: 172 KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAAQELMIQQL 231
K LTAAQELMIQQL
Sbjct: 172 KQQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQL 231

Query: 232 VAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPG 291
VAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPG
Sbjct: 232 VAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPG 291

Query: 292 FLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFIN 351
FLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFIN
Sbjct: 292 FLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFIN 351

Query: 352 PIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKR 411
PIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKR
Sbjct: 352 PIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKR 411

Query: 412 PQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 461
PQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
Sbjct: 412 PQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 461



Score = 20.0 bits (40), Expect = 0.60
Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 251 PWPLGADPQSRDARQQRFAHFTELAIISVQE 281
PWP G DP + A T+ I +E
Sbjct: 37 PWPGGPDPDVPGTDEASSACSTDWVIPDPEE 67


>gi-194294519.pep gi|194294519|ref|NP_001123574.1| oxysterols receptor LXR-alpha
isoform c [Homo s
Length = 402

Score = 446 bits (1146), Expect = e-129
Identities = 239/381 (62%), Positives = 272/381 (71%), Gaps = 25/381 (6%)

Query: 81 MLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVXXXXXXXXXXXXXTCQMDAFMXXX 140
MLG+ELC VCGDKASGFHYNVLSCEGCKGFFRRSV+ C MD +M
Sbjct: 47 MLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGH--CPMDTYMRRK 104

Query: 141 XXXXXXXXXXEAGMREQCVLSEEQIRKKKIRKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
+AGMRE+CVLSEEQIR KK+++
Sbjct: 105 CQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQ---- 160

Query: 201 XXXXXXXXXXXXXXXXXXXLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQS 260
L+ Q MI++LVAAQ QCN+RSFSD+ +VTPWP+ DP S
Sbjct: 161 -------------------LSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHS 201

Query: 261 RDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRY 320
R+ARQQRFAHFTELAI+SVQEIVDFAKQ+PGFLQL REDQIALLK S IE+MLLET+RRY
Sbjct: 202 REARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRY 261

Query: 321 NHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFS 380
N +E ITFLKDF+Y+++DF +AGLQVEFINPIFEFSRAM L L+DAE+ALLIAI+IFS
Sbjct: 262 NPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFS 321

Query: 381 ADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVF 440
ADRPNVQ+ +VE LQ YVEAL +Y I P D+L FPRMLMKLVSLRTLSSVHSEQVF
Sbjct: 322 ADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVF 381

Query: 441 ALRLQDKKLPPLLSEIWDVHE 461
ALRLQDKKLPPLLSEIWDVHE
Sbjct: 382 ALRLQDKKLPPLLSEIWDVHE 402


>gi-194294517.pep gi|194294517|ref|NP_005684.2| oxysterols receptor LXR-alpha isoform
a [Homo sapi
Length = 447

Score = 446 bits (1146), Expect = e-129
Identities = 239/381 (62%), Positives = 272/381 (71%), Gaps = 25/381 (6%)

Query: 81 MLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVXXXXXXXXXXXXXTCQMDAFMXXX 140
MLG+ELC VCGDKASGFHYNVLSCEGCKGFFRRSV+ C MD +M
Sbjct: 92 MLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGH--CPMDTYMRRK 149

Query: 141 XXXXXXXXXXEAGMREQCVLSEEQIRKKKIRKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
+AGMRE+CVLSEEQIR KK+++
Sbjct: 150 CQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQ---- 205

Query: 201 XXXXXXXXXXXXXXXXXXXLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQS 260
L+ Q MI++LVAAQ QCN+RSFSD+ +VTPWP+ DP S
Sbjct: 206 -------------------LSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHS 246

Query: 261 RDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRY 320
R+ARQQRFAHFTELAI+SVQEIVDFAKQ+PGFLQL REDQIALLK S IE+MLLET+RRY
Sbjct: 247 REARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRY 306

Query: 321 NHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFS 380
N +E ITFLKDF+Y+++DF +AGLQVEFINPIFEFSRAM L L+DAE+ALLIAI+IFS
Sbjct: 307 NPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFS 366

Query: 381 ADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVF 440
ADRPNVQ+ +VE LQ YVEAL +Y I P D+L FPRMLMKLVSLRTLSSVHSEQVF
Sbjct: 367 ADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVF 426

Query: 441 ALRLQDKKLPPLLSEIWDVHE 461
ALRLQDKKLPPLLSEIWDVHE
Sbjct: 427 ALRLQDKKLPPLLSEIWDVHE 447


>gi-194328806.pep gi|194328806|ref|NP_001123573.1| oxysterols receptor LXR-alpha
isoform b [Homo s
Length = 387

Score = 231 bits (589), Expect = 1e-64
Identities = 117/153 (76%), Positives = 133/153 (86%)

Query: 309 IEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDA 368
+ +MLLET+RRYN +E ITFLKDF+Y+++DF +AGLQVEFINPIFEFSRAM L L+DA
Sbjct: 235 VTVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDA 294

Query: 369 EYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSL 428
E+ALLIAI+IFSADRPNVQ+ +VE LQ YVEAL +Y I P D+L FPRMLMKLVSL
Sbjct: 295 EFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSL 354

Query: 429 RTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 461
RTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
Sbjct: 355 RTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 387



Score = 118 bits (296), Expect = 1e-30
Identities = 72/170 (42%), Positives = 86/170 (50%), Gaps = 25/170 (14%)

Query: 81 MLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVXXXXXXXXXXXXXTCQMDAFMXXX 140
MLG+ELC VCGDKASGFHYNVLSCEGCKGFFRRSV+ C MD +M
Sbjct: 92 MLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGH--CPMDTYMRRK 149

Query: 141 XXXXXXXXXXEAGMREQCVLSEEQIRKKKIRKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
+AGMRE+CVLSEEQIR KK+++
Sbjct: 150 CQECRLRKCRQAGMREECVLSEEQIRLKKLKR-----------------------QEEEQ 186

Query: 201 XXXXXXXXXXXXXXXXXXXLTAAQELMIQQLVAAQLQCNKRSFSDQPKVT 250
L+ Q MI++LVAAQ QCN+RSFSD+ +VT
Sbjct: 187 AHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVT 236


Database: sh
Posted date: Jun 30, 2010 12:19 PM
Number of letters in database: 1697
Number of sequences in database: 4

Lambda K H
0.324 0.136 0.402

Gapped
Lambda K H
0.267 0.0410 0.140


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2001
Number of Sequences: 4
Number of extensions: 44
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 461
length of database: 1697
effective HSP length: 42
effective length of query: 419
effective length of database: 1529
effective search space: 640651
effective search space used: 640651
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 30 (16.9 bits)
S2: 30 (16.2 bits)

(Linear) MAP of: gi-194328805222-1385.seq check: 6999 from: 1 to: 1164

gi|194328805:222-1385 Homo sapiens nuclear receptor subfamily 1, group H, member
3 (NR1H3), transcript variant 2, mRNA

Using Enzyme data from: enzyme.dat FileCheck: 8449

Note that some entries in this file are prefixed by ;. These entries
have recognition sites which are very common and therefore by default
these entries are not included in the search (according to David Ghosh these
are entries for which N_PROB > 5.0e-04). If you wish your search
to include these entries, specify /ENZ=** (VMS) or -enz=** (UNIX) on
the command line of any of the mapping programs (MAP, MAPLOT, or . . .

With 9677 enzymes: *

June 30, 2010 00:10 ..

galR_CS
SS5-core-site |
CuSE_CS | |
AP-1-IL-3_(2) | | |
GCN4-HIS3.2| | | |
GCN4-ILV1.1| | | |
CNBP-SRE|| | | |
ADD1/SREBP_site_(2)|| | | |
T3R_TRE1_CS ||| | | |
GCRE | ||| | | |
GCN4-HIS | ||| | | |
GCN4-HIS3.5 | ||| | | |
GCN4-HIS4.1 | ||| | | |
GCN4-HIS4.2 | ||| | | |
malT_CS | ||| | | |
Bas1_RS | ||| | | |
Pu_box| | ||| | | |
histone_H4_CS.2 || | ||| | | |
malT-malPp | || | ||| | | |
MCBF_RS | | || | ||| | | |
abaA-consensus | | || | ||| | | |
Msn2_CS | | | || | ||| | | |
Msn4_CS | | | || | ||| | | |
GR-intron-site-2 | | | | || | ||| | | |
Sp1-gamma-globin_(3) | | | | || | ||| | | |
GC/FAR_site_(2) | | | | | || | ||| | | |
Sp1-gamma-globin_(3)| | | | | | || | ||| | | |
GR-MT-IIA betaP-F4 || | |Tec1_CS | | || | ||| | | |
| | || | | | | | || | ||| | | |
ATGTCCTTGTGGCTGGGGGCCCCTGTGCCTGACATTCCTCCTGACTCTGCGGTGGAGCTG
1 ---------+---------+---------+---------+---------+---------+ 60
TACAGGAACACCGACCCCCGGGGACACGGACTGTAAGGAGGACTGAGACGCCACCTCGAC

a M S L W L G A P V P D I P P D S A V E L -
b C P C G W G P L C L T F L L T L R W S C -
c V L V A G G P C A * H S S * L C G G A V -

Ets-1_CS
GAGA_box/CT_element
BPC1_CS
E2A_CS |
E2A-CAMLG |
MyoD_CS2 |
E2A_site_consensus| |
E2A_site_consensus || |
USF-APP || |
E2A_CS| || |
E2A-CAMLG| || |
AP-4-HIV-1| || |
Sp1-erk1_(1) || || |
Ets-1_CS Sp1-VGF_(1)| || || |
Ets_CS| AP-2_CS5 || || || |
PEA3_CS2| AP-2-Bfsp1 || || || |
Elk-1-CS||oct-B2-SV40 | || || || |
||| | | || || || |
TGGAAGCCAGGCGCACAGGATGCAAGCAGCCAGGCCCAGGGAGGCAGCAGCTGCATCCTC
61 ---------+---------+---------+---------+---------+---------+ 120
ACCTTCGGTCCGCGTGTCCTACGTTCGTCGGTCCGGGTCCCTCCGTCGTCGACGTAGGAG

a W K P G A Q D A S S Q A Q G G S S C I L -
b G S Q A H R M Q A A R P R E A A A A S S -
c E A R R T G C K Q P G P G R Q Q L H P Q -

Sp1-complement_factor_I
delta-rpL7|
APRT-CHO_US||
APRT-human_US||
Ets-1_CS EKLF_CS|||
PEA3-CAMLG| BKLF_CS|||
UASPHR_site| KLF15-CS|||
Elg_CS| CCAC-box||||
Erg_CS2| Sp1-YB1||||
PEA3_RS || Thy-1-FP-V|||||
PEA3_CS || CAC-bp-beta-globin-HS-3_(1) ||||||
Pu_box| || JCV_repeated_sequence| ||||||
Ets-1_CS| || PuF_RS| ||||||
F-2-alpha_CS| || betaE-F3| ||||||
PEA3_CS2|| || KKLF_CS|| ||||||
PU.1_CS|| || Ace2-mdscan-motif-2 Msn2_CS ||| ||||||
FSE2.1||| ||rSM22-alpha-TCE | Msn4_CS ||| ||||||
|||| || | | | ||| ||||||
AGAGAGGAAGCCAGGATGCCCCACTCTGCTGGGGGTACTGCAGGGGTGGGGCTGGAGGCT
121 ---------+---------+---------+---------+---------+---------+ 180
TCTCTCCTTCGGTCCTACGGGGTGAGACGACCCCCATGACGTCCCCACCCCGACCTCCGA

a R E E A R M P H S A G G T A G V G L E A -
b E R K P G C P T L L G V L Q G W G W R L -
c R G S Q D A P L C W G Y C R G G A G G C -

ASP-CYP21
Rap1p-broad-CS
RAP1_consensus |
Msn2_CS | |
TFIIIA_CS Msn4_CS | |
| | | |
GCAGAGCCCACAGCCCTGCTCACCAGGGCAGAGCCCCCTTCAGAACCCACAGAGATCCGT
181 ---------+---------+---------+---------+---------+---------+ 240
CGTCTCGGGTGTCGGGACGAGTGGTCCCGTCTCGGGGGAAGTCTTGGGTGTCTCTAGGCA

a A E P T A L L T R A E P P S E P T E I R -
b Q S P Q P C S P G Q S P L Q N P Q R S V -
c R A H S P A H Q G R A P F R T H R D P S -

Hac1_CS
EFII-RSV |
MIG1_consensus | |
Ace2-mdscan-motif-2 | | |
Mig1_CS | | | |
CuSE_CS| | | | |
AP-2_CS5 || | | | |
AP-2-cyclinD2_(1) || | | | |
Sp1-complement_factor_I | || | | | |
AP-2_CS5 | | || | | | |
AP-2-TBXAS1_(2) | | || | | | |
Swi5-mdscan-motif-1 | | || | | | |
Sp1-gamma-globin_(3) | | | || | | | |
Hxk2/Med8_CS | | | || | | | |
Msn2_CS | | | | || | | | |
Msn4_CS | | | | || | | | |
Dof4_CS | | | | | || | | | |
ECB_consensus | | | | | | || | | | |
CAP-box| | | | | | | || | | | |
HSV_IE_repeat|| | | | | | | || | | | |
Dof2_CS ||| | | | | | | || | | | |
Dof4_CS ||| | | | | | | || | | | |
_consensus | ||| | | | | | | || | |Pho4_CS |XRE_CS1
| | ||| | | | | | | || | | | | |
CCACAAAAGCGGAAAAAGGGGCCAGCCCCCAAAATGCTGGGGAACGAGCTATGCAGCGTG
241 ---------+---------+---------+---------+---------+---------+ 300
GGTGTTTTCGCCTTTTTCCCCGGTCGGGGGTTTTACGACCCCTTGCTCGATACGTCGCAC

a P Q K R K K G P A P K M L G N E L C S V -
b H K S G K R G Q P P K C W G T S Y A A C -
c T K A E K G A S P Q N A G E R A M Q R V -

GR/PR-connexin43
GR-uteroglobin.1 |
GR-uteroglobin.2 |
SOX_CS | |
galR_CS | |
DSXF-FBE/_A| | |
AP-2_beta_CS || | |
T-antigen_RS | || | |
AP-2_site | | || | |
AP-2_beta_CS | | || | | CTC-element-2
GR-intron-site-3 | | | || | | NFkB_CS1 |
| | | | || | | | |
TGTGGGGACAAGGCCTCGGGCTTCCACTACAATGTTCTGAGCTGCGAGGGCTGCAAGGGA
301 ---------+---------+---------+---------+---------+---------+ 360
ACACCCCTGTTCCGGAGCCCGAAGGTGATGTTACAAGACTCGACGCTCCCGACGTTCCCT

a C G D K A S G F H Y N V L S C E G C K G -
b V G T R P R A S T T M F * A A R A A R D -
c W G Q G L G L P L Q C S E L R G L Q G I -

CNBP-SRE E2A_site_consensus
ADD1/SREBP_site_(2) MRE_CS2 |
HSV_IE_repeat | MREc_(3) |
TonE_CS| | GAGA-eve_(6) | | CAC-binding-PBGD_(1)
F_consensus_(2) || | ARE MED-1| | | E2A_CS Pti4_CS |
| || | | || | | | | |
TTCTTCCGCCGCAGCGTCATCAAGGGAGCGCACTACATCTGCCACAGTGGCGGCCACTGC
361 ---------+---------+---------+---------+---------+---------+ 420
AAGAAGGCGGCGTCGCAGTAGTTCCCTCGCGTGATGTAGACGGTGTCACCGCCGGTGACG

a F F R R S V I K G A H Y I C H S G G H C -
b S S A A A S S R E R T T S A T V A A T A -
c L P P Q R H Q G S A L H L P Q W R P L P -

PUT2_UAS.2
PUT2_UAS2
MSE_consensus|
DRE/CRT_CS ||
GAL4_consensus | ||
MyoD-PRR-M-CAT | ||
OMP-undefined-site | | ||
lactoferrin_site| | | ||
AP-4/E1247-EGFR || | | ||
AP4/E1247-EGFR || | | ||
HNF-6-CS2 | || | | ||
| | || | | ||
CCCATGGACACCTACATGCGTCGCAAGTGCCAGGAGTGTCGGCTTCGCAAATGCCGTCAG
421 ---------+---------+---------+---------+---------+---------+ 480
GGGTACCTGTGGATGTACGCAGCGTTCACGGTCCTCACAGCCGAAGCGTTTACGGCAGTC

a P M D T Y M R R K C Q E C R L R K C R Q -
b P W T P T C V A S A R S V G F A N A V R -
c H G H L H A S Q V P G V S A S Q M P S G -

Sp1-TPI_(4)
glucagon-G3A |
GRE_CS7 | |
GR-uteroglobin.1 | | |
GR-uteroglobin.2 | | |
CAP-box | | | |
LVa-site| | | | |
LVa-Mo-MuLV| | | | |
GRE_CS8|| | | | |
GR/PR-connexin43|| | | | |
GR-intron-site-4 ||| | | | |
MyoD-PRR-M-CAT | ||| | | | |
GR-MT-IIA| | ||| | | | |
malT-malPp || | ||| | | | |
malT_CS | || | ||| | | | |
V_repeated_sequence| | || | ||| | | | |
Sp1-erk1_(1)| | || | ||| | | | |
RY3-CS| | || | ||| | | | |
MAZ_CS2| | || | ||| | | | |
-mdscan-motif-1 || | || | ||| | | | |
RY3-CS | || | || | ||| | | | |FlrC_RS_motif
| | || | || | ||| | | | | |
GCTGGCATGCGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGCCTGAAGAAACTGAAG
481 ---------+---------+---------+---------+---------+---------+ 540
CGACCGTACGCCCTCCTCACACAGGACAGTCTTCTTGTCTAGGCGGACTTCTTTGACTTC

a A G M R E E C V L S E E Q I R L K K L K -
b L A C G R S V S C Q K N R S A * R N * S -
c W H A G G V C P V R R T D P P E E T E A -

GC_box
Sp1-XIST_(3)
Pu_box|
Ets-1_CS|
TCF-2-alpha_CS|
PEA3_RS||
PEA3_CS||
KLF15-CS||
EKLF_CS |||
PEA3-CAMLG | |||
UASPHR_site | |||
malT-malPp AP-2-apoE-site-2 | |||
LVa-site | MAF-consensus | | |||
LVa-Mo-MuLV | AP-2_beta_CS | | | |||
Pu_box | | AP-2_CS4| | | | |||
malT_CS| | | AP-2_CS4|| | | | |||
NFE4_site || | | MTVGRE_NRS ||| | | | |||
ISGF3_RS | || | | E1A-F_CS| ||| | | | |||SDR_RS
| | || | | || ||| | | | ||| |
CGGCAAGAGGAGGAACAGGCTCATGCCACATCCTTGCCCCCCAGGGCTTCCTCACCCCCC
541 ---------+---------+---------+---------+---------+---------+ 600
GCCGTTCTCCTCCTTGTCCGAGTACGGTGTAGGAACGGGGGGTCCCGAAGGAGTGGGGGG

a R Q E E E Q A H A T S L P P R A S S P P -
b G K R R N R L M P H P C P P G L P H P P -
c A R G G T G S C H I L A P Q G F L T P P -

inding-PBGD_(1) GABP-Slp_site Thy-1-FP-VI/VII
KKLF_CS | TFIIIA_CS |MRF4-E2 Ace2-mdscan-motif-2|
| | | | | ||
CAAATCCTGCCCCAGCTCAGCCCGGAACAACTGGGCATGATCGAGAAGCTCGTCGCTGCC
601 ---------+---------+---------+---------+---------+---------+ 660
GTTTAGGACGGGGTCGAGTCGGGCCTTGTTGACCCGTACTAGCTCTTCGAGCAGCGACGG

a Q I L P Q L S P E Q L G M I E K L V A A -
b K S C P S S A R N N W A * S R S S S L P -
c N P A P A Q P G T T G H D R E A R R C P -

CAP-box
MLTF-HMGCoAred |
GCRE | |
GCN4-HIS | |
GCN4-HIS3.5 | |
GCN4-HIS4.1 | |
GCN4-HIS4.2 | |
Bas1_RS | |
MMTV-F5 | | |
Pax6_CS2 | | | |
GCN4-HIS3.2 | | | | |
GCN4-ILV1.1 | | | | |
TFIIIA_CS | | | | | |
galR_CS TEA1_CS | | | | | | |
| | | | | | | | |
CAGCAACAGTGTAACCGGCGCTCCTTTTCTGACCGGCTTCGAGTCACGGTGATGCTTCTG
661 ---------+---------+---------+---------+---------+---------+ 720
GTCGTTGTCACATTGGCCGCGAGGAAAAGACTGGCCGAAGCTCAGTGCCACTACGAAGAC

a Q Q Q C N R R S F S D R L R V T V M L L -
b S N S V T G A P F L T G F E S R * C F W -
c A T V * P A L L F * P A S S H G D A S G -

ASS-TATA
OctT3-S6-2-CS
Myb-tom-1A_(1) |
H4TF-1hist | |
Pu_box | | |
PEA3_RS| | | |
PEA3_CS| | | |
PEA3-CAMLG || | | |
UASPHR_site || | | |
Gcr1_CS | || | | |
EcR-consensus_(2)| | || | | |
p300-consensus || | || | | |
| || | || | | |
GAGACATCTCGGAGGTACAACCCTGGGAGTGAGAGTATCACCTTCCTCAAGGATTTCAGT
721 ---------+---------+---------+---------+---------+---------+ 780
CTCTGTAGAGCCTCCATGTTGGGACCCTCACTCTCATAGTGGAAGGAGTTCCTAAAGTCA

a E T S R R Y N P G S E S I T F L K D F S -
b R H L G G T T L G V R V S P S S R I S V -
c D I S E V Q P W E * E Y H L P Q G F Q L -

Brn-2_dimer_CS
ASS-TATA core-promoter-motif-7 |
yb-cyclinD2 | AP-4/E1247-EGFR | |
IRF-2_RS| | AP4/E1247-EGFR | | YY1_CS
|| | | | | |
TATAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAACCCCATCTTC
781 ---------+---------+---------+---------+---------+---------+ 840
ATATTGGCCCTTCTGAAACGGTTTCGTCCCGACGTTCACCTTAAGTAGTTGGGGTAGAAG

a Y N R E D F A K A G L Q V E F I N P I F -
b I T G K T L P K Q G C K W N S S T P S S -
c * P G R L C Q S R A A S G I H Q P H L R -

H2A_conserved_US
MMTV-F5 histone_CAP_box EBV-ZRE2
Xbp1_CS2 prolactin-D4| EBV-ZRE7 |
| || | |
GAGTTCTCCAGGGCCATGAATGAGCTGCAACTCAATGATGCCGAGTTTGCCTTGCTCATT
841 ---------+---------+---------+---------+---------+---------+ 900
CTCAAGAGGTCCCGGTACTTACTCGACGTTGAGTTACTACGGCTCAAACGGAACGAGTAA

a E F S R A M N E L Q L N D A E F A L L I -
b S S P G P * M S C N S M M P S L P C S L -
c V L Q G H E * A A T Q * C R V C L A H C -

ACE2_site
Ttk69-eve |
Swi5-mdscan-motif-1 | |
Z_box_(Zta) PHO4_consensus | | |
NF-E1.3 | CuSE_CS HRE_CS | | | |
| | | | | | | |
GCTATCAGCATCTTCTCTGCAGACCGGCCCAACGTGCAGGACCAGCTCCAGGTAGAGAGG
901 ---------+---------+---------+---------+---------+---------+ 960
CGATAGTCGTAGAAGAGACGTCTGGCCGGGTTGCACGTCCTGGTCGAGGTCCATCTCTCC

a A I S I F S A D R P N V Q D Q L Q V E R -
b L S A S S L Q T G P T C R T S S R * R G -
c Y Q H L L C R P A Q R A G P A P G R E A -

GH2
galR_CS DRE/CRT_CS
NRE_Box1_CS vs-1-core | RY3-CS HC3 RC1/RC2-CYC |
| | | | | | |
CTGCAGCACACATATGTGGAAGCCCTGCATGCCTACGTCTCCATCCACCATCCCCATGAC
961 ---------+---------+---------+---------+---------+---------+ 1020
GACGTCGTGTGTATACACCTTCGGGACGTACGGATGCAGAGGTAGGTGGTAGGGGTACTG

a L Q H T Y V E A L H A Y V S I H H P H D -
b C S T H M W K P C M P T S P S T I P M T -
c A A H I C G S P A C L R L H P P S P * P -

MEF3_CS
MIZ-1a_CS |
histone_H4_CS.2 | |
AntP_CS | | |
EcR-consensus_(2) | | | |
STE12_site | | | | |
BAS2_site | | | | | |
EBNA2-response-element | | | | | | |
TRF_RS | | | | | Crz1p_CS | | |
| | | | | | | | | |
CGACTGATGTTCCCACGGATGCTAATGAAACTGGTGAGCCTCCGGACCCTGAGCAGCGTC
1021 ---------+---------+---------+---------+---------+---------+ 1080
GCTGACTACAAGGGTGCCTACGATTACTTTGACCACTCGGAGGCCTGGGACTCGTCGCAG

a R L M F P R M L M K L V S L R T L S S V -
b D * C S H G C * * N W * A S G P * A A S -
c T D V P T D A N E T G E P P D P E Q R P -

MLC1f/MLC3f-IR
HNF-5_site |
HNF-5_CS | |
HNF-3-EGFR | |
HNF-3-rEGFR | |
HBV_TGT3_site | | | Sp1-YB1
AP-4/E1247-EGFR| | | | Tbx20-Isl1 |
AP4/E1247-EGFR| | | | MED-1| |
GCN4-ILV1.2 || | | | GR-MT-IIA || |
zeste-white || | | | Dof2_CS || |
| || | | | | || |
CACTCAGAGCAAGTGTTTGCACTGCGTCTGCAGGACAAAAAGCTCCCACCGCTGCTCTCT
1081 ---------+---------+---------+---------+---------+---------+ 1140
GTGAGTCTCGTTCACAAACGTGACGCAGACGTCCTGTTTTTCGAGGGTGGCGACGAGAGA

a H S E Q V F A L R L Q D K K L P P L L S -
b T Q S K C L H C V C R T K S S H R C S L -
c L R A S V C T A S A G Q K A P T A A L * -

E1A-F_CS
CNRE-CS-core |H2A_conserved_US
MSP_CS | | histone_CAP_box
| | | |
GAGATCTGGGATGTGCACGAATGA
1141 ---------+---------+---- 1164
CTCTAGACCCTACACGTGCTTACT

a E I W D V H E * -
b R S G M C T N -
c D L G C A R M -

Enzymes that do cut:

GCRE LVa-site MRE_CS2 NFkB_CS1 FSE2.1 GH2 APRT-CHO_US APRT-human_US
MLC1f/MLC3f-IR HC3 AP-2_CS4 PEA3_RS XRE_CS1 MTVGRE_NRS NF-E1.3
PUT2_UAS.2 PUT2_UAS2 RC1/RC2-CYC GRE_CS8 GCN4-HIS3.2 GCN4-HIS GCN4-HIS3.5
GCN4-HIS4.1 GCN4-HIS4.2 H4TF-1hist MLTF-HMGCoAred GCN4-ILV1.1 GCN4-ILV1.2
GR-MT-IIA LVa-Mo-MuLV EFII-RSV oct-B2-SV40 GR-uteroglobin.1 GR-uteroglobin.2
malT_CS MSP_CS malT-malPp histone_H4_CS.2 H2A_conserved_US JCV_repeated_sequence
zeste-white Pu_box AP-2_CS5 NRE_Box1_CS SDR_RS HSV_IE_repeat GRE_CS7
E1A-F_CS E2A_CS Ets-1_CS HNF-5_CS ISGF3_RS MCBF_RS PEA3_CS PuF_RS
TCF-2-alpha_CS HBV_TGT3_site glucagon-G3A AntP_CS T-antigen_RS TFIIIA_CS
TRF_RS CAP-box histone_CAP_box YY1_CS CNBP-SRE HNF-5_site NFE4_site
EBV-ZRE7 EBV-ZRE2 betaP-F4 betaE-F3 prolactin-D4 MREc_(3) GR-intron-site-2
GR-intron-site-3 GR-intron-site-4 MMTV-F5 CAC-bp-beta-globin-HS-3_(1)
CAC-binding-PBGD_(1) Ttk69-eve GAGA-eve_(6) Sp1-TPI_(4) Thy-1-FP-V Thy-1-FP-VI/VII
ASS-TATA EcR-consensus_(2) DSXF-FBE/_A Elk-1-CS OMP-undefined-site abaA-consensus
delta-rpL7 p300-consensus MAF-consensus Sp1-gamma-globin_(3) AP-2_site
CCAC-box CTC-element-2 E2A_site_consensus EBNA2-response-element Ets_CS
GAGA_box/CT_element GC_box lactoferrin_site GABP-Slp_site ADD1/SREBP_site_(2)
Z_box_(Zta) ASP-CYP21 TEA1_CS ARE AP-2_beta_CS TonE_CS Sp1-YB1
GR/PR-connexin43 Sp1-XIST_(3) AP-1-IL-3_(2) Myb-tom-1A_(1) Sp1-VGF_(1)
HNF-3-EGFR AP-4/E1247-EGFR AP-2-cyclinD2_(1) v-Myb-cyclinD2 HNF-3-rEGFR
AP4/E1247-EGFR AP-2-Bfsp1 PEA3-CAMLG E2A-CAMLG USF-APP AP-2-TBXAS1_(2)
Sp1-complement_factor_I Sp1-erk1_(1) ACE2_site BAS2_site GC/FAR_site_(2)
GAL4_consensus HSTF_consensus_(2) MIG1_consensus MSE_consensus PHO4_consensus
RAP1_consensus STE12_site UASPHR_site ECB_consensus T3R_TRE1_CS KKLF_CS
rSM22-alpha-TCE DRE/CRT_CS HNF-6-CS2 AP-2-apoE-site-2 Brn-2_dimer_CS Ace2-mdscan-motif-2
Swi5-mdscan-motif-1 RY3-CS MRF4-E2 IRF-2_RS SOX_CS EKLF_CS BKLF_CS
Crz1p_CS Elg_CS Erg_CS2 PEA3_CS2 core-promoter-motif-7 MEF3_CS Bas1_RS
Gcr1_CS Hac1_CS Msn2_CS Msn4_CS Tec1_CS CuSE_CS Xbp1_CS2 Mig1_CS
Hxk2/Med8_CS Pho4_CS MyoD-PRR-M-CAT Pax6_CS2 Dof2_CS Dof4_CS CNRE-CS-core
galR_CS Rap1p-broad-CS Pti4_CS HRE_CS MED-1 FlrC_RS_motif MIZ-1a_CS
BPC1_CS OctT3-S6-2-CS vs-1-core MAZ_CS2 MyoD_CS2 PU.1_CS SS5-core-site
KLF15-CS AP-4-HIV-1 Tbx20-Isl1

Enzymes that do not cut:

UAS(G)-pMH100 TFIIIC-Xls-5S.1 HSE_CS_inverted_repeat ZDNA_CS GCN4-his3-189
Ad5_EIA_element_I Ad5_EIA_element_II BPV-E2_CS1 Alb_DEI Alb_DEII Alb_DEIII
Alb_PEI BPV-E2_CS2 CACA dc_box GALV_E Pit-1_CS1 MuLV_GRBS SV40-GTI
SV40-GTII H2KBI H4siteII HCMV2 HCMV-DR1 HIV-kB HSVIE HSV-alpha-element
HSV-a'-IE-element CTF/CP1-CTF-0 mu-E1 mu-E3_(1) Ig_cd Ig_core Ig_dc
Ig_pd NF-kB-mIg-kappa LVb_RS MEP-1-MREd NFI_CS1 NFI_CS2 NFI_CS3
NFkB-k3 NFkB-PRDII kappa-E3 OCTA1.1 OCTA-mutant-8 OCTA-mutant-10 E-box_CS
OCTA3 PEBP2_RS PEA1-polyoma PE-a PE-b PRL_conserved_motif prolactin_USI
prolactin_USII SCMV-IE94-series_III AP-1-SV40 SV40-SPHII SV40-core Sp1_CS1
SRE.1 TAATGARAT TFIIIC-Xls-5S.2 TGGCA_RS alpha-TIF_CS beta-globin-CACCC-box
beta-IFN_CS cAMP_RE dGHF1_(1) GR-MMTV-IIA oriP_CS pGHF1_(1) polII_term
topoI_RS tMT-B_MREa EF-C_CS1 EFII_RS EFI-RSV-1 c-fos_SRE_half-site c-fos_SRE_1
TATA-box.2 CAAT-box.1 aP2-FSE2 MLTF-Ad-MLP FSE1 AP-2_CS1 AP-2_CS2 AP3-SV40
AP-4_CS CP1-MLP CP2-gamma-FBG NFI-NFI HNF-1_CS GRE_CS2 URS2 EivF/CRE_CS
ADH2_UAS1 XlHbox1-F1 CUP1-UASc EF-1-alpha-globin Octa1.4 Octa2.2 BGP1_RS1
HNF-1_CS2 NP_CS B1_CS B2_RS TyBF_RS GRE_CS5 ICSBP_CS cI-Op72a
MCE-DSE14 C/EBP_CS1 Amy-1_LIVa CK-1 CK-2 ERE_CS1 RIPE MHCemb-BSe
CK-8-mer TATA-box.1 Nod_box G-box GH0 GH1 JCV-GH-wt IR_(1)
EIIaE_site_B EIIaE_site_A topoII_CS his3-Tr-TATA NF-MHCIIA_RS NF-MHCIIB_RS
AP-1_CS1 CRE.2 NFI_CS4 Sp1_CS2 E2F_CS.1 AP3-IL2-siteI C/EBP-mTf AP5-SV40
EF-C.2 E2A_US E4TF1_CS EIIaE-T1 ABF1_CS engrailed_CS eve_RS1 b2-somatostatin
Lymphokine_CS COUP-ovalbuminS1 EGFR_site_2 MHCII_CS-A MHCII_CS-B MT/G-box
MRE_CS3 IL2-B-site A-alpha-Y_box E-alpha_Y_box E-alpha_X_box E-alpha_H_box
ISRE_CS ARS_CS dc_box.2 ApoCIIIp1 ApoCIIIp2 ApoCIII_NE ApoCIIId cytomeg18
cytomeg19 AP-2_CS3 PRDI_(1) huIFN-PRDII NRDI ATF_CS1 TCR-beta_decamer
Ap1-E3 Ap1-SV AP1-Col HIS-wt HIS168 GH-CSE1 GH-CSE2 GH-TRE
CYP1-UAS0 UAS1A UAS0 UAS1B Slp-FPI Slp-FPII Slp-FPIIpa Slp-FPIII
Slp-FPIIIa Slp-FPIIIb Slp-FPIV SP-A SP-B SP-C SP-D NFI-HBV-SP
SP-E CDEI CDEIII CEN6 APRT_US APRT-mouse_US CYC7-H2 MLC1f/MLC3f-DR
IgHuE1 IgHuE2 IgHuE3 Nir_box GAGA_CS HIG1_HE2 IL2R-alpha_US human_Sal_box_CS
CArG_box_CS HN1 HN2 HN3 HN4 HN5 LN1 LN2
LN3 LN4 LN5 HC1 HC2 HC4 HC5 LC1
LC2 LC3 LC4 LF-A2_RS1 rPrl-site-1P-A rPrl.B HAP1_RS NFI.1
Lam_B2_US ApoE_SRE ApoE_B1 ApoE_B2 ApoE_A CDF1_RS C/EBP_CS2 C/EBP-TTRS2
C/EBP-TTRS3 C/EBP-AT-Site-A C/EBP-AT-Site-C.1 C/EBP-AT-Site-C.2 C/EBP-SV40-1
C/EBP-DEI.1 C/EBP-DEI.2 C/EBP-SV C/EBP-MSV-1 C/EBP-PY IEF1(E3)_RS NFkB_CS2
NFkB-HIV-1.2 NFkB-b2m NFkB-HIgk NF-kB-class_I_MHC NFkB-hIL2Ra NFI.2
NFI.3 NFI.4 NFI.5 NFI.6 NFI-cmycII1 NFI-cmycII2 NFI.7 NFI.8
NFI.9 NFI-wt NFI.10 NFI.11 NFI.12 NFI.13 NFI.14 NFI.15
NFI.16 NFI-CSLa1,1 NFI.17 CTF NFI-tkII NFI.18 CRE-Ga Ga-URE
IL2_CS LysHREI LysHREII LysHREIII LysHREIV LysHREV LysHREVI LF-A1_RS1
LF-A2_RS2 LF-B1_RS LF-B2_RS LF-C_RS UBP1_RS EBP1_RS GRF1_RS CabE_PRE
c-GC-box SP1-IE3/34 SP1-SV3/5 SP1-DHFR.1 SP1-IE3/1 SP1-IE3/2 SP1-TK/2 SP1-SV/2
SP1-SV/4 SP1-SV/6 SP1-SV/1 SP1-TK/1 E4-160R.O E4-45R.D ITRN63.O ETFA-E2
AAVN.160.O AAVN.170.D AAVN.210.D PEPCK-80.D ETFA.2 ETFA.3 GCF2-EGFR
ETF_RS2 TfPRI TfPRII TfDRI TfCR Ad_DPS Ad_DPS.2 alpha-2-STE6.1
alpha-2-synRS.1 alpha-2-synRS.2 alpha-2-BAR1 alpha-2-STE2 alpha-2-MFa1
alpha-2-ha-2-MFa2 alpha-2-CS globin-wt-G-string OR(1) beta-glob-CACCC
HNF-1_RS A2vit_RE1 A2vit_RE2 A2vit_RE3 AP2-SV40.0 AP2-Hmt2a1 AP2-Hmt2a2
AP2-Hmt2a3 AP2-HgH1 AP2-HgH2 AP2-Hcmyc1 AP2-Hcmyc2 AP2-BPV.1 AP2-BPV.2
AP2-H2Kb1 Ap2-H2Kb2 AP2-H2Kb3 beta/epsilon-GATA.2 rho-promoter-GATA beta-H-GATA
alpha-D-GATA pi-GATA alpha-A-GATA.1 alpha-A-GATA.2 alpha-A-GATA.3 PEA1_RS
PEA2_RS PEB1_RS EF-C_RS XRE_CS2 XRE-1 XRE-2 EivF_CS ICS_(1)
ICS-H2Ld ICS-H2Kb ICS-H2Dd ICS-b2m ICS-HLADR ICS-HLAA3 ICS-MTII ICS-FacB
ICS-ISG15 ICS-ISG54 ICS-6-16 ICS-os ICSbf_CS APF-alb1 APF-alb2 APF-alb3
APF-alb4 APF-alb5 APF-alb6 APF-AFP1 APF-AFP2 APF-AFP3 APF-AT APF-FIB1
APF-FIB2 APF-PK APF-HG APF_CS EBP1_RS.2 COUP-ovalbumin COUP-VLDL
UAS1.3 UAS1.1 UAS1.2 TFIID-EIIa UCE.1 UCE.3 rRNA_UScor E3I_RS
E3II_RS E3III_RS E3IV_RS HLAII.Xbox HLAII.Ybox NFBK.1 NFBK.2 NFBK.3
NFBK.4 NFBK.5 NFBK.6 NFBK.7 NFBK_CS NFIII-Ad2 NFIII-Ad4 NFIII-SA7
NFIII-Ad12 NFIII-Ad40 NFIII-Ad41 HNFI-alpha-Fib HNFI-beta-Fib HNF1-alpha-1-AT
UAS2UP1 NF-Y_CS alpha-1-AT-X-Hapt alpha-1-AT-X-core alpha-1-AT-X-RBP
NFY-E-alpha TRE-col TRE-stromelysin TRE-hMTIIA TRE-polyoma.1 TRE-polyoma.2
AP1-IL2 AP-1_CS2 NF-E1_CS1 NF-E1.1 NF-E1.2 NF-E1.9 NF-E1.4 NF-E1.5
NF-E1.6 NF-E1.7 NF-E1.8 IL2R-alpha-kB XY_CS.1 XY_CS.2 CArG_CS CArG-hcact
CArG-fos_(1) CArG-xcact CArG-csact CArG-hsact CArG-hs1 CArG-hs2 CArG-hs3
CArG-hc1 CArG-hb1 SkA-SRE1 CArG-sc1 CArG-fos_(2) S1_HS CRE-fos CRE-PE
CRE-VIP CRE-som ENKCRE-1_(1) UASt HNF1_RS MRE_CS5 ADH2.1 ADH2.2
CREB-Som CREB-fos CREB-proenkephalin CREB-hsp70 CREB-TH CREB-FN CREB-PEPCK
CREB-VIP CREB-PTH CREB-ACG CREB-E2A CREB-E3 CREB-E4 CREB-HTLV-II CREB-BLV
CREB-CMV CREB-IAP CREB_CS1 CuE1.1 CuE2.1 CuE3.1 CuE4.1 CuE1.2
CuE3.2 CuE4.2 CuE2.2 CuE3.3 IgPE2_RS CuE4.3 CuE2.3 CuE1.3
CuE3.4_(1) TEF1-SphI TEF1-SphII TEF1-GTIIC TEF1-GTI* TEF1-Pywt TEF1-PyEC9
TEF2-GT-I ERE.cvitII GRE.cvitII DRE.cvitII beta-pol_CS beta-pol_RS PUT2_UAS.1
uEBP-E_CS HSV/AT HSV-IE110(3)-TAATGARAT HSV-IE110(2)-TAATGARAT HSV-IE110(1)-TAATGARAT
HSV-IE175(2)-TAATGARAT HSV-IE175(1)-TAATGARAT AT-alpha-27.1 AT-alpha-27.2
AT-alpha-47.1 AT-alpha-47.2 AT-alpha-47.3 AT-SV40 AT-MSV AT-SR_CS AT-beta-INF
AT-hsp AT-LC AT-E1A AT-tk AT-beta-globin AT-Alu CBAR eve_CS1
eve_CS2 PUT2_UAS1 STE2.1 STE2.2 STE6.1 STE6.2 BAR1.1 BAR1.2
MFa1.1 MFa1.2 MFa2.1 MFa2.2 MAT-alpha-2_CS1 MAT-alpha-2_CS2 MAT-OCTA1
MAT-OCTA2 HO/-411 HO/-736 MAT-alpha-1_RS MATa1/alpha-2CS a-actin_US actin_5c_US
(SRF)-actin Ad2MLP-UE_(US.1) Ad2MLP_US.2 Ad2MLP_US.3 Ad2MLP_US.4 Ad2MLP_US.5
Adh_US1 Adh_US2 Adh_US3 Adh_US4 Adh1_US2 Adh1-A Adh2_US Albumin_US1
NFI-albumin Albumin_US2 Albumin_US3 adip-P2_US1 BPV_En.1 AP2-BPV.3 NFI_CS5
AP1-col.3 CYC1-region-A HAP1-CYC1 RC2-CYC1.1 RC1a/RC2-CYC RC2-CYC1.2 CYC7_US1
CYC7_US2 Sp1-DHFR.2 Sp1-DHFR.3 E1a.1 E1a.2 E2E1a E2F-E1a EIIaE-CaEI
EIIaE-CbEI EIIaE-T1.2 EIIa-EF/EP EIIaE-BEII (E2)-EIIaE1 E2F-EIIaE1_(1)
EIIaE-AEII E2F-EIIaE1_(2) EIIF-EIIaE1 EIIaE1_US EIIaE1.2 Ga/CRFEII GaEII-late
USF-IIEII Sp1/CRF-EII Sp1-EII-lat E4F1-E4 E4F1-E4.1 EF-1-alpha/TEF1_US1
EF-1-alpha/TEF2_US1 SCR-indf-c-fos f-EBP-fos c-fos_SRE_2 c-fos.5 c-fos_US5
c-fos.1 c-fos.2 c-fos.3 c-fos.4 GAL4-depGAL GAL4-GAL1-1.3 GAL4-GAL1-1.2
GAL4-GAL1-1 GAL4-GAL1-1.4 GAL1-TATA GAL4-depGA GAL2_US2 GAL4-GAL2.1 GAL4-GAL7.1
GAL4-GAL7.4 GAL4-GAL7.5 GAL4-GAL80 CTF/NF-1a aD-globin-CS2 aD-globin-B
aD-globin-A beta-globin-CACCC CTF/NF-1b bA-globin.1 bA-globin.2 bA-globin.4
GH-site_2 GH-site_3 AP2-GH.1 AP2-GH.2 hGH-site-II GHF-1-GH-site_2a GHF-1-GH-site_1
GR-hGH_(1) T3rec-GH GC2-GH-CS Pit-1-pGHF1 HBVE-UE3 HBVE-UE2 HBVE-UE1 HBVE-E_site
GCN4-HIS3.1 GCN4-HIS3.3 GCN4-HIS3.4 HIS4_RS GCN4-HIS4.3 GCN4-HIS4.4 histone-H2B-US
OBF-histone OBF-H2B1 (TFIID/TBP)-H2B1 B-factor-H3_(1) histone_H4.1 HiNF-Ahist
histone_H4.2 B-factor-H3_(2) Sp1-HIV-1.1 Sp1-HIV-1.2 Sp1-HIV-1.3 HMGCoAred_FP1
HMGCoAred_FP2.1 HMGCoAred_FP3 HMGCoAred_FP5 HMGCoAred_FP6 SBF-E-HML SBF-B-HMR
SBF-E-HMR HSTF-hsp70.1 HSTF-hsp70.2 HAP-hsp70 HSTF-hsp70.3 HSTF-hsp70.4
HSTF-hsp70.5 HSTF-hsp70.6 HSTF-hsp70.7 HSTF-hsp70.8 TAB-hsp70 B-factor-hsp70
heat-indf-hsp70 HSTF-hsp70.9 HSTF-hsp70.10 CTF/CBF-hsp70 hsp70.4 hsp70_US
hsp70.5 Sp1-hsp70 hsp70.2 (TFIID/TBF)-RS HAP-hsp83 TAB-hsp83 HTLV-pa-BS.3
HTLV-pA-BS.1 HTLV-pA-BS.2 NFI-IE1.1 NFI-IE1.2 NFI-IE1.3 NFI-IE1.4 IE1-I
IE1.2 IE1.1 NFI-IE1.5 alpha-4_RS1 alpha-4_RS2.1 Sp1-IE-3.1 Sp1-IE-3.2
Sp1-IE-3.3 Sp1-IE-3.4 Sp1-IE-3.5 Sp1-IE-4/5 Sp1-IE-4/5.2 GCN4-ILV1.3 GCN4-ILV2
IgNF-A-IgH_(1) IgHC.1 NF-A1-IgHC NF-A2-IgHC IgHC.2 NFuE1-IgHC IgHC.20
IgPE-1-IgH IgHC.4 NFuE3/GTII IgHC.8 IgNF-A-IgH_(2) IgPE-2-IgH IgHC.11
IgHC.12 IgHC.13 IgHC.14 IgHC.15 IgPE-3-IgH IgHC.16 IgHC.21 IgHC.17
IgHC.18 IgHC.19 NFkB-IgkLC IgNF-A-Igk NF-A1-IgkLc NF-A2-IgkLc IgkLC-1
unknown-insulin rInsulin-flat-element INS_US.1 R2-b-IFN.1 R1-b-IFN ITF-b-IFN
60k-protein_RS1 60k-protein_RS2 IgPE-2-LPV-wt GR-lysozym.1 PR-lysozym GR-lysozym.2-1
PR-lysozym.2-1 GR-lysozym.3 lysozyme-TATA GAL4-MEL1 Sp1-MT-I.1 MT-I.1
(Sp1)-MT-I.1 MT-I.2 (Sp1)-MT-I.2 MT-I.3 MT-I.4 MT-I.5 MT-I.6
AP2-MT-II.1 AP2-MT-II.2 MT-IIA-BLE-1 AP2-MT-II.3 AP1-MT-II PRTF-MFa1 dirF/MATa1.1
PRTF/MATa1.2 PRTF/MATa1.3 MHCI/H2K AP2-MHCI KBF1-MHCI MHCI/H2K.2 Bfactor-MH
x-box-bp-MHCII DQ-beta-US1 KBF1-beta2-microglobulin MMTV-NF-I_RS GR-MMTV.01
GR-MMTV.02 GR-MMTV.03 GR-MMTV.1 GR/PR-MMTV.2 GR/PR-MMTV.3 GR/PR-MMTV.4
GR/PR-MMTV.5 GR-MMTV.04 GR-MMTV.05 GR-MMTV.06 GR-MMTV.07 NFI-MMTV GR-MMTV.08
GR-MMTV.09 GR-MMTV NFI-Mo-MuLV.2 LVb-Mo-MuLV Mo-MuLV NFI-Mo-MuLV.1 (GR)-Mo-MuLV
c-mos_DS1 c-mos_DS2 c-mos_DS3 IgPE-1-MSV C/EBP-MSV-2 AP2-c-myc.1 AP2-c-myc.2
COUP-ovalbuminS2 UAS-PGK_RS Py-alpha.1 PEA-2-poly PEA2-polyoma PEB1-polyoma
polyoma.4 polyoma.3 polyoma.2 T-Ag-Py.1 C/EBP-polyoma GT-IIc-Py-wt EF-C-polyoma
T-Ag-Py.2 T-Ag-Py.3 T-Ag-Py.4 T-Ag-Py.5 T-Ag-Py.6 rPRL-FPIV rPRL-FPIII
rPRL-FPII rPRL-FPI PUF-1-prolactin qa-1F-qa-2.1 qa-1F-qa-2.2 qa-1F-qa-2.3
qa-1F-qa-4.1 qa-1F-qa-4.2 qa-1F-qa-3.1 qa-1F-qa-3.2 qa-1F-qa-3.3 qa-1F-qa-y.1
qa-1F-qa-y.2 qa-1F-qa-y.3 qa-1F-qa-1.1 qa-1F-qa-1.2 Sp1-ras1.1 Sp1-ras1.2
Sp1-ras1.3 Sp1-ras1.4 Sp1-ras1.5 Sp1-ras GT-I-rbcS-.1 GT-I-rbcS-.2 GT-I-rbcS-.3
GT-I-rbcS-.4 TUF_CS1 TUF_RS TUF-RP/RP5.1 TUF-RP/RP5.2 TUF-RP/S33 EFI-RSV-2
CRE-somatostatin PRTF/MATa1.4 HBsAG-US LSF-SV40 Sp1-SV40.2 Sp1-SV40.3 Sp1-SV40.4
Sp1-SV40.1 AP1-SV40.1 SV40.1 AP1-SV40.2 SV40.2 OBF-SV40.1 SV40.3
SV40.4 SV40.5 SV40.6 SV40.16 TRE-SV40 SV40.7 OBF-SV40.2 SV40.8
oct-B1A-SV40 oct-B1B-SV40 oct-B3-SV40 SV40.9 AP2-SV40.1 AP2-SV40.2 SV40.10
AP2-SV40.3 SV40.12 C/EBP-SV40-2 SV40.13 AP3-SV40.1 AP3-SV40.2 SV40.14
GT-IIC-SV40 SV40.15 GT-IIBa-SV40 GT-IIBb-SV40 GT-IIA-SV40 Sp1-tk.1 CTF/NF-I-t
Sp1-tk.2 tryp-oxy_GRE.1 tryp-oxy_GRE.2 TAT-distal-GRE TAT-prox-GRE U1BsnRNA
U2snRNA.1 Sp1-U2snR.1 (Sp1)-U2snR.2 (Sp1)-U2snR.3 Octa-U2snRNA OBF-U2snRNA
U5snRNA U5snRNA.2 PR-uteroglobin-1 PR-uterogl.2 PR-uterogl.3 PR-uterogl.4
PR-uteroglobin-2 GR/PR-uteroglobin.1 PR-uterogl.6 PR-uterogl.7 vaccinia-early-US
ER-c-vit vitellogenin.1 WAP_US1 WAP_US2 WAP_US3 WAP_US4 WAP_US5 WAP_US6
CuE1.4 kappa-E2.1 CuE3.4_(2) CuE5 E1A_element_II E1A_element_I.1
ATF_RS E3-binding_site_IV E3-binding_site_III CREB-E3.2 FSE2 GAPD_initiation_site
ADH_US2 HP1-syn0 AAT_USFP AAT_US3 E2_RS1 E2_RS2 ovotransferrin_S_element_1
ovotransferrin_S_element_2 XRE-cyt450_RS CytR-galO(E) CytR-deoP-2 SRF_CS1
GAL4_CS3 galE_operator_CS cuticle-gene-US reductase_US1 EARLY-SEQ1 SP1_CS3
HSP/LSP_CS biosynthetic_repeated_sequence beta-A_globin_B'_site vit-B1_ERE
CAP/CRP-gal Ad-conserved-sequence-a Ad-conserved-sequence-e CAP/CRP_CS1
CAP/CRP-lac CAP/CRP_CS2 CAP/CRP_CS3 CAP/CRP_CS4 CAP/CRP-lac_site_1 CAP/CRP_CS5
Amy-2A_conserved_seq araC_CS Arg_box_CS CAR_US1 chorion_upstream_CS Gld_YYRR_sequence
HO_site leu2_US alpha-factor_stim_element alpha1/alpha2_element_CS SOD-1-GC-hexamer
TTR_inverted_repeat Tg-DRE AP1-transferrin_receptor b-alpha1-tubulin_US
tufB_wt_promoter MFA1_alpha-2_element C4-(G)18CGGGTGG CACA-pseudobeta-2
copia_HSE1 HSE_CS copia_HSE2 HSE-hsp23 HLA_DQ-beta_US H-2Kb-sequence-VII
H-2Kb-sequence-V-repeat H-2Kb-sequence-IV H2B-CCAAT H2B-specific_CS H1_conserved_US
H1-box histone_H4_CS HO_CS H1-TATA ICP4_CS IEmRNA-4/5_US IEmRNA-4/5_start
IEmRNA-4/5_DS IgH-heptamer cd_element_CS Ig-kappa.1 dc_element_CS Ig-kappa.2
pd_element_CS Ig-dc.2 Ins-IEF1 INF.1 TGGCA_CS1 lysozyme_E-0.2kb MRE_CS6
hMTIIa-GRE MRE_CS4 MRE_CS7 sigma-54-glnAp2 nitrogen_regulatory_CS ntrC_CS
nif_promoter_CS1 nif_promoter_CS2 NR(I)_CS nodulin_consensus_A RS_RNA_5'_CS
RS_initiation_site mouse_Sal_box_CS T3-box 16S/32S_rRNA.1 UAS(rpg)_CS
RPG-box U4B-octa LexA_CS1 LexA_CS2 GRE_CS4 RUG1 GR-lysozyme-1 GR-lysozyme-2
PR-ovalbumin ER-cvit RUG2 SV40-late-US1 HSV-tk-2nd_distal_signal Sp1-TK-dsII
(Sp1)-TK.2 HSV-tk-1st_distal_signal uteroglobin_HS-2.4_CS Sindbis_subgenomic_promoter
satDNA.1 ERE_CS vit-ERE vit-p17-ERE vaccinia-term-sequence vaccinia_F10_DS
oli1_DS yeast-termination-CS1 yeast.term.2 lambda-boxA_(1) lambda-boxA_CS
lambda.c retroviral_TATA 28S_RNA_termination_CS rRNA-T2/T3 yeast-termination-CS2
rDNA_spacer_CS lambda.d EBV.IR1_US1 E2_RS.1 E2_RS.2 E2_RS.3 E2_RS.4
E2_RS.5 E2_RS.6 E2_RS.7 E2_RS.8 E2_RS.9 E2_RS.10 E2_RS.11 E2_RS.12
E2_RS.13 E2_RS.14 E2_RS.15 E2_RS.16 E2_RS.17 HMGCoAred_FP4 GAL2_US1 GAL10_US1
GAL10_US2 GAL10_US3 GAL1_US1 GAL7_US1 GAL7_US2 GAL7_US3 MEL1 GAL80_US1
GAL4_CS1 GAL4_CS2 E2F-myc E2F-Ad5-E2a E2F-Ad5-E1a.1 E2F-Ad5-E1a.2 E2F-Ad12-E1a
E2F_CS.2 HSE-hsp70 E4F1_CS E4F1-E4.2 E4F1-E4.3 E4F1-E4.4 E4F1-E4.5 E4F1-E1A.1
E4F1-E1a.2 E4F1-E1a.3 E4F1-E2 E4F1-E3 GR-MTV-I GR-HMT-IIaI GR-RUG-I GR-RUG-II
GR-MRib GR-RUG-III GR-MTV-IIA GR-DSC7 GR-CLYS-I GR-CLYS-II GR-rTAT-I
GR-rTAT-II GR-hGH-I GR-CVIT-II GR-rTO-I GR-rTO-II GR-MSV-I GR-MSV-II GR-MSV-III
GR-COV-I GR-HMTIIa-II GRE_CS1 Adf-1-Adh Adf-1-AntpP1 DBF-1-ddc DBF-1-Ubx
dFRA-hmtIIA dJRA-hmtIIA DTF-1_RS1 DTF-1_RS2 GAGA-Ubx GAGA-en HSE-pHT5
zeste-Ubx AbdB-r_RS1 AbdB-r_RS2 Antp-Ubx bicoid-hb engrailed_RS eve_RS2
eve_RS3 ftz-Ubx ftz_RS1 paired_RS1 Ubx-Ubx zen_RS1 CP1_CS CP2_CS
CP1-MLP.2 NF-I_CS GRE_CS3 ERE_CS2 EcRE TR-TRE1 GRE(-) nGRE.1
nGRE.2 nGRE.3 nGRE.4 nGRE.5 nGRE.6 nGRE.7 PLF_US1 nGRE.8
nGRE.9 GR-MMTV.10 GR-MMTV.11 GR-MMTV.12 GR-MMTV.13 GR-MoMSV.1 GR-MoMSV.2
GR-MoMSV.3 GR-MuRFV.1 GR-MuRFV.2 GR-MuRFV.3 GR-G/A-FLV.1 GR-G/A-FLV.2 GR-G/A-FLV.3
GR-visna.1 GR-visna.2 GR-visna.3 GR-visna.4 GR-HuEnRV4-1.1 GR-HuEnRV4-1.2
GR-HuEnRV14-1.1 GR-MuEnRV14-1.2 GR-HIV1.1 GR-ARV-2.1 EIIaE-A EIIaE-T2
EIIaE-B' EIIaE-B EIIaE-C aD-globin-US GC2-GH-NCS IE1-II IE1-III IE1-IV
IE1-V IE1-VI IE1-VII IE1-VIII IE1-IX R2-b-IFN.2 GR-lysozym.2-2
PR-lysozym.2-2 IgPE-1-Py IgPE-2-LPVmut1 IgPE-2-LPVmut2 IgPE-2-LPVmut3 IgPE-2-LPVmut4
GT-IIc-Py-EC9.1 IgkLC-2 MREd_(1) MREc_(1) T-Ag-SV40-I T-Ag-SV40-II T-Ag-SV40-III
GAL4-GAL2.2 GAL4-GAL7.2 GAL4-GAL7.3 GAL2_ds MHC-CRE CArG-MCK AP2-MCK
kappa-MCK MEF1-MCK A-rich-MCK NTF-1-I NTF-1-II NTF-1-IIIa NTF-1-IIIb NTF-1-IV
hCuE1 C/EBP-RS C/EBP-RSV C/EBP-RSV.2 c-Myc_RS1 GLI_RS Hepta APRE
deltaE1_(1) deltaE2 deltaE3 deltaE4_(1) deltaE5 deltaE6_(1) deltaE7
myc-PCF_CS MLTF_RS NF-AT-IL-2 mu-E5 NFAT-HIV.1 NFAT-HIV.2 CREB-HTLVI.1
CREB-HTLVI.2 CREB-HTLVI.3 CYP21B_US AP1-col_wt AP1-col_syn AP1-osteocalcin
AP1-histoneH3.2 AP-1_CS3 TRE.2 TRE.1 AP1-HIV DFSE2 DGALVEN TRE-cjun.1
TRE-cjun.2 TRE-GPEI.1 TRE-GPEI.2 TRE-EBV-ZRE AP1-SCC AP1-cfos AP1-TRE-2/T
AP1-TRE-1/C AP1-TRE0/C AP1-TRE-4/T AP1-TRE+4/C AP1-TRE+4/A AP1-TRE-1/T
AP1-TRE0/A AP1-TRE-4/G AP1-TRE-4/C AP1-aP2 AP1-GALV AP1-PBGD NF-E2_CS
AP1-IL3 AP1-ET-I AP1-HPV16 AP1-HPV16-fp4e1 AP1-HPV16-fp9e AP1-JE AP1-TGF-beta1.1
AP1-TGF-beta1.2 AP1-HIV.1 AP1-HIV.2 AP1-HIV.3 AP1-HIV.4 AP1-TGF-beta TRE-Egr-1.1
TRE-Egr-1.2 TRE-Py MLTF-L-PK MLTF-chymotrypsin MLTF-fibrinogen MLTF-hGH
MLTF-pB48 MLTF-HHO MLTF-mMT-I MLTF-TFIIIA MLTF-mMT1 MLTF-L-PK.2 MLTF-HCMV
MLTF-Ad2IVa2 MLTF-AAVP5 MLTF-TS MLTF-hU1snRNA MLTF-H5 MLTF-hGH.2 NFkB-HCMV-18R
NFkB-MHCclassII NFkB-IL2 NFkB-HIV-pol NFkB-MHCclassI NFkB-TNF-alpha NFkB-TNFaCK1
NFkB-TNFa-K.1 NFkB-TNFa-K.2 NFkB-TNFa-K.3 NFkB-IL6 NFkB-MHC-I.2 NFkB-HCMV-AP18
NFkB_CS3 NFkB_CS4 NF-kB-APRE mu-B.1 mu-B.2 PU-MHC_II_I-Ab E1A_element_I.2
element_II_rs-2 element_II_rs-3 element_II_rs-4 Xl_g-actin_SRE galE-O(E)
galE-O(I) HSP_TS LSP_TS CRP-galO CRP-lac-1 CRP-lac-2 CRP-gal-1 CRP-gal-2
CRP-gal-3 CRP-ara-1 CRP-ara-2 CRP-ara-3 CRP-ara-4 CRP-ara-5 XRE-2.2 Elastase_II_CS
AraC-araO(1) ICP4-gD ICP4-pBR-1 ICP4-pBR-2 TGGCA-BS1a TGGCA-BS1b TGGCA-BS2
GR-hGH_(2) NR(I)-glnA-1 NR(I)-glnA-2 NR(I)-glnA-3 NR(I)-glnA-4 NR(I)-glnA-5
element_II-rs-1 TATA-box-CS CAAT-box.2 GC-box enhancer_core_(1) AP-3_RS
GT-IIB/Pvu_box globin-3'_conserved_sequence fos-BLE-2 SIS-RE IFN-inducible_CS
VRE(IFN-alpha)-repA VRE(IFN-beta)-NE VRE(IFN-alpha)-repB NRE_Box2_CS Lysozyme-N-0.25
Myc-CF1_RS GRE_CS6 TSE TIE_(1) SV40_Pu-box HIV-NRF_RS fPyF9_Box-DNA_CS
Ad-Enh.3 HSV_late_TATA_box hAFP_box_I LF-A1_RS2 tf-LF1_CS LF-B1_CS alpha-1-AT-B
C/EBP-TTR-2 C/EBP-TTR-3 C/EBP-alpha-1-AT-A C/EBP-alpha-1-AT-C C/EBP-SV40_core-C
C/EBP-Albumin-DE-I C/EBP-Gene_248(1) C/EBP-SCD1 LTF-E-Hep.B-E Alb-PE
Pancreatic_CS UCR_core mu-E4 kappa-E2.2 SCD1/BP_RS Myc-PRF_RS Anteriory_Pituitary_ES
NF-E1_CS2 IEB1 bicoid_RS bicoid_CS HSTF_CS1 PEA1_CS AP-4_RS Hox-1.3_RS
TR-TRE2 GCN4_CS1 GCN4_CS2 HSTF_CS2 RAP1-HMRE MAT-alpha-2_CS3 MAT-alpha-2_CS4
P-Box-alpha-CS P-Box-a-CS Q_Box_CS qa-1F_CS1 RAP1-TEF2 AABS_CS1 AABS_CS2
ABRE E6_element_(1) HIV_URE-1 HIV_URE-2 HNF1-HP1 HSTF_CS3 NF-IL6_RS
KROX24_CS KROX24-F GR-IL6 IL2-dOct PhyA-response_element RAD_CS XIB-SV40
Y_box_(1) hAFP_box_2 IEB2 NF-IL2-A_RS E4TF1-E4 E4TF3-E4.1 E4TF3-E4.2
E4TF3-E4.3 E4TF3-E4.4 GT-rice GT-rice/oat GT-oat GT-pea NFkB-TCR-beta
NFkB-IL2Ra.1 NFkB-IL2Ra.2 NFkB-MHCI-H2Kb.1 NFkB-MHCI-H2Kb.2 NFkB-MHCI-H2Kb.3
NFkB-IC-li NFkB-GMCSF NFkB-TNF-alpha.1 NFkB-TNF-alpha.2 NFkB-LT.1 NFkB-LT.2
NFkB-LT.3 NFkB-LT.4 NFkB-APRE NFkB-vimentin RF-X_RS bicoid_wt_RS bicoid_mutant_2
bicoid_mutant_5 Antp_wt_RS bicoid-antp-18 bicoid-antp-21 bicoid-antp-25
bicoid_mut_9 bicoid_mut_10 bicoid_mut_11 bicoid_mut_12 bicoid_mut_13 bicoid_mut_14
Antp_wt_RS.2 Antp_mut_20 Antp_mut_24 bicoid-X1 bicoid-X2 bicoid-X3 bicoid-A1
bicoid-A2 HNF-4_CS HNF-4-TTR HNF-4-HNF4P HNF-4-HNF4D HNF-4-apoCIII HNF-4-alpha1-AT
Pit-1_CS2 Pit-1-PlPPal Pit-1-PitB1 Pit-1-PitB2 Pit-1-pGH Pit-1-dGH Pit-1-P3D
Pit-1-P1P Pit-1-P1D Pit-1-P3P Pit-1-P2D Pit-1-P2P Pit-1-P4P Pit-1-P4D Pit-1-PRL-1
TFIID-MLP TFIID-CYC1-1 TFIID-CYC1-2 TFIID-LEU2-1 TFIID-LEU2-2 TFIID-CYC1/MLP
TFIID-SV40/MLP glass-Rh1 NF-1-IE94.23 NF-1-IE94.22 NF-1-IE94.21 NF-1-IE94.20
NF-1-IE94.19 NF-1-IE94.18 NF-1-IE94.17 NF-1-IE94.16 NF-1-IE94.15 NF-1-IE94.14
NF-1-IE94.13 NF-1-IE94.12 NF-1-IE94.11 NF-1-IE94.10 NF-1-IE94.9 NF-1-IE94.8
NF-1-IE94.7 NF-1-IE94.6 NF-1-IE94.5 NF-1-IE94.4 NF-1-IE94.3 NF-1-IE94.2
NF-1-IE94.1 FTZ-F1_RS FTZ-F1_RS2 junB-US1 junB-US2 junB-US3 ftz-CON ftz_CS2
Ubx-dpp GAGA-kruppel.1 GAGA-kruppel.2 GAGA-kruppel.3 GAGA-kruppel.4 GAGA-kruppel.5
GAGA-kruppel.6 VETF-VGF1 c-Myb-F3-L c-Myb-F3-H c-Myb-F5L c-Myb-F5-H c-Myb-F1-L-1
c-Myb-F1-L-2 c-Myb-F1-L-3 c-Myb-F1-H c-Myb-F4-H c-Myb-F4-L ILF-HIV.1 ILF-HIV.2
lambda-boxA_(2) 21-boxAr lambda-Al 21-boxAl rrn-boxA beta-casein-FP1 beta-casein-FP2
EF-1A-site_A EF-1A_CS IHF-L1 IHF-L2 EBP-80-enh2-up EBP-80-enh2 UAS(G)-pSV3
XylR-UBS1 XylR-UBS2 XylR_CS1 XylR_CS2 XylR_CS3 TetR-O1 TetR-O2 MetJ-16mer
MetJ-MetF MetJ-MetC MetJ_RS Ner_operator_IS NifA-UAS3 MerR-mer_promoter
OmpR-ompC-a OmpR-ompC-bc AlgR1-algD_US1 AlgR1-algD_US2 ArgR-carAB_arg-box-1
ArgR-carAB_arg-box-2 BlaI-P(p)1 BlaI-P(p)2 BlaI-P(i) deoR-deoO(E) deoR-deoO(1)
deoR-deoO(2) FNR_CS MalT_CS MalT-malE(2ek) MalT-malE(1ek) MomR/OxyR_CS
MomR/OxyR-mom RafR-rafO(1) RafR-rafO(2) SBS-1A SBS-1B GSG_element_(1)
Oct-2-A Oct-2-B Oct-2-C Oct-2-D alpha1(I)-collagen-FP1 alpha1(I)-collagen-FP2
beta-RARE Myogenin_CS (Myogenin)_CS Ucp-DNAseI-HS4-CRE MHC_class_I_silencer
MHC_class_I_enhancer silencer_binding_site_1 silencer_binding_site_2 rPOMC_DE-4
rPOMC_DE-3 rPOMC_DE-2 rPOMC_DE-1 rPOMC_CE-2 rPOMC_CE-1 rPOMC_PE-4 rPOMC_PE-3
rPOMC_PE-2 rPOMC_PE-1 MCK-kE2 RAP1-HIS4 MLC(1/3)-MRE GATA-1-GATA-1 PGK-1-GC_box1
PGK-1-US PGK-1-NF1-like_US PGK-1-CCAAT PGK1-GC-box2 X_box_(1) Y_box_(2)
alpha-actin-CaSRE3 Evi-1_CS gERE C/EBP-cVITII Sp1-cVITII TF-V-beta-cVITII
USF-cVITII c-fos_SRE_3 ARGRII-CAR1 ARGRII-CAR2 ARGRII-ARG5/ARG6 ARGRII-ARG3
ICE1 Pcp-2-rat-NSE_sequence EMF-1-M1 EHSE URS-SSA1 Prl-1P HCMV_MIE_conserved_sequence
HCMV_MIE_FP1 HCMV_MIE_FP2 EBV_BamHI-C_conserved_sequence c-Myc_RS2 cell-cycle-responsive_UAS
eve-stripe2-kr6 eve-stripe2-kr5 eve-stripe2-bcd5 eve-stripe2-gt3 eve-stripe2-bcd4
eve-stripe2-gt2 eve-stripe2-bcd3 eve-stripe2-bcd2 eve-stripe2-gt1 eve-stripe2-bcd1/kr3
eve-stripe2-hb3 eve-stripe2-kr2 eve-stripe2-hb2 eve-stripe2-kr1 eve-stripe2-hb1
TFII-I-TdT-Inr TFII-I-ML-Inr1 TFII-I-ML-Inr2 TFII-I-HIV-1-Inr1 TFII-I-HIV-1-Inr2
YY1-P5 YY1-TdT YY1-LeIF-J HNF-1-alpha-C_site HNF-1-alpha-B2-site HNF-1-alpha-B1-site
HNF-1-alpha-A-site MuLV-GRE Inr_(1) Mut.Inr MyoD-MCK-right_site MyoD-MCK-left_site
UCR-MHC-I H-2RIIBP-region-II H-2RIIBP-vit-B-1 H-2RIIBP/T3R-alpha-region-II
H-2RIIBP/T3R-alpha-vit-B-1 V-beta-CRE NBRE HF-1 VL30-VLX VL30-VLY
CP1-alpha-globin CP1-H-2K(b) CP1-HSP70 CP1-UAS2UP1-CYC1 CP1-MSV-LTR CP1-MOPC-41-V(k)
CP1-beta-globin CP1-tk GAS_(1) SDRE_(1) AhR-XRE1 3MC-inducible-GST-Ya_site
HNF1-GSTYa HNF4-GSTYa NLS-GSTYa AAF_RS AhR_RS AGIE-BP1_RS ANF_RS
AP-1_CS4 AP-3_CS AR_CS ARP-1_RS ATF_CS2 BGP1_RS2 BSAP_CS CBF_RS
CBP-1_CS CD28RC_RS COUP_RS DBP_RS E2BP_CS E2F_CS E4F_RS E4TF1_RS
EF-1A_RS EGR-1_CS EGR-2_RS ELP_RS v-ErbA_RS ETF_RS3 F-ACT1_RS GAF_RS
GR_CS H1TF1_RS H1TF2_RS H2RIIBP-vitERE H4TF1_RS H4TF2_CS H-APF-1_RS
HiNF-A_RS HNF-3_CS IAF_RS Ig/EBP1_CS IREBF-1_RS ISGF1_RS ISGF2_RS Ker1_RS
LBP_RS LIT-1_RS LSF_CS LSF_RS MBF-1_RS MBF-I_CS MEF-2_CS MR_CS
mtTF1_RS MyoD_RS NFI_CS6 NFI_CS7 NF-AT_RS NF-D_RS NF-GMa_CS NF-GMb_CS
NFkB_CS5 NF-uE3_RS NF-S_CS NF-W1/W2_RS NGFI-B_RS NRF-1_CS NTF_RS Oct-R_CS
Pax-1_RS myc-PRF_RS PR_CS PRDI-BF1_RS PTF_RS Pu.1_RS RAR_RS RFX_RS
RVF_RS SEF-1_RS SIF_core_RS Sp1_CS4 TIN-1-PGK-1 TR_RS TTF-1_CS USF_CS
VBP_RS XF1/XF2_RS XPF-1_RS YB-1_LY-box E2F/DRTF-1_class_I E2F/DRTF-1_class_II
E2F/DRTF-1_class_III SCB MBF-TMP1-beta MBF-TMP1-alpha NF-I-adenovirus
IEF1-IEB1 HTF4-HIV-E-box-I MGF_CS MGF-beta-casein glucagon-G3 glucagon-G3B
Ad_DE1 Ad_DE2 TGA1a-as-1 TGA1b-hex1 CF2-I_RS CF2-II-s15 Ets-1-T-alpha-2_(1)
eve-stripe2-bcd-1 PER3 PER2 PER1 PRE-TAT NF-AT-IL-2.2 KTF-1_CS
keratinocyte_CS PTF-1-amylase.1 PTF-1-amylase.2 GArC1 GArC3 COUP-POMC
lambda-P(r)_start_site SIF-wt_RS CyIIIa-P1.1 CyIIIa-P1.2 CyIIIa-P2I CyIIIa-P2II
CyIIIa-P3A.1 CyIIIa-P3A.2 CyIIIa-P3A.3 CyIIIa-P3B CyIIIa-P4 CyIIIa-P5 CyIIIa-P7I
CyIIIa-P7II HNF-3-TTR_(1) P1_CS P2I_CS P2II_CS P2II_CS2 P3A_CS
P3B_CS P4_CS P5_CS P7I_CS P7II_CS p53-RGC-1 p53-772-C(BE) p53_CS
p53_RS ABF-1_CS AP-1_CS ATF_CS beta-actin-intron-SRE C/EBP_CS CAC-BP_CS
CATT-BP_RS1 CATT-BP_RS2 CREB_CS2 EBP-1_RS EF-C_CS2 FIS_CS GAL4_CS GT-2A_RS
GT-2B_RS H4TF-2_RS HAP-1_RS1 HAP-1_RS2 HNP-1_CS IBP-1_CS IBP-1_CS2 KBF-1_CS
LOB_RS MAT-alpha1_RS MRE-BP_CS NF-1_CS GATA-1_CS2 NF-kB_CS NF-mu-E1_CS
OBP_RS OTF-1_RS OTF-2A_RS PEA-2_RS RAF_RS SRF_CS2 TopoI_RS TopoII_RS
TUF_CS2 XRE-BP_RS AluA GAGA-E74A.1 GAGA-E74A.2 GAGA-E74A.3 GAGA-E74A.4
p53-human-gadd45 p53-hamster-gadd45 alpha(1)-I3-GME TAT-GME c-Myb-HIV
HIV-2-PuB1 HIV-2-PuB2 Ets-1-T-alpha-2_(2) Initiator_CS PO-B_binding_site
enhancer_core_(2) Sph-Box ATF_CS4 PEA3_site_CS RPG-alpha_site mu-E3_(2)
c-Myc_binding_site myc-TCE_(1) TIE_(2) c-Myc_P2_promoter_site GSG_element_(2)
MHC_class_I_enhancer_site ISRE/VRE/PRDI_CS2 URE_(1) ETS2_S/S2_site ETS2_H2_site
U2/U6_proximal_element Polyoma_fPyF9 N-ras_NRE FIRE RARE_CS CRBPE/RXRE
TSE/TRE VDRE_CS_(1) IRE-A_(1) HNF-1_site ATBF1-AFP C/EBP-HBV_Box-beta
C/EBP-Gene_248(2) Albumin_D_Site HBVI-FPV GABP_site HNF-3_site LFA1_site
ANF_site MTF1-MRE IL-1_response_element alpha(1)-gene_element-I kappa-E2_CS1
NFAT_site class_II_gene_X_CS IA-beta-X IA-alpha-X IE-alpha-X IE-beta-X
IA-beta-X' GM-CSF_promoter_site pyr_factor_site IEF1-IEB MGF_site KRE2
KRF1_site PVF_site Topo_II_cleavage_site_CS MDBP_site ISRE_(1) ISRE_(2)
ISRE_(3) PPE as-1 ARIIp ARIIb CARG_box Adh-p1_(1) pF
pD C/EBP-LTR.1 C/EBP-LTR.2 C/EBP-LTR.3 Adf-1-P1-C Adf-1-P1-B Adf-1-P1-A-1
FSE2.2 NF-1-e RI ZIA/ZIB ZIC ZID/ZII HCG-URE CIIS1
UAS2_(1) UAS2_(2) UAS2_(3) DRE CYP1A1-BTE GBF-B3-DG17 GBF-B4 DHFR-5'-UTR.1
Sp1-human-beta-polymerase CREB-beta-polymerase beta-polymerase-site_C1
beta-polymerase-site_E_(1) EBV-ZRE6 EBV-ZRE5 EBV-ZRE4/TGTG2 EBV-ZRE3/TGTG1
EBV-ZRE1 CArG-1 En-k1 En-k2 Eve-k3 UAS1_(1) ERE-vit-A2 Eve-site_e5_(1)
beta28 IR_(2) CRE_(1) C/EBP-LTR(1) alpha-globin-CCAAT_site TO-CACCC-box
CACCC_site_2 betaE-F4 EKLF-gamma-globin GSTYa-XRE GPHalpha-GRE1 GPHalpha-CRE
GPHalpha-GRE2 GPHalpha-GRE3 GPE1 dGHF-1 pGHF-1 dGHF1_(2) pGHF1_(2)
IL-6RE_(1) HBV-NF-1c HBV-EP NF-1b AP-1-site_E NF-1a Sp1-LTR.1 HSE_(1)
HSP70A-HSE hsp70-CAAT CP1-SRE HSE2_(1) 21bpI 21bpII 21bpIII EF-C_site_(1)
ATF_site ISRE_(4) OCTA_(1) ACCC-containing_site hORE-X NF-kappaE1_site
RIPE3a1 bINF-PRDI_(2) ISG15-ISRE_(3) ISRE_(6) ISG54-ISRE_(2) UAS-L
UAS-L2 MREd_(2) MREd_(3) MREc_(2) BLE-1 IRS_(1) ICS_(2) v-Myb-site_C
v-Myb-site_B v-Myb-site_A GRE_(1) UBR ML1 C/EBP-LTR(2) c-Ets-1-LTR
MBTE OTC-site_B_(2) OTC-site_C_(1) OTC-site_D_(2) c-fos-ERE_(2) UAS_(1)
CRE_(3) PEBP2_site NF-1-junction PBGD-CACCC-site ENKCRE-1_(2) ENKCRE-2
c-Fos-nGRE C/EBP-LTR(3) IES1 IES2 somatostatin-CRE.1 unknown-CRE.2
AP-1-P.1 AP-1-P.2 TCR-NF-alpha1 deltaE1_(2) deltaE4_(2) deltaE6_(2) transferrin-site_III
transferrin-site_IV CTF-CR TRE-pal TH-FSE DSE_(1) PSE_(1) c-Fos-CRE
CAP-CRE HIV-TMF-site AF-1-k-apoB C/EBP-k SDRE_(2) DP3 Oct-1_site_(1)
Oct-2_site_(1) Oct-2_site_(2) Oct-1_site_(2) lysozyme-site_e_(1) lysozyme-site_f_(1)
lysozyme-site_g_(1) NCAM-HBS-I NCAM-HBS-II NF-1-MMTV PEPCK-CRE-1 C/EBP-B
PEPCK-site_C_(2) C/EBP-D(1) C/EBP-E(1) Sp1-site_C USF-B GATA-1-site_A
TD5 TD4 kappaB-pd RBE UASd OV-330 OV-280 OV-250
OV-220 OV-150 gamma-globin-distal-CCAAT theta-globin-GC-I CCAAT_site_2
betaP-F1 betaE-F5 ADH-site_d8_(1) ADH-site_d8_(2) ADH-site_d7_(1) ADH-site_d7_(2)
ADH-site_d6_(1) ADH-site_d6_(2) ADH-site_d5(o) ADH-site_d5(m) ADH-site_d4_(1)
ADH-site_d4_(2) ADH-site_d3_(1) ADH-site_d3_(2) ADH-site_d2_(1) ADH-site_d2_(2)
ADH-d1 ADH-site_d0_(1) ADH-site_d0_(2) ADH-p8_(1) ADH-p8_(2) ADH-p7_(1)
ADH-p7_(2) ADH-p6(m) ADH-p6(o) ADH-p4(o) ADH-p5(m) ADH-p3_(1) ADH-p3_(2)
ADH-p2b ADH-p2 ADH-p2a ADH-p2alpha_(1) ADH-p2alpha_(2) ADH-p0_(1) ADH-p1_(2)
ADH-p0_(2) E1A-BS20/21 E1A-BS19 E1A-BS15 E1A-BS13 E1A-BS9 E1A-BS10 E1A-BS7
E1A-BS6 E1A-BS5 E1A-BS4 E1A-BS3 E1A-BS2 E1A-BS1a E1A-BS1b MREa
PE-2 GRE_(2) C/EBP_site_II C/EBP_site_Ib GHF2 rGH-GHF7 his3-GG1-Q-element
M-CAT Ad2-ML-Inr1_(1) Inr1_(2) TG23 CM-1 BCD1 BCD6 enII
NRE-A GST-Ya-EpRE Ftz_binding_site betaE1_(1) betaE2_(1) betaE3_(1)
betaE4 betaE6 betaE7 GA1_(1) GA1_(2) FUSE CRE-BP1-CCAAT2 CCAAT1
SAA3-PR-II TPO-enhancer_site_3 TPO-TTF-1_site TPO-enhancer_site_1 TPO-enhancer_site_2
Kr4-eve-2-D2 hb3_(1) kr3 BS2-18 BS1-26 BSX-18 TT2 T0
TT0 TT4 H0 HH2 HH4 HH6 HT5 HT6
CON fRE2 fRE3 fDE2 COL1A1-B2 AP-1-NRE kr1 hb3_(2)
hb2 hb1 hb8 hb7 hb6 hb5 hb4 K1
K2 Df6 Cf1 Bf2 Uf3 Uf7 Uf8 Uf9
Uf10 SC SB SA HB-1 alpha-1-PI-site-j TGT3-apoB
LyF-1-muB GC-II insulin-NRE IUF1-CT-II CT-I alpha-MHC_TRE2 CRE_(4)
SDI-A2 MB7 MB4 MB1 prolactin-D10 prolactin-D9 prolactin-D8
prolactin-D7 prolactin-D6 prolactin-D5 prolactin-D3 prolactin-D2 prolactin-D1
GR1/GR2 eve-e5 eve-site_e4 RRE-DR P12.B P12.A CPE OXBOX
GFAP-GFIII GFAP-GFII GFAP-GFI IF2-FP2 E6_element_(2) AABS GBP-ISRE
TnI-IRE DSE_(2) PSE_(2) HPV-fp2u albumin-site-eG albumin-site-eH Su'x'
Su1 Su2 Su3 Su'y' Su'z' n-ras-NRE OL-1 PL-1
PL-2 OL-2 beta-globin-CCAAT_site_3 CSS_(1) CSS_(2) HNF4D CCRU
GAS_(2) C/EBP-intron_site X2_(1) X2_(2) RIPE3a2 C/EBP-A(1) C/EBP-A(2)
C/EBP-E(2) C/EBP-D(2) hemopexin-IL-6RE IVa2-Inr TNF-RE opsin-RET1 unknown-site_II
transferrin-TATA ApoB-GRE PGK1-GC-box PGK1-CCAAT-box erythropoietin-site_B
erythropoietin-site_D hEpo-HRE TR2RE-EPO ADH2-C/EBP-A ADH-site_F_(1) ADH-site_F_(2)
ADH3-C/EBP-E ADH-site_G_(1) ADH-site_D_(4) ADH-site_C_(3) ADH-site_B_(5)
ADH-site_A_(4) ADH-site_A_(5) ADH-site_A_(6) ADH-site_F_(3) ADH-site_E_(2)
ADH-site_D_(5) ADH-site_C_(4) ADH-site_B_(6) ADH-C/EBP-A(4) ADH1-C/EBP-A
C/EBP-ADH1-A HB3 HB4 HB5 HB6 HB7/HB8/HB9/HB10 ERE_(3)
ISRE_(9) CArG ISRE_(10) IR-site_D IR-site_C IR-Site_B IR-site_A_(2)
IR-site_E IR-site_D_(2) IR-site_C_(2) IR-site_B IR-site_A GRFE HNF-1-F
GPIIb-site_E GPIIb-site_D HNF-1-C GPIIb-site_B C/EBP-A(7) Sp1-B NF-1-B
C/EBP-A(8) DE-2 POMC-PE-1 HSTF-UASx1 MGF-FP1 unknown-FP2 unknown-FP4
unknown-FP3 ZIIIA ZIIIB Htf9-site_E_(5) Htf9-site_G_(2) CAAT_site(1)
Zif_(1) Zif_(2) TATA_(3) Zif_(3) COUP-NRE_1 COUP-NRE_2 oris HBV-EF-C_site_(2)
baculovirus-hr5 AGP-HA decamer/octamer pd CAAT_site(2) OCTA_(2)
BB1-beta-globin BCT HS-40_(1) HS-40_GATA1(b) HS-40_5prime-NA HS-40_3prime-NAI
zeta-2-globin-GTII HS-40_GATA1(c) HS-40_GATA1(d) HNF3-W MREe TD2
TD3 hsp70-HSE_(3) HSE_(4) CD4-1 CD4-2 CD4-3 NRF-2-A NRF-2-B
RIPE3b LH-ERE Pit-1-P2 prolactin-site_A_(9) Pit-1-P1 UF aminopeptidase-N-DF
delta-globin-PYR beta-globin-GT-I alpha-actin-SRE3 alpha-actin-SRE2 TdT-site_E_(6)
mTDT-site_D_(8) mTDT-site_D'_(1) mTDT-site_C_(7) mTDT-site_B_(10) mTDT-site_A_(10)
mTDT-site_F_(4) lambda5-site_E_(7) Ik-2-lambda-5 EBF-1/Ik-1-lambda5-site
lambda5-site_C_(8) lambda5-site_B_(11) lambda5-site_A_(11) lambda5-site_F_(5)
IgH-V1-BF-site VDRE_CS_(2) GRE_(4) TRE_(2) GR-intron-site-1 collagenase-TRE
dNRE_(1) MMTV-dNRE_(2) GRES4 GREM2 GREM3 GREM4 GREM5 GREM6
IL-6-MREI GR-IL-6-Inr IL-6-Inr_(1) PRE ERE_(5) mERM ERE_(6)
TRE_(4) ERE1 ERE2 ERE3 ERE4 ERE5 Elk-1-SRE MEF-2-HF1
MEF-2-A/T Elk-1-E Elk-1-F Elk-1-G Elk-1-Q Elk-1-H Elk-1-M Elk-1-T
Elk-1-P Elk-1-D Elk-1-A Elk-1-J Elk-1-L Elk-1-K UBE OMP-Inr
hsp70B-HSE HSE_(6) TRF-TRA TRF-site-C TGF-beta-3-DS2 SEF3-alpha4 C/EBP-apoB-intron-enhancer
apoB-intron_1-enhancer_II apoB-intron_1-enhancer_III apoB-intron_1-enhancer_IV
AP-2-apoB-intron_1-enhancer_V apoB-intron_2-enhancer_A apoB-intron_2-enhancer_B
NF-1-intron_2-enhancer_C apoB-intron_2_enhancer_D apoB-intron_2-enhancer_E
apoB-intron_2_enhancer_F collagenase-TRE_(2) MB6 MB3 MB1a
rpe_UAS PU_box PYK-UAS GT_motif ABRE/Em1a ApoB-reducer_(1) ApoB-reducer_(2)
ApoB-reducer_(3) ApoB-reducer_(4) ApoB-reducer_(5) ApoB-site_a ApoB-site_b
ApoB-site_c ApoB-site_d ApoB-site_e ApoB-site_f ApoB-site_g ApoB-site_h
ApoB-site_i transferrin-Ia/I1 HLA-DRB1-Xbox HLA-DQB1-Xbox IL2-US1 IL2-TCEp
E2-TATA/E2T E2-N5-T E2MT E2TM SAS1_alpha SAS1_beta PE1 PE3
RE1 AS-C-intron_I enhancer/Tbeta2 PU2/MCB PU3/MCB C21/MCB C2/MCB
C6/MCB SAA1-site_IV_(1) C/EBP-SAA-1 SAA-site_II_(2) C/EBP-SAA-2 CRE_(5)
DHS_E_(1) DHS_E_(2) PTH-CRE UAS-rpg URS CDEI_(2) CDEI_(3) CDEI_CS
UAST52/ORE DDR2-site_A_(13) DDR2-STRE SSP1-HSE SCB_consensus 35SRNA2 URS1_(1)
SPO13-URS1 ARS_(1) ICL1-CSRE FBP1-CSRE CEN_homology hsg GBS1/DASI_(1)
DRSII_(1) GBS2/DASI_(2) DRSII_(2) TBP-ARS-B2 TBP-ARS_(2) TBP-ARS_(3) TBP-HMRE_ARS_(1)
TBP-HMRE_ARS_(2) TBP-ARS_domain_A TBP-ARS_domain_B UAS1CHA UAS2CHA TATA
MCM-P-site P+Q HSE_(8) HSE_(9) ARS-site_III ARS-site_I_(1) ERG11-UAS1
ERG11-URS1 ERG11-URS1-2 ERG11-URS2 ERG11-UAS2 PHO4-PHO8 HSE-p J18
J65 G41 G30 K14 CDE1-D1 yATF-A DRS1/ABF1-G DRS1/ABF1-H
Hoxa-7_RS UAS1_(3) UAS1_(4) UAS1_(5) UAS1_(6) UAS2_(5) UAS2_(6) CDE
CDE1 HO-XBS HSE-SSA4 RRE UIS_3' UIS_5'_(1) UIS_5'_(2) PoR
ERE_(7) lactoglobulin-D2 A1-1 A2-1 A1-2 A3S S2
StM TRH core_promoter/TATA NFB_site ANF-GRE ANF-site_V ANF-site_IV
ANF-site_III ANF-site_II ANF-site_I collagen-A-34 betaE1_(2) betae2 C-rich_element
betae3 betae4 betae5 betae6 SKO1-JN04-CRE CRE_(8) TRE_(6) TGF-beta-RE
Talpha1/CRE Talpha2 AP-1_site CARE1/CARE2 CARE3/CARE4 laminin-RARE RARE/gamma2_RARE
beta-RARE1 rCRBPII-RXRE rCRBPI-RARE DR-5-RARE CRABP-II-RARE2 RARE1 DR-1/RXRE
DR-2 T3RE/OP T3RE-half-site mCP-H-RARE MYH6-T3RE OL-4/RARE OL-1/RARE
OL-3/RARE OL-8/T3RE OL-9/T3RE OL-10/T3RE OL-11/T3RE/RARE OL-13/T3RE INV-PAL(+3)/T3RE
PAL/T3RE/RARE DR/nT3RE Pit-1-hCS-B hCS-1-T3RE GLYCA-nTRE somatotropin-nT3RE
mCRBPI-RARE gamma-F-crystallin-RARE DR+2_(1) DR+2_(2) DR+2_(3) DR+2_(4)
DR+5_(1) DR+5_(2) DR+5_(3) DR+5_(4) DR+5_(5) DR+5_(6) DR+5_(7) DR+5_(8)
PAL+0 PAL+1 DR+1 DR+4 DR+5 INV-PAL+4 INV-PAL+5 TRE-LAP
ACOA-PPRE PPRE EcRE_(2) HBV-FPV TAF RRE-M E-pal TFIIIA-UAS
mADA-site_A mADA-Sp1-site_B mADA-Sp1-site_C apoB-reducer-E apoB-reducer-F
apoB-reducer-G apoB-reducer-site_a apoB-reducer-site_b apoB-reducer-site_c
apoB-reducer-site_d PEPCK-T3RE AFP-Ib/Ia AchR-distal_E-box AchR-proximal_E-box
GCRE1 GCRE2 GCRE3 GC_box_(3) 35SRNA1-Site-1 CRE_(9) TAT-BIII
DCRE CRE_(11) CRE_(12) CRE_(13) PPT-A-CRE HBV-CRE-like_element c-fos-DSE-E_box
c-Ets-stromelysin NRF-2-A/B site_C_(10) site_D_(10) GCR1-UASTPI-1 RAP1-TPIUAS
alpha2-RARE myc-TCE IL5-CLE0 CLE0_(2) globin-HS2-GTGGG-site c-Myb-site_IV
c-Myb-site_IV_(2) ME1/TR_box MP1/TR_box HCR_(1) HCR_(2) HCR_(3) HCR_(4)
HCR_(5) HCR_(6) sim-Sna-1 sim-Sna-2 sim-Sna-3 sim-Sna-4a/Sna-4b sim-Sna-5b
sim-Sna-5d Sox-5-BS12 enhancer/BS-1 enhancer_(1) enhancer_(2) enhancer/BS-2
IRS-CS gfa-region_A-fp gfa-region_B-fp gpa-region_D-fp PRP_box_1 UAS_II
UAS_IV UAS_V HS4_18C GCR1-UASTPI-2 delta_repressing_elements delta-activating-CS
SBE mu-E5_(2) h/E-1 GC-box_(4) myoD1-MCAT-CAAT CCAC_box kappaE3-CRE-core
kappa-E3prime-enhancer/DS kappa-E3prime-enhancer/PU_box Lmo2-E-box-1 PR264-MRE_J
PR264-MRE_K PR264-MRE_C PR264-MRE_I PR264-MRE_H PR264-MRE_B PR264-MRE_G
PR264-MRE_F PR264-MRE_A PR264-MRE_E PR264-MRE_D EFIII IPE MMTV-F3
MMTV-F12 MMTV-F4 MMTV-F1b IK-BS1 IK-BS2 IK-BS3 IK-BS4 IK-BS6
IK-BS7 IK-BS8 deltaA TCR-Vbeta-dodecamer MEF2D-c-jun histone-H2B-CCAAT
H2B-variant-octa C13 STAT1-IRF-1 DR-4 UPE1 UPE2 UPE3
region_I_enhancer ICS_(3) MHC-class-I-site_alpha LP-alpha LP-beta Oct-1-lyn-T
TRP1-site_A TRP1-site_E SIF3 SIF2 SIF1 Tax/CREB-JC-core Tax/CREB-C6
CREB-G10 V-beta-8.1-CACCC HEN1-site1 Adf-1-CS DBP-CS enhancer_E_box TB1
TFE3-S-Adh-2 HNF-1-ApoB-E c/ebp-ApoB-E ABF-2-MLC2-P MLC-2-site-S ABF-1-MLC-2-site-A
MLC-2-site-B MLC2-site-C Zta-BMRF1 IGLL-Elambda2-4-A IGLL-Elambda2-4-B
IGLL_Elambda2-4-C IGLL-Elambda3-1-A IGLL-Elambda3-1-B IGLL-Elambda3-1-C
catalase-silencer-element vimentin-antisilencer_element DBP-CYP26 RVL-3-1R
neu-GTG TEF-prolactin-BTE PTF-7SK-RNA-PSE ADA-NF1-ADA TCF-1alpha-ADA ADA-HSIII-FP3
FTZ-F1-ADH DEP3-ADH Sp1-ATP1A1 ATP1A1-ARE mMDH-FP1 BSAP-CD19-site_1 BSAP-CD19-site_2
HSF1-hsp70A-HSE-distal GATA-1-beta-globin-HS-3_(1) GATA-1-beta-globin-HS-3_(2)
GATA-1-beta-globin-HS-3_(3) SRY-CD3-epsilon IL2-EBS2 rice-actin-site-1
rice-actin-MPE c-myc-PUR peripherin-PER3 peripherin-PER2-site-1 peripherin-PER1
snail-PLA-site-1 snail-PLA-site-2 snail-PLA-site-3 snail-PLA-site-4 snail-VA-site-5
snail-VA-site-6 snail-VA-site-7 snail-VA-site-8 snail-VA-site-9 snail-VA-site-10
snail-AE-site-11 snail-AE-site-12 TTF-1-TPO-A TTF-1-TPO-B' TTF-1-TPO-B
TTF-2-TPO-Z TTF-1-TPO-C HNF-3-HNF-3-1 HNF-3-HNF-3-2 LF-H3beta-HNF-3 UF2-H3beta-HNF-3
N-Oct-3-CS Brachyury-CS Agamous-CS AP-1-hANF core-bf-SIV core-bf-Igh core-bf-Igh-2
core-bf-TCRG core-bf-TCRG-2 CAC-bf-HS-40 CEBPB-TGA2 NF-4FA-4F2HC NF-4FC-4F2HC
NF-4FB-4F2HC A4_amyloid_protein-undefined-s MyoD-acetylcholine_receptor
REB1-ACT1 CBF-alpha-actin alpha-actin-undefined-site MRE/SRE1 MAPF1-alpha-actin
SRF-alpha-actin_(1) SRF-beta-actin Elk-1-beta-actin ETF-beta-actin_(1)
ETF-beta-actin_(2) ETF-beta-actin_(3) ETF-beta-actin_(4) CArG-actin Adf-1-Adh-distal-1
Adf-1-Adh-distal-2 HNF-1-albumin_(2) HNF-1-albumin_(3) C/EBP-albumin_(1)
C/EBP-albumin_(2) NLS1-albumin NF-1-albumin HNF-3-albumin CBF-albumin HNF-1-pB
C/EBP-albumin_(3) DE-I HP1_site PTF1-alpha-amylase Tf-LF1-antithrombin_III
HNF-4-alpha1-antitrypsin HNF-1-alpha1-antitrypsin_(1) HNF-1-alpha1-antitrypsin_(2)
Antp-Antp RARE/site_A distal_region_I/_M C/EBP-apoAII distal_region_I/_K
AIIJ-element distal_region_I/_I apoE-B2-V apoE-ERE apoE-PET apoE-B1-II
apoE-B2-II Sp1-apoE apoE-FP-DI-B2 apoE-FP-DII E2 E1 LF-A1-apoVLDL-II
ANF-undefined-site hE-IRS ME12-element_B ISRE/IRE/B_region RAP1-BCY BK_virus-FP-IV
NF-1-BK_virus BK_virus-FP-II E2-BPV-1-1 E2-BPV-1-2 RII Zta-BSLF2+BMLF1/BC-R2
TAF-CIII-sub_II TAF-CIII-sub_VI PTF1-carboxypeptidase_A REB1-CDC9 AGP/EBP-artificial_sequence
CHS-box-II MRE-CHS Chox-1-site_1.4-1 Chox-1-site_1.4-2 Chox-1-site_a-1
Chox-1-site_a-1' Chox-1-site_a-1'' Chox-1-site_a-2 Chox-1-site_a-3 Chox-1-site_a-4
COL1A1-undefined-site-1 procollagen-Region-A NF-1-alpha2 EFI-alpha2 CP1-GBRE
HNF-1-CRP HNF-1-CRP-2 C/EBP-CRP MEF-2-mck E1_site E3_site alphaA-crystallin-DE1
alphaA-crystallin-d-site alphaA-crystallin-undefined-s3 HAP1-CTT1 TAF-CYC1
XRE2 cyt-P-450c-DXE5 DHFR-undefined-site-1 DHFR-undefined-site-2 Adf-1-Ddc
ddc-be-2 Oct-3-RS NF-1-E1a NF-1-E1a_(2) E1a-undefined-site element_C EIIE-E1A-responsive-element
DRTF1-E2-early_promoter_(1) EIIaE1-T1-element element_T1 CTF-E3 TFIID-E3
CAP-E4 RAP1-E8 RAP1-RPG_box Sp1-EGF_receptor_(1) EGFR-undefined-site-1
EGFR-A-box Sp1-EGF_receptor_(2) Sp1-EGF_receptor_(3) ETF-EGF_receptor_(1)
Sp1-EGF_receptor_(4) ETF-EGF_receptor_(2) EGFR-EIII-site-1 EGFR-EIII-site-2
RPF1-EGF_receptor EGFR-undefined-site-5 EGFR-downstream-enhancer-s1/3 EGFR-downstream-enhancer-s6/7
EGFR-downstream-enhancer-s8 elastase_I-EIeB-IX elastase_I-EIeB-VIII elastase_I-B-element
elastase_I-undefined-site-4 elastase_I_A-element ElaI-PCE-box-B XPF-1-elastase_I
elastase_I-FP-II elastase_I-FP-I elastase_II-site_I ENKTF-1-factor-IX C/EBP-factor_IX
ICSBP-complement_factor_B HNF-1-alpha-fetoprotein_(1) HNF-1-alpha-fetoprotein_(2)
NF-1-FIB2 YMRF_site Sp1-gamma-fibrinogen SGF-2-fibroin_(1) SGF-2-fibroin_(2)
SGF-2-fibroin_(3) CREB-fibronectin NF-1-fibronectin DSE c-fos-RbRE
GAL4-artificial_sequence_(1) GAL4-GAL7_(1) GAL4-GAL7_(2) CTF-alpha-globin
EFgammaa-alphaA-globin alpha-CP2a/-alphaA-globin GATA-1-3'-site GATA-1-alphaA-globin_(1)
GATA-1-alphaA-globin_(2) GATA-1-beta-globin_(1) GATA-1-beta-globin_(2)
GATA-1-beta-globin_(3) betaH-globin-undefined-site GATA-1-betaH-globin_(1)
TGGCA-binding-betaH-globin GATA-1-betaH-globin_(2) GATA-1-betaH-globin_(3)
GATA-1-betaM-globin_(1) GATA-1-betaM-globin_(2) betaM-globin-undefined-site
betaM-globin-IVS2-B2 Spi-1-betaM-globin_(1) Spi-1-betaM-globin_(2) gamma-globin-undefined-site-1
GATA-1-gamma-globin_(1) GATA-1-gamma-globin_(2) GATA-1-gamma-globin_(3)
EFgammaa-gamma-globin Sp1-zeta-globin_(1) GATA-1-zeta-globin ZF1-zeta-globin
ZF2-zeta-globin Sp1-zeta-globin_(2) alpha2uNF3-alpha-2u_globulin alpha2uNF2-alpha-2u_globulin
alpha2uNF1-alpha-2u_globulin Sp1-alpha-2u_globulin CBF-alpha-2u_globulin
AP-1-alpha-2u_globulin glucagon-IRE glucagon-G2-element glucagon-G1-element
TSH-alpha-URE NF-1-glycoprotein_hormone_alph GPIIb-proximal-EBS CK-1/_CK-2
NF-kappaB-GM-CSF_(1) NF-kappaB-GM-CSF_(2) Sp1-growth_hormone GHF3_binding_site
GH-T3RE GH-PRE T3R-growth_hormone su(Hw)-gypsy su(f)-gypsy haptoglobin-IL-6-RE
C/EBP-haptoglobin HBV-enhancer_II BAS1-HIS4 PHO2-HIS4_(1) PHO2-HIS4_(2)
HiNF-B-histone_H1 histone_H1-beta-undefined-site histone_H3-undefined-site
HiNF-D3-histone_H3 histone_H3.2_site_X ASF-1-histone_H3 histone_H4-site_II
AP-1-HIV-1 NRE/_site_1 c-Rel-HIV-1 EBP-1-HIV-1 FP2 HMRE_ARS_(3) RAP1-HMR
CCBF-HO F_region E-region NF-1-Hox-1.5 NF-1-HPV-8_(1) NF-1-HPV-8_(2) NF-1-HPV-8_(3)
NF-1-HPV-8_(4) NF-1-HPV-11_(1) NF-1-HPV-11_(2) NF-1-HPV-11_(3) NF-1-HPV-11_(4)
NF-1-HPV-16_(1) NF-1-HPV-16_(2) NF-1-HPV-16_(3) NF-1-HPV-16_(4) NF-1-HPV-16_(5)
NF-1-HPV-16_(6) NF-1-HPV-16_(7) NF-1-HPV-18_(1) NF-1-HPV-18_(2) NF-1-HPV-18_(3)
EcR-hsp27 HSTF-hsp70 HSF-hsp70_(1) HSF-hsp70_(2) HSF-hsp83 NF-1-CMV-IE1
HCMV-IE-1-undefined-site CMV-enhancer/_19_bp_repeat_(1) CMV-enhancer/_19_bp_repeat_(2)
enhancer/_18_bp_repeat_(1) AP-1-IE-1 NF-kappaB-IE-1 Oct-1-IE-1 alphaH2-alphaH3-IE-2
Oct-1-IE-3 Oct-1-IE-3_(2) Oct-1-IE-3_(3) Oct-1-IE-4/5 IFI-56K-ISRE C/EBP-V1/VH-III
muEBP-E-IgHC-site Oct-1-IgH-1 IgM-enhancer_site_E 96K-protein-IgH IgHC-Eu-octamer
kappa-A_site muEBP-E-Igklc-site Isl-1-insulin Far_box insulin-A3/4 InsCRE
Nir_box_(2) ARP-1-insulin AdMLP-UPS IRF-1-IFN-alpha1 IFN-beta-PRD-III EBS1
NF-IL-2A-IL-2 IL-2kappaB CD28RE NF-kappaB-IL-2Ralpha IL-2Ralpha-kB-3X
ISG15-ISRE_(4) NF-1-JCV-A/B NF-1-JCV-site-C AP-1-JE Sp1-c-jun_(1) AP-2-c-jun_(1)
AP-2-c-jun_(2) AP-1-c-jun krox20-SRE-1 NAT2-BS1 NAT2-BS2 RAP1-LSR1 Ad-MLP-undefined-site
USF43-Ad-MLP CBF-MLP R1-MLP R2-MLP MLP-DE2 DEF-MLP DTF-MLP MLP-mitigator
UAS/_d MTII-distal_BLE MTII-proximal_BLE_(1) MTII-proximal_BLE_(2) CUP2-CUP1_(1)
CUP2-CUP1_(2) CUP2-CUP1_(3) P_box_(1) P+Q_boxes_(1) P+Q_boxes_(2) MATalpha1-MFalpha2
AP-1-MHC_class_I_H-2Dd H-2K-ICS_(4) HC-Kb-site_alpha_(2) PU-MHC_class_II_I-Abeta
NF-MHCIIA-MHC_class_II_Dbeta NF-MHCIIB-MHC_class_II_Dbeta NF-W2-MHC_class_II_Ealphad
MHC_class_II_Ekalpha-undefined I-Ealpha-Y'-box E-alpha-Pu-site W_box
X_box_(2) Y_box_(3) HLA-A3-ISRE MHC_class_II_HLA-DRA-undefined ICSBP-beta2-microglobulin
PR-MMTV GR-MMTV_(2) C/EBP-MSV MIF-c-myc myc-CF1-c-myc_(1) Sp1-MBP myosin_light_chain_2-A_-undef1
myosin_light_chain_2-A_-undef2 alphaMHCBF1-alpha-MHC EBNA-1-EBV_oriP EBNA1-enhancer-I
EBNA1-enhancer-II EBNA1-enhancer-III EBNA1-enhancer-IV RAR-alpha1-osteocalcin
osteocalcin-VDRE SIS-distal-element ROM2_CS PAL-ELREF PAL-undefined-site-2
PHO4-PHO5_(1) PHO2-PHO5 PHO4-PHO5_(2) RAP1-PHO5 TAF-PHO5 A_enhancer/_alpha
SAP-1b-PEA3* GATA-1-PBGD_(1) NF-E2-PBGD GATA-1-PBGD_(2) GATA-1-PBGD_(3)
CAC-binding-PBGD_(2) AP-4-proenkephalin AP-2-proenkephalin Pit-1-prl prolactin-ERE
PCNA-region-III PCNA-region-II PCNA-region-I proliferin-Sph-element GBF-CP2
RAP1-PYK1 REB1-RAP1 CTF-1-ras1 G_box GT-1-rbcS-3A GBF-rbcS-3A CF1-RAR-beta
GABP-rpl32 delta-rpL32 TAF-rpS33 P1-S14 NF-1-SL3-3 P_box_(2) Q+P_box
MATalpha2-STE6 T-Ag-origin_of_replication LSF-SV40_(2) TC-I/TC-II NF-kappaB-SV40
AP-4-SV40_(1) LSF-SV40_(3) NFalpha2-T_cell_receptor_alpha NFalpha3-T_cell_receptor_alpha
NFalpha4-T_cell_receptor_alpha TG-III Tg-K-region TNF-alpha-CK-1 NF-kappaB-TNF-alpha
TNF-alpha-Y_box transferrin-Ia/Ib transferrin-DR-II PR_I transin-TIE
AP-1-TTR REB1-TRP5 REB1-TRP1 PTF1-trypsina-1 PTF1-trypsina-2 MCM1-Ty1-site_2
MCM1-Ty1-site_1 TyBF-Ty917 STE12-Ty917 GR-TAT TAT-undefined-site-1 TAT-undefined-site-2
TAT-undefined-site-3 U2_snRNA-octamer SPH_motif CRE/octamer U7_snRNA-undefined-site-1
U7/5-initiation_site GAGA-Ubx_(2) Zeste-Ubx_(1) GAGA-Ubx_(3) Zeste-Ubx_(2)
Elf-1-Ubx Zeste-Ubx_(3) GAGA-Ubx_(4) Zeste-Ubx_(4) GAGA-Ubx_(5) Zeste-Ubx_(5)
En-Ubx Ubx-undefined-site GBF-UDPGPP uPA-undefined-site-1 uPA-US-domain-A
uPA-US-domain-B uPA-US-domain-C uPA-region-C-CRE uPA-undefined-site-4 uPA-FP-VII
uPA-GC-II AP-2-vasopressin AP-1-vimentin Visna-undefined-site AP-1-Visna
NF-1-vitellogenin_II NHP-2-vitellogenin_II PR-vitellogenin_II GR-vitellogenin_II
ER-vitellogenin_II_(1) cVitII-FP7 ER-vitellogenin_II_(2) C/EBP-vitellogenin_II
TF-Vbeta-vitellogenin_II USF-vitellogenin_II NHP4-vitellogenin_II C/NRE
vitellogenin-B1-B/BPE vitellogenin-B1-BPE/B-ABS vitellogenin-B2-left-hand_ERE
vitellogenin-B2-2-ERE WAP-undefined-site REB1-X40 REB1-Y30 pMS1-HMG-FP
c-Myc-distal-kB HBP-1-nos Egr-1-Egr-1_(1) Egr-1-Egr-1_(2) Egr-1-Egr-1_(3)
T3R-alpha-malic_enzyme LBP-1-sTnI_(1) LBP-1-sTnI_(2) LBP-1-sTnI_(3) NF-1-alpha1I3
AFP1-alpha1I3 alpha1I3-element-IV DAP-MLP MAL63-MAL61/62-site-2 MAL63-MAL61/62-site-1
NF-kappaB-IL-6 RadLV-core RadLV-UEA RadLV-UEB RadLV-promoter MuLV-undefined-site
LPV-PU-box LPV-T_element FeLV-core NF-1-FeLV FLV-1-FeLV BSAP-histone_H2B-2.1
TSAP-histone_H2B-2.2 BSAP-histone_H2A-2.1 Pax-6-histone_H2A-2.2 c-fos-FIRE
NeP1-lysozyme lysozyme-silencer-F2-TRE NCAM-C-CG_box Oct-1-IgH-2 vimentin-negative-element
PEPCK-RARE BAF1-rpL2_(1) BAF1-rpL2_(2) IAP-LTR-Enh1 GR-alpha-fetoprotein
alpha-fetoprotein-EE5 C/EBP-GLUT4 Adh1-B2 Adh1-B1 c-Ets-1-GPIIb dl-GPIIb
dl-twi_(1) dl-twi_(2) dl-twi_(3) dl-twi_(4) dl-zen-fragment-1 chymotrypsinB-enhancer-site-2
Low-alpha-PAL-eIF-2alpha GM-PBP-1-GM-CSF c-myb-undefined-site-1 AP-1-c-myb
c-myb-undefined-site-2 CG-1-chs_(1) CG-1-chs_(2) CG-1-rbcS histone_H2A-undefined-site-1
histone_H2A-undefined-site-2 IFN-alpha1-PRDI NF-kappaB1-IRF-1 MHC_class_II_Ia_Aalphak-undefi
CaSRE2 CTF-alpha-actin Sp1-alpha-actin_(1) Sp1-alpha-actin_(2) Sp1-alpha-actin_(3)
Sp1-alpha-actin_(4) SRF-alpha-actin_(2) Sp1-alpha-actin_(5) Sp1-alpha-actin_(6)
Sp1-alpha-actin_(7) KBF1-E1B USF-TS Sp1-TS_(1) Sp1-hsp70_(2) HSF-artificial_sequence
BK_virus-HCR Oct-1-Igk-1 Oct-1-Igk-2 Oct-1-Igk-3 En-en-1 En-en-2 En-en-3
En-en-4 En-en-5 En-en-6 GAL4-CYC1 SV40-DUE SRF-zif268_(1) SRF-zif268_(2)
SRF-zif268_(3) C/Ebp-DBP-aldolase-B CBF-aldolase_B HNF-1-aldolase_B E2F-DHFR
DHFR-GC_box_I NHE E1A-enhancer-site_A_(1) E1A-enhancer-site_A_(2)
HNF-1-HBV-SPI X'_box GR-non-functional_site EFII-RNR2 EFII-ALV_LTR_(1)
ALV_LTR-CCAAT/enhancer-a2/a3 ALV_LTR-a3 f(alpha)-f(epsilon)-rpL30 gamma-factor-prL30
delta-rpL30 Oct-2-IgH GABP-IE3 STE12-PIE/_HinfI PIE/_PRE CUP2-CUP1_(4)
c-Myb-SV40 octopine-synthase-ocs-element E2F-c-Myc-site-I CP1-gamma-globin_(1)
theta1-globin-undefined-site GAGA-E74_(1) GAGA-E74_(2) GAGA-E74_(3) GAGA-E74_(4)
GAGA-E74_(5) GAGA-E74_(6) antp-pos-elem-A1 antp-pos-elem-A2 antp-positive-element-A
antp-negative-element-B antp-positive_element_C Tg-undefined-site-3 TTF-1-Tg
Tg-site_K TgF1-Tg UFA-Tg P_box_(3) NFH3-4-histone_H3 NFH3-3-histone_H3
NFH3-2-histone_H3 NFH3-1-histone_H3 P_box_(4) BP1-beta-globin_(1) BP1-beta-globin_(2)
NHP-1-vitellogenin_II TB3 GC_boxes_IV/III GC_box_II AP-1-IE MBF1-IE
MBF2-IE AFP1-surface_antigen HBP-1-35S_RNA OCSTF-ocs BAF1-YPT1-TUB2_intergenic_regi
BAF1-ARS1 Sp1-DHFR HIP1-DHFR HIP1-SV40 GLI-genomic-CS NF-H2-MHC_class_II_I-Aalpha
RF-X-MHC_class_II_I-Aalpha NF-Y-MHC_class_II_I-Aalpha betaE-F1 BAF1-ARS1-domain_B
Adh-undefined-site PPYR-betaA-globin Sp1-betaA-globin TFIID-betaA-globin
USF-IVa2 ICP4-IE3 v-ErbA-artificial_sequence GCN4-TRP4_(1) GCN4-TRP4_(2)
MIG1-SUC2_(1) MIG1-SUC2_(2) AP-1-NPY Sp1-NPY gastrin-negative-element
S14-site-A AFP-site_V_(2) AFP-site_III_(3) AFP-site_II BGP1-artificial_sequence-1
BGP1-artificial_sequence-2 C/EBP-HBV-secondary_site Ttk-eve_(1) GAGA-eve_(1)
GAGA-eve_(2) Ttk-eve_(2) GAGA-eve_(3) GAGA-eve_(4) GAGA-eve_(5) GAGA-eve-site-1
GAGA-eve_(8) eve-undefined-site troponin-CARG cTNT-M-CAT_1 cTNT-M-CAT_2
AP-4-SV40_(2) EUSF-histone_H5 USF-ADH USF-Spec1 Hox-2.3-undefined-site-1
Hox-2.3-undefined-site-2 Krox-20-Hox-2.3 Hox-2.3-undefined-site-3 Hox-2.3-undefined-site-4
Hox-2.3-undefined-site-5 USF-Hox-2.3 Hox-2.3-D1 PEA3-uPA c-Ets-1-transin/stromelysin
Talpha2_site c-Ets-1-HTLV-I Sp1-MYM1 Sp1-artificial_sequence-1 Sp1-artificial_sequence-2
Sp1-artificial_sequence-3 Sp1-artificial_sequence-4 Sp1-artificial_sequence-5
Sp1-artificial_sequence-6 Sp1-artificial_sequence-7 Sp1-artificial_sequence-8
Sp1-artificial_sequence-9 Sp1-artificial_sequence-10 Sp1-artificial_sequence-11
SWI5-HO BSAP-consensus SRF-consensus GAF-consensus HSF-consensus LF-A1-consensus
LyF-1-consensus MEF-2-consensus CTF-consensus NF-E2-consensus_(1) Oct-3/4_RS
PPAR-consensus PTF1-consensus SIF-consensus p67-consensus TIN-1-consensus
XPF-1-consensus GAGA-Kr Ttk-en Ttk-consensus Tll-Kr_(1) Tll-Kr_(2) Tll-Kr_(3)
BCD2/BCD3 Tll-Kr_(4) BCD4/BCD5 Tll-Kr_(5) Tll-Kr_(6) Kni-Kr Tll-Kr_(7)
USE_(1) USE_(2) CF2-II-s15_(2) CF1-s15 CF2-II-s15_(3) opaque-2-22Z-1
opaque-2-pML1 opaque-2-Z7 opaque-2-22Z-2 MAZ-c-myc-ME1a2 WT1-selected_genomic_sequence1
WT1-selected_genomic_sequence2 WT1-selected_genomic_sequence3 WT1-selected_genomic_sequence4
WT1-selected_genomic_sequence5 WT1-selected_genomic_sequence6 CF2-I-CF2
CF2-I-artificial_sequence CF2-II-artificial_sequence URS1 repressor-MES1
HSE2_(2) repressor-TOP1 repressor-PYK1 repressor-CTA1 repressor-G3PDH repressor-CAR2
repressor-ILV2 repressor-CYB2 repressor-ARG4 repressor-ENO1 repressor-CTT1
repressor-HSF1 ANF-albumin-1 ANF-albumin-2 MuLV-RBS KBF1-MHC_class_I_H-2Kk
MHC_class_I_H-2Kk-undefined-si Ii-kappa-B-1 SF-3-SCC SF-2-SCC SF-1-SCC
CYS3-cys-14_(1) CYS3-cys-14_(2) CYS3-cys-14_(3) CYS3-cys-3 Pu-box PEPCK-AF2
Ftz-ftz_(1) Ftz-ftz_(2) Ftz-ftz_(3) Ftz-ftz_(4) Ftz-ftz_(5) Ftz-ftz_(6)
Ftz-ftz_(7) Ftz-ftz_(8) Ftz-ftz_(9) Ftz-ftz_(10) Ftz-ftz_(11) Ftz-ftz_(12)
Ftz-ftz_(13) Ftz-ftz_(14) Ftz-ftz_(15) Ftz-ftz_(16) Ftz-ftz_(17) Ftz-ftz_(18)
Ftz-ftz_(19) Ftz-ftz_(20) Adh-1-undefined-site_(1) Adh-1-undefined-site_(2)
Adh-1-undefined-site_(3) BAF1-RPC160 BAF1-RPC40 BAF1-consensus_(2) AP-1-CCK
CCK-1b-CCK NF-lambda2-immunoglobulin_lamb Sp1-t-PA Oct-1-Ocr HrpF-rpL14
su(Hw)-MHC_class_II_DPA Ets-site_A_(17) E74EF-site_B E74EF-site_C E74A-consensus
DRA-W-element V21_element RAP1-CS ISGF-3-IFI-56K ATF-E4_(1) Ly6E/A-CCAAT
Ly6E_differentiation_antigen-2 PPR1-dependent-REB1 GA-BF-URA3 SV40-MBS-I
TCR-beta-site-1 AP-1-TCRBV17 TCR-betaE2 TCR-betaE3 TCR-beta-site-2 BAF1-PYK1
MLC-3'-enhancer-1 Myf-3-MLC globin-HS2-NFE2-right Sp1-CRE-BP1_(1) Sp1-CRE-BP1_(2)
AP-2-CRE-BP1 Sp1-CRE-BP1_(3) CRE-BP1-CRE-BP1_(1) Sp1-CRE-BP1_(4) CRE-BP1-FP-B
CRE-BP1-FP-A Sp1-CRE-BP1_(5) Sp1-CRE-BP1_(6) Sp1-CRE-BP1_(7) Sp1-CRE-BP1_(8)
CRE-BP1-CRE-BP1_(2) Sp1-CRE-BP1_(9) Sp1-CRE-BP1_(10) Sp1-CRE-BP1_(11) NFE-6-GPC
GATA-1-GPC_(1) GATA-1-GPC_(2) Sp1-GPC_(1) GPC-U2/CAC Sp1-GPC_(2) GATA-1-GPC_(3)
Sp1-TGF-alpha Ftz-artificial_sequence_(1) MyoD1-alpha-actin NF-E2/AP-1-beta-globin
MMTV-F1a H2B-abp-1-H2B CREB-glucagon C/EBP-SAA3 C/EBP-albumin_(4) AGP-site_B
AGP-site_A AP-2-type_IV_collagenase (NF-kappaB)-complement_C4 XF1-cytochrome_P-450c
A5CE-2_element C/EBP-complement_C3 complement_C3-FP-I Zmhox1a-Sh_(1) Zmhox1a-Sh_(2)
Zmhox1a-Sh_(3) Ubx-artificial_sequence-1 Ubx-artificial_sequence-2 Ubx-artificial_sequence-3
Ubx-consensus Dfd-consensus hsg_operator En-artificial_sequence Prd-artificial_sequence-1
gt2 Gt-eve Bcd-eve Cad-ftz Ubx-artificial_sequence-4 Ubx-dpp_(2)
Ftz-Antp Ftz-artificial_sequence_(2) Ftz-artificial_sequence_(3) Ftz-artificial_sequence_(4)
Ftz-artificial_sequence_(5) Ftz-artificial_sequence_(6) Ftz-artificial_sequence_(7)
Ftz-artificial_sequence_(8) Ftz-artificial_sequence_(9) Ftz-artificial_sequence_(10)
Ftz-artificial_sequence_(11) Ftz-artificial_sequence_(12) Ftz-artificial_sequence_(13)
Ftz-artificial_sequence_(14) Ftz-artificial_sequence_(15) Ftz-artificial_sequence_(16)
Ftz-artificial_sequence_(17) Ftz-artificial_sequence_(18) Ftz-artificial_sequence_(19)
Ftz-artificial_sequence_(20) Ftz-artificial_sequence_(21) Ftz-artificial_sequence_(22)
Ftz-artificial_sequence_(23) Ftz-artificial_sequence_(24) Ftz-artificial_sequence_(25)
Ftz-artificial_sequence_(26) Ftz-artificial_sequence_(27) Ftz-artificial_sequence_(28)
Ftz-artificial_sequence_(29) Ftz-artificial_sequence_(30) Ftz-artificial_sequence_(31)
Ftz-artificial_sequence_(32) Hb-BRE_1 Hb-BRE_2 Hb-BRE_3 fAE2B/_CDRE fAE3/_A-R_region
fRE1/_A-R_region fDE1/_A-R_region C/EBP-CPSI COL1A1-A1 COL1A1-A2 COL1A1-B1
EF-C-HBV Sp1-malic_enzyme DRE/MPE-2 TAF-malic_enzyme TAF-consensus lysozyme-E-2.7_kb_(1)
lysozyme-E-2.7_kb_(2) lysozyme-E-2.7_kb_(3) lysozyme-E-2.7_kb_(4) lysozyme-E-2.7_kb_(5)
lysozyme-E-0.2_kb_(1) lysozyme-E-0.2_kb_(2) lysozyme-E-0.2_kb_(3) lysozyme-E-0.2_kb_(4)
lysozyme-E-0.2_kb_(5) lysozyme-E-0.2_kb_(6) KBF1-artificial_sequence KBF2-artificial_sequence
Sp1-rpS16 rpS16-undefined-site MLV-T3RE SBF-U1_snRNA A5CE-1 C/EBP-apoVLDL_II
Sp1-gamma-globin_(1) adipsin-undefined-site adipsin-N-box MHC_class_I_H-2Kbm1_-undefined
c-Myb-artificial_sequence-1 c-Myb-artificial_sequence-2 Kr-consensus_(2)
Hb-consensus-1 Hb-consensus-2 Kr-consensus_(1) Kr-hb Sp1-gamma-globin_(2)
Antp-Ubx_(2) Hox-1-HIV-2 Hox-1-Hox-1.3_(1) Hox-1-Hox-1.3_(2) Hox-1-consensus
GCF-beta-actin_(1) GCF-beta-actin_(2) GCF-EGF_receptor GCF-CANP GCF-consensus
AhR-CYP1A1_(1) AhR-CYP1A1_(2) AhRE3 AhR-CYP1A1_(3) AhR-CYP1A1_(4) AhR-CYP1A1_(5)
alpha-URE AhR-consensus_(1) AF-1-apoCIII ATF-cytochrome_C NRF-1-cytochrome_C
Sp1-cytochrome_C URTF-steroid_11beta-OHase CREB-alphaA-crystallin Sgs3-TATA
ER-vitellogenin_B1 c-Fos-artificial_sequence NF-kappaB-Ig-kappa NRF-1-COX-VIc-2
NRF-1-ubiquinone-binding_prote NRF-1-mitochondrial_RNA_proces MLC-undefined-site
AP-1-alpha1-protease_inhibitor alpha1-PI-NE C/EBP-alpha1-protease_inhibito
apoB-100-FP-E CD28RC-IL-3 NF-GMa-IL-5 TF68-E2-early_promoter DRTF1-E2-early_promoter_(2)
DRTF2-E2-early_promoter TCR-beta-site-3 TCR-beta-site-4 TCR-beta-site-5
TCR-beta-site-6 HEF-1T-S14 AP-2-HTLV-I_(1) HEF-1B-HTLV-I HEF-1T-HTLV-I_(1)
AP-2-HTLV-I_(2) AP-2-HTLV-I_(3) HEF-1T-HTLV-I_(2) Sp1-HTLV-I NF-1-HTLV-I
HEF-4C-HTLV-I GG-II/GG-I SGF-1-fibroin FBF-A1-fibroin AhR-consensus_(2)
SRY-IRE-A Nit2-nit-3-1 Nit2-nit-3-2 Nit2-nit-3-3 Nit2-niaD-1 Nit2-niaD-2
Nit2-niaD-3 Oct-1-IE-2 AP-1-IL-3 NIP-IL-3 Oct-1-IL-3 C/EBP-HBV_(1) HBV-FPII
HBV-enhancer-II-box-alpha C/EBP-HBV_(2) HBV-box-beta C/EBP-HBV_(3) C/EBP-HBV_(4)
C/EBP-HBV_(5) HBV-EnII-FP Pln-II-undefined-site TFIID-MBP kappaY CD2-CD2E1
CD2-CD2E2 CD2-CD2E3 CD2-CD2E4 CD2-CD2E5 CD2-CD2E6 PTF1-IDE C-P450-CTE RAP1-artificial_sequence-2
RAP1-artificial_sequence-3 RAP1-artificial_sequence-4 RAP1-artificial_sequence-5
RAP1-artificial_sequence-6 RAP1-artificial_sequence-7 RAP1-artificial_sequence-8
RAP1-artificial_sequence-9 RAP1-artificial_sequence-10 RAP1-artificial_sequence-11
RAP1-artificial_sequence-12 RAP1-artificial_sequence-13 RAP1-artificial_sequence-14
GF1-JCVE Tst-1-JCVE myH-negative_element HNF-1-CYP2E1 CYP2E1-undefined-site
CBF-CYP2E1 Talpha1_site Talpha3_site Talpha4_site GATA-2-ET-1 RAP1-ENO2
Pax-1-artificial_sequence-1 Pax-1-artificial_sequence-2 Pax-1-artificial_sequence-3
Pax-1-artificial_sequence-4 Pax-1-artificial_sequence-5 Pax-1-artificial_sequence-6
Pax-1-artificial_sequence-7 Prd-artificial_sequence-2 Prd-artificial_sequence-3
ATF-7S_L_RNA RRE-DR-FPV RRE-DR-FPIV RRE-DR-FPIII R-IR4_(1) R-IR4_(2) glutelin-box-V
glutelin-box-IV glutelin-box-III glutelin-box-II glutelin-box-I Oct-1-c-abl/type_I
gamma-globin-3'-enhancer-PPUR 3'-enhancer-3 A-gamma-globin-3'-enhancer-4
A-gamma-globin-3'-enhancer-5 A-gamma-globin-3'-enhancer-6 A-gamma-globin-3'-enhancer-7
A-gamma-globin-3'-enhancer-8 A-gamma-globin-3'-enhancer-9 JCVE-undefined-site_(2)
BCR-undefined-site-1 BCR-undefined-site-2 BCR-undefined-site-3 BCR-undefined-site-4
BCR-undefined-site-5 BCR-undefined-site-6 BCR-undefined-site-7 BCR-undefined-site-8
BCR-undefined-site-9 BCR-undefined-site-10 BCR-undefined-site-11 Sp1-thymidine-kinase
CRE+JRE dl-zen-fragment-5 dl-zen-fragment-6 dl-zen-fragment-7 RKBP-GH_responsive_element
RAR-beta-complement_factor_H Sp1-TPI_(1) Sp1-TPI_(2) Sp1-TPI_(3) CP2-artificial_sequence
FRG-hsp70 UAS2UP1_(2) EFI-MHC_class_I_H-2Kb c-Krox-a1(I)-collagen IF1-alpha1_(2)
alpha-CP1-alpha-globin alpha-CP1-artificial_sequence2 alpha-CP1-artificial_sequence3
alpha-CP1-artificial_sequence4 alpha-CP1-artificial_sequence5 alpha-CP1-artificial_sequence6
alpha-CP1-artificial_sequence7 alpha-CP1-artificial_sequence8 GATA-1-alpha-globin_(1)
GATA-1-alpha-globin_(2) GATA-1-alpha-globin_(3) GATA-1-alpha-globin_(4)
GATA-1-alpha-globin_(5) AP-1-alpha-globin CP1-gamma-globin_(2) GATA-1-delta-globin_(1)
GATA-1-EpoR_(1) GATA-1-artificial_sequence neu-E1A-responsive_element EBP-80-IAP_LTR
IRE_site_I sTnI_-undefined-site GEBF-I-Sgs3_(1) GEBF-I-Sgs3_(2) CREB-PUT1
Oct-1-IL-8 NF-kappaB-IL-8 HNF-1-IGFBP-1 Ad-E3-kappa-2 E3-kappa-1 NF-kappaB-artificial_sequence
NF-kappaB-artificial_sequence2 RAP1-PDC1 PBGD-initiator NF-kappaB-TNF-beta
PEBP5-A_enhancer BAF1-ARS120 ER-calbindin_D-9K fibronectin-CRE-260 BC-R2-undefined-site1
BC-R2-undefined-site2 ICP4-glycoprotein_gD_(1) ICP4-glycoprotein_gD_(2)
ISRE_CS opaque-2-albumin_b-32_(1) opaque-2-albumin_b-32_(2) opaque-2-albumin_b-32_(3)
opaque-2-albumin_b-32_(4) opaque-2-albumin_b-32_(5) opaque-2-consensus
GST-P-site-0A GST-P-site-0B GST-P-GPS1 GST-P-FP-2 GST-P-FP-3 GST-P-GPS4
GST-P-FP-5 GST-P-FP-6 GST-P-FP-7 apoVLDLII-site_F_(6) apoVLDLII-site_D_(11)
IL2-TCEd AP-1-IL-2_(1) AP-1-IL-2_(2) TH2A-hexamer-site Apo-I-site_B_(15)
Apo-I-site_C_(13) ADR1-CTA1 AP-1-artificial_sequence_(1) albumin-site-eA
albumin-site-eB albumin-site-eC albumin-site-eD albumin-site-eE albumin-site-eF
albumin-site-eI albumin-site-eJ albumin-site-eK PHO8-site-2 CPC1-cpc-1
cpc-1-undefined-site CPC1-trp3 proenkephalin-B2 kappaE3-CRE LyF-1-Ig-kappa
UHF-1-EH4 UHF-1-LH4 PFK-2/FBPase-2-site-VI_(1) PFK-2/FBPase-2-site-VI_(2)
PFK-2/FBPase-2-site-V PFK-2/FBPase-2-site-IV PFK-2/FBPase-2-site-III NF-1-PFK-2/FBPase-2-site-II
NF-1/L-PFK-2/FBPase-2-site-I MHC_class_II_Ebeta-undefined-s PR-progesterone_receptor_(1)
PR-progesterone_receptor_(2) PR-progesterone_receptor_(3) PR-progesterone_receptor_(4)
mitochondrial-D-loop-site myc-CF1-c-myc_(2) myc-CF1-alpha-actin Oct-1-N-ras
gammaF-crystallin-CCR RAR-beta-ADH3 MLC-2-undefined-site EcR-consensus_(1)
Hb-en_(1) Hb-en_(2) Dfd-zein_storage_protein_22Z-1 Dfd-Dfd_(1) Dfd-Dfd_(2)
Dfd-Dfd_(3) MAS/EVE-D DENF1-eve Eve-EVE-P DENF2-eve DENF3-eve AP-1-DNA_polymerase_alpha
EIIaE-A-DNA_polymerase_alpha CP1-DNA_polymerase_alpha R1-Thy-1_(1) Sp1-Thy-1
CP1-Thy-1 R1-Thy-1_(2) Thy-1-FP-VIII MBP-1-c-myc BCFII-chorion_genes BCFI-chorion_genes
Sp1-AS_(1) Sp1-AS_(2) RVF-neu LAC9-cUAS stromelysin-undefined-site stromelysin-TRE/nRARE
c-jun-FP1 c-jun-FP2 ssARS-T-ARS307 NF-1-artificial_sequence C/EBP-proliferation-associated
CEBF-cTNT glutelin-core-site Yi-tk_(1) Yi-tk_(2) E-box-L-site-CS MyoD-MLC-B
MyoD-MLC-C chs-box-I chs-box-II chs-box-III TBP-P-element P-element-transposase-site
AP-1-artificial_sequence_(2) apoA-I-EpRE/ARE apoAI-IRCE histone_H4t-undefined-site
VITF-RS GATA-1-GATA-1_(2) GATA-1-FP-12 GATA-1-FP-11 GATA-1-FP-10 GATA-1-FP-9
GATA-1-FP-8 GATA-1-GATA-1_(3) GATA-1-FP-6 GATA-1-FP-5 GATA-1-FP-4 GATA-1-FP-3
GATA-1-FP-2 GATA-1-FP-1 Pit-1-TSHB_(1) Pit-1-TSHB_(2) nT3RE_(3) p53-MARE
NF-1-aP2 TCF-1alpha-TCR-alpha mdg1-minimal-promoter E-box+CArG3_box MP4-MMTV
MMTV-F2 MMTV-HRE-III epsilon-globin-undefined-site1 GATA-1-epsilon-globin_(1)
GATA-1-epsilon-globin_(2) epsilonF1-epsilon-globin Sp1-epsilon-globin CP1-epsilon-globin
epsilon-globin-undefined-site2 epsilon-globin-initiator gERE/_gastrin_EGF-reponse_elem
Sp1-vitellogenin_II RAP1-rpL16 IRF-1-IL-7R NF-1-tPA NGFI-A-C/EBP-site Sp1-C/EBP
C/EBP-C/EBP-alpha C/EBP-p21waf1/cip1 NF-IL6-IL-6 TAT-undefined-site-4 TAT-undefined-site-5
C/EBP-TAT_(1) HNF-3-TAT_(1) C/EBP-TAT_(2) C/EBP-TAT_(3) C/EBP-TAT_(4) HNF-3-TAT_(3)
TAT-undefined-site-6 TAT-undefined-site-7 C/EBP-TAT_(5) C/EBP-TAT_(6) C/EBP-TAT_(7)
HNF-3-TAT_(2) C/EBP-TAT_(8) C/EBP-E4 Yi-consensus TBP-MLP TBP-DHFR TBP-rpL32
TBP-IRF-1 TBP-CYC1 TBP-IVa2 GFAP-TATA_box HIV-1-LBP-site_II HIV-1-site_I
U6_snRNA-TATA_box YY1-P5_(2) YY1-P5_(3) c-Myb-pseudorabies_virus apoC-III-proximal_region/_B
Pit-1-CS-1_(1) Pit-1-CS-1_(2) T3R-CS-1 transferrin-DR0 MT-IF-MRE-d/MRE-c
MT-IG-MRE-e MT-IG-MRE-b ovalbumin-SDRE-region DHS_E_(3) DHS_B_(1) porphobilinogen-DHS_B_(2)
DHS_C_(1) DHS_C_(2) DHS_D_(1) DHS_D_(2) PGK-1-undefined-site-1 ENKTF-1-PGK-1
GATA-1-undefined-site-12 GATA-1-undefined-site-13 erythropoietin-undefined-site1
erythropoietin-OL-37 c-Myc-artificial_sequence-1 c-Myc-artificial_sequence-2
c-Myc-artificial_sequence-3 c-Myc-artificial_sequence-4 c-Myc-artificial_sequence-5
c-Myc-artificial_sequence-6 c-Myc-artificial_sequence-7 c-Myc-artificial_sequence-8
c-Myc-artificial_sequence-9 TFEB-artificial_sequence-1 TFEB-artificial_sequence-2
TFEB-artificial_sequence-3 distal_region_II/_H distal_region_II/_G distal_region_II/_F
distal_region_II/_E distal_region_II/_D proximal_region/_C proximal_region/_A
distal_region_I/_N GATA-1-gamma-globin_(4) HB1/HB2 GATA-1-GPB ER-progesterone_receptor_(1)
PR-progesterone_receptor_(5) PR-progesterone_receptor_(6) ER-progesterone_receptor_(2)
NF-kappaB-ELAM-1 AmdR-amdS AnCF-amdS TS-CIII TS-undefined-site-2 Sp1-TS_(2)
Sp1-BPV-1 HBP-1a-dbp HBP-1a-nitrate_reductase HBP-1a-legumin_A AR-prostatein_C3
Sp1-insulin_receptor COL1A1-undefined-site-2 alpha1-undefined-site-3 AP-1-TIMP
EcR-hsp23 MAPF1-MLC HAP1-CYB2 HAP1-consensus EMF1-XActin Oct-2-artificial_sequence
PD1-enhancer_E1 PD1-silencer_S1/_S2 NF-kappaB-gro-gamma E1A-E2F-motif GATA-1-EpoR_(2)
Sp1-EpoR PAI-2-undefined-site-1 PAI-2-CRE-element PAI-2-undefined-site-3
AP-1-PAI-2 PAI-2-undefined-site-4 Sp1-PAI-2 PAI-2-undefined-site-5 NBF-INO1_(1)
NBF-INO1 NBF-INO1_(2) Sp1-HTF9 uteroglobin-undefined-site-1 uteroglobin-undefined-site-2
uteroglobin-undefined-site-3 uteroglobin-undefined-site-4 uteroglobin-element-VI
uteroglobin-undefined-site-6 uteroglobin-undefined-site-7 uteroglobin-element-IV
uteroglobin-element-III uteroglobin-undefined-site-10 uteroglobin-element-II
uteroglobin-element-I SRF-cyr61 crystallin-HN_segment HCMV-18_bp_repeat_(2)
HCMV-18_bp_repeat_(3) HCMV-18_bp_repeat_(4) Sp1-junD junD-TRE Sry-beta-genomic-1
Sry-beta-genomic-2 Sry-beta-genomic-3 Sry-beta-genomic-4 Sry-beta-consensus
Sry-delta-genomic-1 Sry-delta-genomic-2 Sry-delta-genomic-3 Sry-delta-genomic-4
Sry-beta-genomic-5 Sry-delta-consensus CRE/enhancer_B_domain/BI DSXF-FBE/_B_(1)
DSXF-FBE/_B_(2) BRLF1-negative-element-1 BZLF1-negative_element alpha1-AGP-Ybox/Zbox
ssDBP-1-histone_H4 NF-muE1-IE_(1) Oct-1-IE NF-muE1-IE_(2) NF-muE1-IE_(3)
NF-muE1-IE_(4) NF-muE1-IE_(5) NF-muE1-IE_(6) IE-undefined-site EF-C-IE1
c-fos-undefined_site_(1) ATF-E4_(2) ATF-artificial_sequence_(1) ATF-artificial_sequence_(2)
ATF-artificial_sequence_(3) NF-1-betaM-globin AP-1-aldolase_A aldolase_A-undefined-site-1
aldolase_A-undefined-site-2 Sp1-aldolase_A sevenless-enhancer-FP-5 sevenless-enhancer-FP-6
sevenless-enhancer-FP-4 sevenless-enhancer-FP-3 sevenless-enhancer-FP-2
sevenless-enhancer-FP-1 dl-twi_(5) dl-consensus_(1) CD14-IRE NRF-2-ATP_synthase_beta-subuni
c-Ets-1-mb-1 BAF1-artificial_sequence CDP/Cut-gp91-phox-5' LF-B1-APN GATA-1-delta-globin_(2)
HBF-C_enhancer/_FPI HBV-C_enhancer/_FPII GATA-1-beta-globin_(4) CUP2-SOD1
HAP1-CYT1 XPF-1-amylase_2A_(1) XPF-1-amylase_2A_(2) USF-CS LyF-1-Ig-lambda-1
LyF-1-Ig-lambda-2 LyF-1-lck-1 LyF-1-lck-2 IgHV1-undefined-site-1 AP-1-IL-2_(3)
PR-artificial_sequence-1 GR-artificial_sequence_(1) chs15-G-box mmp-1_TRE
GR-artificial_sequence_(2) GR-alpha-2u_globulin_(1) GR-alpha-2u_globulin_(2)
GR-HIV-1 TAT-GRE GR-IL-6 IL-6-undefined-site TATA_box_(4) TATA_box_(5)
GR-osteocalcin PR-artificial_sequence-2 ovalbumin-box_D ovalbumin-box_A
ovalbumin-box_B ovalbumin-box_C LEF-1-PS2 SRY-SRY_(1) SRY-SRY_(2) SRY-artificial_sequence-1
SRY-artificial_sequence-2 SRY-artificial_sequence-3 MEF-2-artificial_sequence
MEF-2-cTNT MEF-2-alpha-myosin_hc1 MEF-2-alpha-myosin_hc2 MEF-2-myosin_heavy_chain
SRF-artificial_sequence-1 SRF-artificial_sequence-2 RSRFC4-consensus STE2*
Olf-1-OMP_(1) Olf-1-OMP_(2) Sp1-OMP_(1) Sp1-OMP_(2) Sp1-OMP_(3) Olf-1-consensus
Olf-1-OcNC U_box Olf-1-AC-III Olf-1-50.06 Olf-1-Golf HNF-3gamma-artificial_sequence
MNF1-35S_RNA MNB1b-35S_RNA MNF1-PEPCK GBF1-adh IF1-LpS1beta NF-muNR-prot_1
NF-muNR-prot_2 NF-muNR-prot_3 NF-muNR-prot_4 NF-muNR-consensus beta-1-beta-zein_gZ15A
SEF1-beta-conglycinin-site-1 SEF4-beta-conglycinin-site-1 SEF1-beta-conglycinin-site-2
SEF4-beta-conglycinin-site-2 SEF4-consensus SBF-1-consensus motif_I TAF-1-artificial_sequence
TAF-1-rbcS-611 DSC1-CDC9 CD28RC-IL-2 EBF-mb-1 EBF-MHC_class_II_Ia_Aalphad
ICP4-consensus phyA3-undefined-site-1 phyA3-undefined-site-2 phyA3-undefined-site-3
phyA3-undefined-site-4 phyA3-undefined-site-5 phyA3-undefined-site-6 phyA3-undefined-site-7
AS-C-ac pF13-artificial-sequence Egr-1-ADA NF-kB-SAA1-CRU CCBF-CLN2 TBF1-RS
BUF-HO abaA-yA_(1) abaA-abaA_(1) abaA-abaA_(2) abaA-abaA_(3) abaA-abaA_(4)
abaA-abaA_(5) abaA-brlA_(1) abaA-brlA_(2) abaA-brlA_(3) abaA-brlA_(4) abaA-wetA_(1)
abaA-wetA_(2) abaA-wetA_(3) abaA-wetA_(4) abaA-yA_(2) abaA-rodA_(1) abaA-rodA_(2)
abaA-rodA_(3) abaA-rodA_(4) abaA-rodA_(5) abaA-TMP1 abaA-brlA_(5) MLS1-undefined-site
YAP1-TRX2_(1) YAP1-TRX2_(2) cdt1-undefined-site-1 CDC10-cdt1 cdt1-undefined-site-2
GAL2-undefined-site AMT1-AMT1 BAF1-CHA1 hypoxic_CS INO2-artificial_sequence
Rox1-HEM13-4 PHO2-HO_(1) PHO2-HO_(2) NF-1-WAP NF-1-consensus E2F-E2-early_promoter
HNF-1-undefined-site IgHC-undefined-site-3 GATA-1-MC-CPA T3R-alpha-MBP
snRNP-E-hexamer-site-1 snRNP-E-hexamer-site-2 GR-ANF alpha1-undefined-site-4
C/EBP-artificial_sequence_(1) SKO1-SUC2 ATF-1-Igh-I-alpha Isl-1-somatostatin
Isl-1-somatostatin-2 CRE-BP1-TGF-beta2 TEF-TSH-beta_(1) TEF-TSH-beta_(2)
TEF-TSH-beta_(3) TEF-prl ODC-CRE2 RXR-alpha-HBV OL-12/T3RE Sp1-CS-B T3R-beta-EGF_receptor
NGFI-B-artificial_sequence RXR/RAR-ambiguous PPAR-3KAT USF-Vmw65 NF-1-tenascin
NF-1-alpha1_(2) NF-1-COL1A1 PRP-PHR1 c-Myb-HTLV-I_(1) c-Myb-HTLV-I_(2)
c-Myb-HTLV-I_(3) c-Myb-HTLV-I_(4) TFIID-ADA REB1-consensus tPA-undefined-site
fibronectin-undefined-site-1 Sp1-fibronectin AP-2-fibronectin fibronectin-undefined-site-2
C/EBP-artificial_sequence_(2) PU-artificial_sequence-1 PU-artificial_sequence-2
PU-artificial_sequence-3 PU-artificial_sequence-4 c-Ets-1-SC1 c-Ets-1-SC2
c-Ets-1-SC3 c-Ets-1-SC4 c-Ets-1-SC5 c-Ets-1-SC7 c-Ets-1-SC8 c-Ets-1-SC9
c-Ets-1-SC10 c-Ets-1-SC11 Elf-1-GM-CSF cytochrome_P-450b/e-undefined- delta-consensus
c-Myb-c-myb Ig-lambda-E2-4-PU.1-site Ste11-consensus v-ErbA-CAII p300-artificial_sequence
p53-artificial_sequence E4BP4-consensus snail-consensus dorsal-consensus_(2)
CREB-consensus CRE-BP1-consensus CREB2/c-Jun_RS GCN4-consensus v-Maf-artificial_sequence
NF-E2/MafK_consensus v-Maf-synthetic-site-11 HNF-1-prothrombin_(1) HNF-1-prothrombin_(2)
Ku-GRP78 PGK-1-undefined-site-2 GCR1-PGK GCR1-ENO1 GCR1-PYK1 GCR1-ADH1
MIG1-GAL1-10 MIG1-GAL3 MIG1-GAL4 MIG1-MEL1 MIG1-MAL2R MIG1-MAL61-62_(1)
MIG1-MAL61-62_(2) MIG1-MAL63 MIG1-FBP1 MIG1-PDC1 MIG1-HAP4 MIG1-FPS1 E47-artificial_sequence
CP2-alphaA-globin_(1) CP2-alphaA-globin_(2) CP2-alphaA-globin_(3) CP2-alphaA-globin_(4)
CP2-consensus NP-TCII-SV40 NP-TCII-consensus MAF-alpha-lactalbumin MAF-BLG
GATA-1-gamma-globin_(5) GATA-1-gamma-globin_(6) CSBP-1-gamma-globin gamma-globin-undefined-site-4
CP1-gamma-globin_(3) GATA-1-gamma-globin_(7) TRF-artificial_sequence GAL4-artificial_sequence_(2)
MEF-2-PGAM-M ISG54-undefined-site AGP1-URE BOX-DNA CBF-hsp72-CCAAT NF-Y-consensus
CP2-CAAT CACCC-box_CS TCR-Vbeta8.1-CACCC-box-2 CF2-site connexin32-B2_element
COUP/EAR_CS CTC-element-1 DBP_site delta-EF1-site doublesex-site epsilon-PRE-II
E2-box kappa-E2_CS2 ICE_CS EBF/Olf-1_site EBF/Olf-1_site_2 ELP/SF1/FTZ-F1_site
EP_site Elk_CS2 c-myc-FUSE HFH-1_CS Fkh/HNF-3-subclass-CS Fos-basal-promoter-element
G-box/CA-element G-box/CA-element-2 Wnt-1-GC-box Giant_site Gli_site Grainyhead_site
PDGFA-TCC-motif Hen1_site HGF_repressor_site E2A-HLF_CS HMG-I(Y)-AP1-3
HNF-3-IRS-CS antp/en_homeodomain_site bicoid_site CPD/Cut-gp91-phox paired_CS
paired-Q9-CS IL-2/NRE-A optimal-Inr-sequence IRE-A_(3) IRE-A_(2) ISRE/VRE/PRDI_CS1
IRF-E J/S-element-CS K5_promoter_element Knirps_site ELA1-B-element-L-site
LPL-LSE6 LR1_CS LyF/Ikaros_site M_box_core_motif Maf-site-1 MRS-part-1
X-box X-box_(2) MD-consensus MBSI MBSII Myc/Max_CS MEF-2_CS2
MyTI-PLP MZF1-site-1 MZF1-CS NFE2/maf_CS NF-kappa-B_site NRF1_site NRF2_site
ROR-alpha1-CS p53_response_element Pax2/5/8_site PBX_consensus Runx_CS
PGBE PCE PSE-CS Spi-1/PU.1_CS PuF_site RCE_conserved_sequence
RARE/DR5_CS RARE/DR5_CS2 RVL3_B_domain S8_site serendipity_site CARG/SRE_site
Skn-1_CS Snail/Slug_CS Sprm1_site SSAP_site ADD1/SREBP_site tailless_site
Tat_site TCF/TPF_sites TFE3_site TSE/TRE/DR4_(1) TSE/TRE/DR4_(2) tramtrack_site
TTF2_site VDRE/DR3_site XRE JCV-B-1 Z_box Z_box_(2) NF-kB-idealized-site
CREB-chromogranin-B CREB-synapsin-I CREB-LDH CREB-aromatase CREB-fibronectin-2
STAT4-binding-site recA-positive-element NF-kB-PTX3 Sp1-Ku80_(1) Sp1-Ku80_(2)
AP-2-PD-1 nm23-H2-PD-1 Myc/max-PD-1 Pu.1-PD-1 CREB-secretogranin AP-2-MIP-A-1
AP-2-MIP-2 NF-Y-MHC-II-Ea NF-Y-MHC-II-EaY' NF-Y-MHC-Dra NF-Y-Dra-Y' NF-Y-MHC-11-Aa
NF-Y-MHC-11-Dqa NF-Y-MHC-11-Dpa NF-Y-MHC-11-Rb NF-Y-MHC-11-Drb NF-Y-MHC-11-Ab
NF-Y-MHC-11-Dqb NF-Y-MHC-11-Dpb NF-Y-MHC-11-Dpb-2 NF-Y-MHC-11-B-Lb NF-Y-Ii-P
NF-Y-Ii-D NF-Y-Ii-D-2 NF-Y-Mig NF-Y-GP-91-phox NF-Y-CD10 NF-Y-RAG-1 NF-Y-IL4-D
NF-Y-IL4-P NF-Y-IL4-P-2 NF-Y-Thy-1 NF-Y-Globin-alpha-1 NF-Y-Globin-alpha-2
NF-Y-Globin-alpha-3 NF-Y-Globin-alpha-4 NF-Y-Globin-alpha-5 NF-Y-Globin-zeta
NF-Y-Globin-gamma-D NF-Y-Globin-gamma-D-2 NF-Y-Globin-gammaD-3 NF-Y-Globin-gammaP-1
NF-Y-Globin-gammaP-2 NF-Y-Globin-gammaP-3 NF-Y-Globin-rho-3'E NF-Y-Coll-alpha2(I)
NF-Y-Coll-alpha-2(I)-2 NF-Y-Coll-alpha1(i) NF-Y-Osteopontin NF-Y-BSP NF-Y-Albumin
NF-Y-Albumin-2 NF-Y-Albumin-3 NF-Y-Albumin-4 NF-Y-ApoA-I NF-Y-Aldolase-B
NF-Y-Aldolase-B-2 NF-Y-Aldolase-B-3 NF-Y-TAT-P NF-Y-TAT-D NF-Y-gamma-GT
NF-Y-SDH NF-Y-Fibronectin NF-Y-Arg_Lyase NF-Y-Factor-VIII NF-Y-Factor-X
NF-Y-MSP SMP1_CS NF-Y-ALDH NF-Y-ALDH-2 NF-Y-ALDH-3 NF-Y-LPL NF-Y-LPL-2
NF-Y-LPL-3 NF-Y-ExoKII-D NF-Y-HexoKII-P NF-Y-FAS-P NF-Y-FAS-P-2 NF-Y-FAS-P-3
NF-Y-FAS-P-4 NF-Y-FAS-D NF-Y-FAS-D-2 NF-Y-FAS-D-3 NF-Y-TSP-1 NF-Y-FGF-4
NF-Y-FGF-4-2 NF-Y-alpha-1-chim INO2_RS_(ISRE) AP-2-alpha_CS lambda_boxA
WT1-artificial-site EGR1-high-affinity-site WT1-high-affinity-site NGFI-B-CYP21
SF-1-CYP21 CK-2-CYP21 TRF-binding-site AFT1_CS NF-Y-tr.hydr NF-Y-NakATPsea-3
NF-Y-PDGF-beta NF-Y-FerH NF-Y-MHC-IA2-B8 NF-Y-MCH-IA2-Cw2Ld NF-Y-MHC-IA2-B7
NF-Y-MDR1 NF-Y-MDR1-2 NF-Y-CYP1A1 NF-Y-c-Jun NF-Y-Grp78 NF-Y-Hsp70-P NF-Y-Hsp70-P-2
NF-Y-Hsp70-P-3 NF-Y-Hsp70-P-4 NF-Y-Hsp70-D NF-Y-Hsp70-D-2 NF-Y-ADH2 NF-Y-GPAT
NF-Y-FPP-D NF-Y-FPP-P NF-Y-HMG NF-Y-HSS NF-Y-SREBP2 NF-Y-GST28 NF-Y-GST-28-2
NF-Y-GHR NF-Y-CP2 NF-Y-CP2-2 NF-Y-beta-actin NF-Y-beta-actin-2 NF-Y-beta-actin-3
NF-Y-TK-D NF-Y-TK-D-2 NF-Y-TK-P NF-Y-TK-P-2 NF-Y-TK-P-3 NF-Y-Topo-II-alpha-I
NF-Y-Topo-II-alpha-I-2 NF-Y-Topo-II-alpha-I-3 NF-Y-Topo-II-alpha-II NF-Y-Topo-II-alpha-II-2
NF-Y-Topo-II-alpha-II-3 NF-Y-Topo-II-alpha-III-1 NF-Y-Topo-II-alpha-III-2
NF-Y-Topo-II-alpha-III-3 NF-Y-Topo-II-alpha-IV NF-Y-Topo-II-alpha-IV-2
NF-Y-Topo-II-alpha-IV-3 NF-Y-cdc25-3 NF-Y-cdc25-2 NF-Y-cdc25-1 NF-Y-cdc2-1
NF-Y-cdc2-1-2 NF-Y-cdc2-1-3 NF-Y-cdc2-2 NF-Y-cdc2-2-2 NF-Y-cdc2-2-3 NF-Y-Cyc1A
NF-Y-Cyc1A-2 NF-Y-Cyc1B1-D NF-Y-Cyc1B1-P NF-Y-E2F1-P NF-Y-E2F1-P-2 NF-Y-PLK
NF-Y-RRR2 NF-Y-HisH2B-D NF-Y-HisH2B-P NF-Y-HisH2B-D-2 NF-Y-HisH2B-P-2 NF-Y-HisH3.3
NF-Y-HisH3.3-2 NF-Y-HBV-S NF-Y-MSV-LTR NF-Y-RSV-LTR-P NF-Y-RSV-LTR-D NF-Y-ev2-RAV0
NF-Y-Ad-EIIl-II NF-Y-Ad-ML NF-Y-CMV-gpUL4 NF-Y-HSV-IE110K NF-Y-VZV-ORF62
NF-Y-MVM-P4 AncP-AmdS AnCP-TaaG2 AnCP-GatA AnCP-TaA HAP-2/3/5-CYC1UAS2
HAP-2/3/5-CIT1 HAP-2/3/5-COX6 HAP-2/3/5-CYT1 HAP-2/3/5-LPD1 HAP-2/3/5-COX5a
HAP-2/3/5-HEM1 HAP-2/3/5-ASN1 HAP-2/3/5-NADPG1.Deh. HAP-2/3/5-SOD2 epsilon-Globin-CCAAT
beta-globin-CCAAT beta-Globin-CCAAT-2 beta-Globin-CCAAT-3 GP91-phoxP-CCAAT
IL4-P1-element TopoII-alpha-V-CCAAT Topo-II-alpha-V-CCAAT-2 Fc-gamma-Rec1-CCAAT
Carboxyest-CCAAT CD14-CCAAT HSV-TK-CCAAT INO4-CS CUP1_UAS SKO1_RS HSF1_CS
HSF1_CS2 ROX1_CS Pho4p-RS-type-1 Pho4p-RS-type-2 SMP1-CS MAC1_RS PDR3_CS
ROX3_regulatory_element REB1_RS PHO4_RS LEU3_CS RLM1_CS PPR1_CS MET31/32_RS
enkephalin-upstream-site NF-Y-Topo-II-alpha-III RFX1-artificial-site NRSE
NRSE1 NRSE2 BDNF-CRS-I Est-vWF_site ExsA_CS_(1) paired_CS1 paired_CS2
AB1-core-element-A AB1-core-element-B XGRAF_RS Brn-3_RS Xbp1_CS conRTRE-CS
RTR-core-motif Msx1_CS CSRE_CS1 Elf-1-CS CYS-3_RS CYS-3_CS P2-promoter-US-1
P2-promoter-US-2 Lyl1/E2a_heterodimer_CS HNF-6_CS WIN_CS HFH-4_CS1 HFH-4_CS2
RAP1_RS hTBP-artificial-site HSF-calreticulin ESF-1_RS HCRE_core_sequence
GmAux28-1/Hex GmAux28-G-box GmAux-delta-1 GmAux-delta-4 Msx-2-OC mtRNAP-variant-RS-1
mtRNAP-variant-RS-2 mtRNAP-variant-RS-3 mtRNAP-variant-RS-4 mtRNAP-variant-RS-5
mtRNAP-variant-RS-6 mtRNAP-variant-RS-7 mtRNAP-variant-RS-8 mtRNAP-nonanucleotide-RS
carP-carAB CRP-gcd b0327-upstream_site Fur-fep Frn-hrsA CRP-b1036 b1112-upstream-site
IHF-pspA rspA-unknown-site b1776-upstream-sites CRP-flhD CRP-cdd CRP-yffE
CRP-gut IHF-yjdG CRP-ppiA yhiP-upstream-site CRP-mtlA yiaK-upstream-site
yidX-upstream-site Fnr-kdgT yihU/yihV_upstream_site CRP-proP HNF-4-DR2-4.3
HNF-4-DR2-4.8 HNF-4-DR2-5.7 HNF-4-DR2-5.11 HNF-4-DR1-4.1 HNF-4-DR1-4.2
HNF-4-DR1-4.4 HNF-4-DR1-4.5 HNF-4-DR1-4.6 HNF-4-DR1-4.7 HNF-4-DR1-4.10
HNF-4-DR1-5.1 HNF-4-DR1-5.2 HNF-4-DR1-5.4 HNF-4-DR1-5.5 HNF-4-DR1-5.6 HNF-4-DR1-5.8
HNF-4-DR1-5.9 HNF-4-DR1-5.12 HNF-4-DR1-5.13 HNF-4-DR1-5.14 HNF-4-DR1-5.16
HNF-4-DR1-5.17 rps3a-1-homol-D rps3a-2-homol-E rps3a-2-homol-D rps5-homol-E
rps5-homol-D rps6-1-homol-D rps7-homol-D rps8-homol-D rps9-homol-E rps9-homol-D
rps10-homol-E rps10-homol-D rps11-homol-E rps11-homol-D rps12-homol-D rps13-homol-E
rps13-homol-D rps14-homol-E rps14-homol-D rps17-homol-E rps17-homol-D rps15a-1-homol-E
rps15a-1-homol-D rps15a-2-homol-D rps23-homol-E rps23-homol-D rps28-homol-D
rps30-homol-D rp13-1-homol-E rp13-1-homol-D rp13-2-homol-D rp14-1-homol-E
rp14-1-homol-D rp15-homol-D rp17-1-homol-E rp17-1-homol-D rp17-2-homol-D
rp17a-1-homol-E rp17a-1-homol-D rp18-1-homol-D rp18-2-homol-D rp18-3-homol-E
rp18-3-homol-D rp19-homol-E rp19-homol-D rp110-homol-D rp111-homol-E rp111-homol-D
rp113-homol-E rp113-homol-D rp117-homol-E rp117-homol-D rp118-homol-E rp118-homol-D
rp122-homol-E rp122-homol-D rp123-homol-D rp123a-homol-E rp123a-homol-D
rp124-homol-E rp124-homol-D rp126-homol-E rps126-homol-D rp127a-1-homol-D
rp127a-2-homol-E rp127a-2-homol-D rp128-homol-D rp130-homol-E rp130-homol-D
rp132-1-homol-D rp132-2-homol-D rp138-homol-D rpaP1-1-homol-E rpaP1-1-homol-D
rpaP1-3-homol-E rpaP1-3-homol-D rpaP2-2-homol-E rpaP2-2-homol-D rp-homol-E-CS
rp-homol-D-CS rpa-homol-E-CS rpa-homol-D-CS UOX-CRE ExsA_CS_(2) AP-2_CS7
Eno1-RPG forkhead_CS2 E2F-6_RS BRE Smad3/Smad4_RS hFAST-1-ARE p62TCF_binding_site
Smad3-SBE Smad3-SB Ets-1/GABP-hTBP DMP1_CS ovalbumin-NRE-sequence Chirp-I_site
Abf1-SPT15 ZmHox2a_HD1_CS ZmHox2a_HD2_CS Hcm1p_CS HoxA-5-Smad4 Hyko-1
Hyko-2 Hyko-3 Hyko-4 Hyko-5 Hyko-6 Hyko-7 Hyko-8 Hyko-9
Hyko-10 Hyko-11 ATF3/Jun_element E2F4/DP_consensus pdhR_operator HNF-1-CS
Meis-Hoxb1-ARE Meis-Hoxb2-r4 CBF1_CS gamma-interferon-BED YY1-gamma-interferon-BED
NFAT-gamma-INF AP-1-gamma-INF NifA_site_(1) NifA_site_(2) Sp1-tyrosinase
vHNF-1-DR-1 m4-AP-1_site NF-kB-vimentin NF-IL6-vimentin Ren1c-PPE NF-kB-E-selectin_(1)
NF-kB-E-selectin_(2) NF-kB-E-selectin_(3) E2F_site_(2) HNF-1-guanylin OL1_repressor_site
OL3_repressor_site GHF1/Pit1-prl_(1) GHF1/Pit1-prl_(2) GHF1/Pit1-prl_(3)
GHF1/Pit1-prl_(4) GRE-prl GHF1/Pit1-prl_(5) GHF1/Pit1-prl_(6) GHF1/Pit1-prl_(7)
GHF1/Pit1-prl_(8) CPRF1-CPRF1 MarR-marR_(1) MarR-marR_(2) Sp1-XIST_(1)
YY1-XIST Elf-1_site NIP_site NF-IL3_site CD28/_CK1_site CK1_site CK2/_GATA3_site
AP-2-IL-3 RAP1-PDC_(1) RAP1-PDC_(2) RAP1-PDC_(3) RAP1/GCR1-PDC Q9-ISRE
pax6-Rh5 Sp1-Ku80_(3) Oct3-Ayu1 HNF-3-HNF3-alpha UF1-H3beta-HNF3-1 TTF1-HNF3alpha-1
KF-HNF3-alpha NF-1-HNF3-alpha_(1) TTF1-HNF3alpha-2 HNF-4-HNF-1 MT-I-MRE-e
MT-I-MRE-d MT-I-MRE-c MT-I-MRE-b MT-I-MRE-a HNF-1-XORF HNF-1-HBV HNF-1-HBV_(2)
HNF-1-XORF_(2) HNF-1-XORF_(3) Myb-tom-1A_(2) C/EBP-tom-1A Myb-tom-1A_(3)
Bicoid-GATA-1_(1) GATA-1-gamma-IRE Bicoid-GATA-1_(2) GATA-1-gamma-IRE-2
GABP-COXVb Sp1-COXIV Ets-COXIV-1 Ets-COXIV-2 NF-1-COX10 Sp1-COX10_(1) Sp1-COX10_(2)
Sp1-COX10_(3) Sp1-COX10_(4) COXIV-Sp1-repeats Pu1/SpiB-PD-1 90K-IRF-E C/EBP-obese
CaFA_site Shh-RARE-hs1 Shh-RARE-hs2 HNF-3b-Shh_(1) HNF-3b-Shh_(2) goosecoid-brachyury
Sp1-Vdac1 Sp1-Vdac2 AP-2-phospholipase_C_gamma1(1) AP-2-phospholipase_C_gamma1(2)
AP-2-phospholipase_C_gamma1(3) AP-2-phospholipase_C_gamma1(4) AP-2/Sp1-PLG
AP-2-phospholipase_C_gamma1(5) AP-2-phospholipase_C_gamma1(6) AP-2-phospholipase_C_gamma1(7)
AP-2-phospholipase_C_gamma1(8) AP-2-phospholipase_C_gamma1(9) SP1/AP2-phospholipase_C_gamma
AP2/_Sp1-VGF_(1) IL6RP-VGF_(1) IL6RP-VGF_(2) Sp1-VGF_(2) AP-2-VGF_(1) AP-2-VGF_(2)
AP-2-VGF_(3) AP-2-VGF_(4) AP2/_Sp1-VGF_(2) AP-2-VGF_(5) AP-2/Sp1-VGF_(1)
NF-KB-VGF AP-2_VGF AP-2/Sp1-VGF_(2) AP2GC_VGF_(1) Sp1_VGF AP2GC_VGF_(2)
AP-2-thrombomodulin AP-1-thrombomodulin C/EBP-cyclinD2 AP-1-cyclinD2 AP-2-cyclinD2_(2)
LEF1-Tabby CREB/ATF-gamma-PPT p53-14-3-3-sigma Sp1-prosaposin prosaposin-RORE
AP1HLH-rpIgR HNF-1-SGLT1 Rh50-Ets-1 Rh50-Ets-2 RAP1_site PU1/Spi1-macrosialin
PurR-purC-1 PurR-purC-2 E2F-E2F-1 GATA1-Bfsp1 Sox2-Bfsp1 AlphaCE2Maf-Bfsp1
NFE1-GPC Ets-WASP Ets/c-Rel-WASP Ets/cRel/PU1-WASP Tcf-matrilysin NF-Kb-p62
NF-Kb/Ets1-p62 AP-2-p62_(1) c-Myc-p62 Ets1-p62 MBF-p62 C/EBP-p62 NF1-p62
AP-2-p62_(2) Sp1-p62 Sp1-a1p-inhibitor_(1) Sp1-a1p-inhibitor_(2) Sp1-a1p-inhibitor_(3)
Sp1-a1p-inhibitor_(4) Sp1-a1p-inhibitor_(5) Sp1-a1p-inhibitor_(6) Sp1-a1p-inhibitor_(7)
Sp1-a1p-inhibitor_(9) Smad4-JunB hREN-CRE AniA-upstream-region FNR-AniA
STAT-beta-5-integrin STAT-beta-5-integrin-2 Rb-CAMLG ANF-CAMLG ANF/p53-CAMLG
bicoid-CAMLG Ets-1-Octa-1 Ets-1-Octa-2 bHLH-Mlsn1 Ets1-Fgf8 Msx2-Fgf8 CTCF-GAGA_site
HiNF-A-CTCF GATA-CTCF-1 GATA-CTCF-2 CTCF-Ebox_site Myb-CTCF CTCF-2Xocta
NF-1-CTCF Ets-CTCF-1 Ets-CTCF-2 CTCF-Ebox/CRE_site E2F-CTCF-1 INR/YY1/TFII-I-CTCF
E2F-CTCF-2 NF-kappaB-APP AP-2-APP AP-1-IHABP E2F-muCdc7-1 E2F-muCdc7-2
GATA-2-muCdc7 E2F-muCdc7-3 E2F-muCdc7-4 E2F-muCdc7-5 AP-2-HADHSC_(1) AP-2-HADHSC_(2)
AP-2-HADHSC_(3) Sp1-calpain_(1) Sp1-calpain_(2) Sp1-calpain_(3) IHF-nifH
AP-1-IL-1 AP-1-GAD67 cyclin-D2-prolactin-RE AP-1-CCR1-2 c-Myb/NFIL6-CCR1
Sp1-CCR1 NF-IL6-CCR1_(1) NF-kappaB-CCR1_(1) NF-IL6-CCR1_(2) AP-1-CCR1-1
NF-kappaB-CCR1_(2) alphaPal-EIF2S2 AP-1-TBXAS1 PEA-3-TBXAS1 AP-2-TBXAS1
PEA3-TBXAS1-2 AP-1-TBXAS1-2 PEA3-TBXAS1-3 D2R-RARE p107-E2F_site TFEC-PU.1-site-1
TFEC-PU.1-site-2 TFEC-PU.1-site-3 TFEC-PU.1-site-4 MyoD_site NF-kB-A1 Sp1-alpha-dystrobrevin_(1)
Sp1-alpha-dystrobrevin_(2) CreA_site_(1) CreA_site_(2) CreA_site_(3) CreA_site_(4)
AreA-hxB_(1) UaY-hxB_(1) UaY-hxB_(2) UaY/AreA-hxB AreA-hxB_(2) sigma22-algD
NF-kappaB-MMP9 Sp1-c-jun_(2) CTF/NF1-CF1-1 CTF/NF1-CF1-2 AP-1-CF1 AP-2/Sp1-CF1
CTF/NF1-CF1-3 AP-1-c-jun-2 CREB/ATF-c-jun Sp1-CD53 IL2R-PEA-3 IL2R-GT-box
IL2R-Ets hGamma-C-EBS mGamma-C-EBS NF-kB-galanin_(1) NF-kB-galanin_(2)
AP-2-mEH TTF-TPO-1 TTF-TPO-2 TTF-TPO-3 TTF-TPO-4 LFA1-albumin eHTF-albumin
HNF-1-albumin_(1) AP-2-p68-c-rel NFLB-p68-c-rel NFLB/_HIP1-p68-c-rel AP-1-involucrin-H2
AP-1-involucrin_2 AP-1-involucrin_3 HNF5-erk1 p53-erk1_(2) NF-IL6-erk1_(1)
NF-IL6-erk1_(2) Ets1-erk1 p53-erk1_(1) Myb-erk1 AP-2-erk1 AP-1-erk1 CTF/NF1-erk1
Sp1-erk1_(2) STAT6-gamma-IRE STAT5-gamma-IRE STAT4-gamma-IRE STAT1-gamma-IRE
STAT1-gamma-IRE-2 STAT1-gamma-IRE-2.2 gamma-interferon-T-box AP-2-gamma-IRE-BE
MCB SCB_(3) M14a M14b ECB M1a M3a M3b
M4 M5 M13 M26 M27 ABF1_CS2 AP-1_CS5 BAS2_consensus
CuRE_site CSRE_CS2 SCB_consensus GC/FAR_site_(1) HSTF_consensus_(1) HSTF_consensus_(3)
HSTF_consensus_(4) LEU3_consensus MCM1_consensus MAT-alpha-2_consensus
NBF_consensus PDR3_consensus PPR1_consensus PUT3_consensus ROX1_consensus
RME1_site repressor_of_CAR1_consensus T4C_consensus TEA1_consensus URSPHR_consensus
UASRAD_consensus UASINO_consensus SFF_consensus VDR-phospholipase_C_gamma_1
PBF-HBVI c-Myb_CS2 NGFI-A_CS Sil-B TSEP-1_site OSE1 HBV_ENII_B1
ATPA-E-box_element phyA3-RE1 CNTF_response_element_1 CNTF_response_element_2
PIRE PINA-E4 PINA-E7 PINA-E6 PINA-E5 PINA-E3 PINA-E2 PINA-E1
NAT-E3 NAT-E2 NAT-E1 HIOMT-A-E4 HIOMT-A-E3 HIOMT-A-E2 HIOMT-A-E1
HIOMT-B-E3 HIOMT-B-E2 HIOMT-B-E1 c-Myb_9bp_motif c-Myb-c-Erb-B2 c-Myb-c-Erb-B2_site_I
c-Myb-c-Erb-B2_site_2 c-Myb-c-Erb-B2_site_3 c-Myb-c-Erb-B2_site_4 c-Myb-c-Erb-B2_site_5
c-Myb-c-Erb-B2_site_6 Z[alpha]_binding_site ARE_PPRE TR2-aldolase-A HNF-3-element-N1
oct-element_N1 FAAR-PPRE PCE-2 Pbx-PSE_WT E2A-Pbx1_RS Hox/Pbs_RS Hox/Pbx_RS2
En/Pbs_RS CBF/CBPa-MCSFR CBFA2-MCSFR C/EBPa-MCSFR NFE3-gamma-globin-distal-CCAAT
TAK1-RE NF-CD4_RS NRF-1-cyt_c LDL-FP1 O/E-1_CS Roaz-9H2 Roaz-9H5 Roaz-9H11
Roaz-9H14 Roaz-9H7-1 Roaz-9L4 Roaz-9L5 Roaz-9L6 Roaz-9L10 Roaz-9L12 Roaz-9L15
Roaz-9l17 Roaz-9L18 SDI-A1 MyEF-3_RS alpha-globin-CCAAT HBV-B1-element
EKLF-beta-globin chkYB-2_RS PPAR-rAOX PPAR-rBifunctional_enzyme PPAR-rFABP
PPAR-CYP4A6 PPAR-rHMG-coA-synthase PPAR-rMalic-enzyme PPAR-rApo-CIII PPAR-hApo-CIII
PPAR-hTransferrin PPAR-hTf-PRI NCAM-site-a TPO-UFB Rox1-ANB1-1 Rox1-ANB1-2
Rox1-ANB1-3 Rox1-ANB1-4 Rox1-ROX1-1 Rox1-ROX1-2 MHC-EM H1t-GC-box-2 beta-globin-Inr
MCP-1-kappaB-1 MCP-1-kappaB-2 Sp100-ISRE ISG15-ISRE_(1) NFAT-FasL IL-9-PW2
NF-kB-IL-9 IL-9-CRE NFAT:AP-1_RS NFAT:AP-1_RS2 GPIX_GATA_site H4TF-1-FVII
HNF-4-FVII C/EBP-beta-FVII TNF-kappa3/CRE Egr-1/Krox-24-TNF-alpha GATA-3-IL-5
IL5-CLE1 IL5-G1-GATA TCR-alpha-GATA FKHRL1-FasL Ets/p53-p21 AldA-NRE-M3
p97-AldA-NRE NF-kB-MMP-9 NF-kB-FasL-kB1 NF-kB-FasL-kB2 NF-AT-FasL FEF-c-fes
PU.1-CXCR1 gp130-SBE c-fos-SIE RNR2-E2Fa RNR2-E2Fb/CDE GH3-AuxRE-D1 CYM-MSA
MSA_CS tyrD_US tyrD-URR gastrin-cis-regulatory-sequenc gastrin-AT-rich-site
gastrin-CACC-site gastrin-CACC CLC-GA-element YY1-involucrin-1 YY1-involucrin-2
involucrin-distal-element HIV-T3RE MRF-CMV-1-1 MRF-CMV-1-2 SRF-CArG-box-2
SRF-CArG-box-1 SV40-distal_site osZIP-1a-Em1a osZIP-1a-Em1b osZIP-1a-Em1c
EmBP-1-Em1a-1 EmBP-1-Em1a-2 EmBP-1-Em2a-1 EmBP-1-Em1b-2 EmBP-1-Em1c EmBP-1-Em1c-2
EmBP-1-Em1d-1 EmBP-1-Em1d-2 EmBP-1-Em2a EmBP-1-Em2a-2 REB-RS Atmyc1-Sph-box
VP1-C1 C1-ABA-element CAII-CS Nkx-2.5-GATA-6 CUP-GTbox-C/EBP-alpha C/EBP-alpha-TRE-1
Sp1-C/EBP-alpha p53-p21waf1/cip1 p21-TGF-beta-response_element BRLF1-negative-element-2
HLA-B7-ISRE ISG15-ISRE_(2) 6-16-ISRE_(1) mt-beta-LCK lck-repressive-element
osteocalcin-minimal-VDRE VDRE-augmenting-sequence chitinase-EIRE X1-GCC-box
CD44-ERE mSM22-alpha-TCE Evi-1-D1-CONS Evi-1-D2-CONS FN-GCE-A FN-GCE-B
ChORE_CS v-Maf-synthetic-site-2 CD155-FPII CD155-FPI NF-kB-CD155 EGFR-p53RE
CaRE-1 FAC1-FBE GL2-Myb-binding-site Rox1-HEM13-1 Rox1-HEM13-2 Rox1-HEM13-3
Rox1-AAC3-1 Rox1-AAC3-2 tenascin-TCE HMG-CoA-synthase-SRE-1 HMG-CoA-reductase-E-box
HMG-CoA-reductase-SRE_(1) SREBP-LDL-receptor-SRE-1 HMG-CoA-reductase-SRE_(2)
HMG-CoA-synthase-SRE-1-3-prime HMG-CoA-synthase-SRE-1-5-prime Oct-1-Ly6E/A
AP-2-EGFR-site-2 AP-2-EGFR-site-3 AP-2-EGFR-site-4 AP-2-EGFR-site-5 AP-2-EGFR-site-6
Sp1-ACCA Sp1-ACCA-2 HBP-1_CS H3-type-I-element 35SRNA-Site-2 35SRNA-Site-3
cTNT-M-CAT cTNT-M-CAT-2 beta-MHC-M-CAT-1 beta-MHC-M-CAT-2 beta-MHC-M-CAT-3
beta-MHC-M-CAT-4 alpha-MHC-M-CAT-1 alpha-MHC-M-CAT-2 MLC-2-M-CAT s/cTNC-M-CAT
VSM-alpha-actin-M-CAT skin-alpha-actin-M-CAT-1 skin-alpha-actin-M-CAT-2
AChR-beta-M-CAT PGAM-M-M-CAT c-mos-M-CAT-1 c-mos-M-CAT-2 AE3-channel-M-CAT
rBNP-M-CAT hBNP-M-CAT SIS-SPE TEF-4-CCT-alpha-Eb AtTRP1_RS_motif RTBP1_RS_motif
IBP1-RS BPF1_RS AtTRP1-AtTRPro glycine_response_element_CS DR4-TRE DR5-TRE
DR1-TRE CSEn2-FP1 CSEn2-FP2 CSEn2-FP3 CSEn2-FP4 CSEn2-FP5 CSEn1-DR.1 CSEn1-DR.2
prolactin-composite-element MORE PORE Ig-MORE IL-4-CPRE CDP/Cut-HLA-B7-1
CDP/Cut-HLA-B7-2 HLA-B7-repressor DBH-domain-I-2 DBH-domain-II-2 DBH-domain-III-2
DBH-PRS1 Probasin-ARE-1 Probasin-ARE-2 PSA-ARR PSA-ARE AR-KLK2 AR-C3-(Intron-1)
AR-C1 AR-Slp-1 AR-Slp-2 AR-Slp-3 AR-6-PF-2K-1 AR-6-PF-2K-2 AR-Factor-IX
AR-JRE AR-aldose-reductase AR-GUS hAR-ARE1A hAR-ARE2 AR-MMTV-distal
AR-MMTV-proximal HNF-6-r.hnf-3beta HNF-6-m.ttr HNF-6-r.pfk-2 HNF-6-r.pfk-2-GRUc
HNF-6-m.hnf-4 HNF-6-r.pepck HNF-6-r.alpha2-ug HNF-6-r.cyp2c13 HNF-6-r.cyp12c12
HNF-6-m.mup HNF-6-r.tog HNF-6-r.alpha-fp CSRE_CS MElk-CS POX1-UAS1 Sry-CS
Sox5-CS Sox17-CS Sox9-CS ECI-6/IkappaB-alpha-BS6 ECI-6/IkappaB-alpha-BS3
ECI-6/IkappaB-alpha-BS7 ECI-6/IkappaB-alpha-BS1 ECI-6/IkappaB-alpha-BS8
ECI-6/IkappaB-alpha-BS5 ECI-6/IkappaB-alpha-BS2 ECI-6/IkappaB-alpha-BS4
FATP-PL3 ZRE-B-protoenhancer IL-3-NIP-AP-2-site IL-3-NIP_(2) v-ErbA-consensus
COUP-TF-RE SPRE p53-MDR1-HT MDR1-HT-p53-site-1 MDR1-HT-p53-site-2 c-Myb-RRBE
TFII-I-TSSC RSV-TSSC MSEi M-box Stat92E-da Egr-1-MT1-MMP HNF-3-TTR_(2)
FHX-type-B-site FHX-hC4BPA FHX-type-A-CS rMT-III-motif-2 ceMT-I-motif-6
rMT-III-motif-7 rMT-III-motif-8 rMT-III-motif-9 ceMT-I-motif-11 pMT-motif-12
PTTG-Element-A PTTG-Element-B PTTG-Element-C mSI-SIF3 SIF4 MMP9-GT-box
PAI-site-2 PAI-site-4 PAI-site-5 PAI-forkhead-site PBX-PDX1-somatostatin
epsilon-NRB-FP1-human epsilon-NRB-FP1-galago epsilon-NRB-FP1-rabbit epsilon-NRB-FP1-mouse
epsilon-NRA-FP2 epsilon-NRA-FP3 epsilon-NRA-FP4 epsilon-NRA-FP5 Pax-6_RS
Pax-6-PD-CS Pax-2-PD-CS Pax-2/5/8-PD-CS NF-kB-TNF-alpha-873 NF-kB-TNF-alpha-873-SNP
HsaSRE2 MmaSRE2 XlaSRE2 CaSRE3 HsaSRE3 MmaSRE3 XlaSRE3 C/EBP-CFTR
alpha-Pal-HA alpha-Pal-LA Sgs3-proximal-element RAR-beta-RARE RAR-beta-COUP-RE
rCRBPII-RXRE_(2) mCRBP-II-RXRE HBV-RXRE MHC-RXRE AFP-RXRE lactoferrin-RXRE
RXRgamma2-RXRE HS2NF5-site globin-HS2-8790-E-box HS2-8711-E-box Ets-laminin
IgH-pi-site Erg-2-CS AP-2-apoE-site-1 Zic-BS2 Zic-BS1 Zic-BS3 c-Myc-TIE
c-Myc-RSBE Smad-c-Myc-GC-element Smad-c-Myc-GTCT-element MZF-CD34-site-A
MZF-1-CD34-Site-B MZF-1-CD34-Site-C SMHC-AT-rich-element alphaA-crystallin-PE2A
APP-APBbeta APP-APBalpha CSS-B CSS-A BRE-G4 BRE-G3 BRE-G2 BRE-G1
Ets/NF-kappa-B-CK2 Staf_CS2 ATBF1-MRF4 MRF4-A/E1 C1-anthocyanin-proximal
C1-anthocyanin-distal C1_CS Egr-1-apoAI-E2 Egr-1-apoAI-E1 FTF-AFP FTF-FTF
FTF-DR0 FTF-FTZ-F1 FTF-SF-1 FTF-LFB2 FTF-HNF-3-beta Nkx-2.8-AFP TGF-beta1-AP1-A
TGF-beta1-AP-1-B iNOS-PPAR-gamma-RE alpha-2-I-proximal-FP1 Sp3-COL2A1 Sp1-COL2A1-1
Sp1-COL2A1-2 Sp1-COL2A1-3 Sp1-COL2A1-4 Sp1-COL2A1-5 Sp1-COL2A1-6 Sp1-COL2A1-7
PCNA-motif-IIa PCNA-motif-IIb BIF-2 BIF-3 BIF-1 rCOL1A1-CYE mCOL1A1-CYE
hCOL1A1-CYE col1A1-RE1 col1A1-IR col1A1-Y-box-1 col1A1-Y-box-2 col1a1-Y-box-3
myc-AR AR-ARE1 AR-ARE2 hET1-5-prime hET1-middle VeZf1-ET-1 RSV-EF-II-RS
chkYB-2-RSV pannier_CS BSAP-RAG-2 hdio2-CRE neu-28bp-activator c-Myb-RAG-2
IL-5-PRE-2 Oct-C/EBP-IL-5 IL-5-BR-7 SFF-CLB2 MCM1/SFF-SWI5 vitA2-19bpERE
vitB1-ERE vitB1-ERE2 xER_CS ER-apoVLDL-II ER-apoVLDLII-ERE1 ER-ovalbumin
ER-angiotensin bcl-2-ERE-E-3 bcl-2-ERE-E-4 BRCA1-ERE calbindin-ERE cathepsin-D-ERE-E2
complement-C3-ERE complement-C3-ERE-2 complement-C3-ERE1 COX7RP-ERE ER-beta-ERE
efp-ERE Ha-ras-ERE alpha-2-microglobulin-ERE lactoferrin-ERE hPR-ERE-B
hPR-ERE-A hPR-ERE-2 quinone-reductase-ERE pS2-ERE VEGF-ERE Alu-ERE calbindin-D9k-ERE
ckb-ERE lh-B-ERE c-jun-ERE JUN5-ERE oxytocin-ERE oxytocin-C-3'-ERE prolactin-ERE-1
prolactin-ERE2 prolactin-ERE3 prolactin-ERE4 prolactin-ERE5 vasopressin-ERE
VEGF-5'-ERE VEGF-3'-ERE c-fos-ERE c-fos-3'-ERE osg-ERE uteroglobin-ERE
esg2-ERE esg2-ERE-2 Pit-1_B1 Pit-1_B2 Pit-1_a Pit-1_b Pit-1_c Pit-1_d
Prl-1P_(2) Prl-3P Prl-1D Prl-4D Pit-1-rGH-1 Pit-1-rGH-2 Pit-1-hGH-1
Pit-1-hGH-2 Pit-1-TSHbeta-1 Pit-1-TSHbeta-2 hGHRHR-P1 hGHRHR-P2 hTRHA-A
hTRHR-B SS1R_fp2 SS1R_fp4 GH-N_LCR-1 GH-N_LCR-2 GH-N_LCR-3 Oct-1/2-IgH
Oct-1/2-AdITR Oct-1/2-U2_snRNA Oct-1/2-H2B Oct-1-SV40_site_I rGnRH_FP2
rGnRH_FP4 Oct-1/2-TIE2 Oct-1-CYP1A1 TTF-1_BS1 TTF-1_BS2 PBP-C3 mGnRH_nGRE
Oct-1/2-PU.1 Oct-1/2-HPV16 Oct-1/2-HPV18 Oct-1/2-HPV1A#1 Oct-1/2-HPV1A#2
Oct-1/2-LPL Oct-1/2-Il-4 Oct-1/2-Il-3 Oct-1-Il-2 Oct-1/2-Il-1 Oct-1/2-CD11c_integrin
Oct-1/2-junD Oct-1-IIB_Myosin_HC Oct-1-Opioid_receptor Oct-1/2-Ly-6E Nestin-FP-1
Nestin-FP4 B-FABP-POU-site Brn-1/2-PN-1 Brn-2_AADC Brn-2_CRH-II Brn-2_CRH-V
Tst-1_rGnRH-104 Tst-1_rGnRH-151 Tst-1_rGnRH-333 Tst-1_P0-I Tst-1_P0-II
Tst-1_P0-IIIa Tst-1_P0-IIIb Tst-1_P0-IV Tst-1_consensus Tst-1_JC-site_A
Tst-1_JC-site_B Brn-4_D1A_R-1 Brn-4_D1A_R-2 Brn-4_Glucagon_G1 Rex-1
FGF-4 UTF1 OPN_PORE HSV_Oct CRH-II POMC_DE2 HSV/CRH/DE2_consensus
Brn-5_CS1 Brn-5_CS2 alphaMHC-PRE-B1 Adh-1-NRE1 C/EBP-ADH1-1 C/EBP-ADH1-2
choline-acetyltransferase-ERE Sp1-vitA1 IMPDH-POS IL-2-proximal-octamer
IL-2-ZIP-site IL2-NFAT-280 IL2-NFAT-160 IL2-NFAT-135 IL2-NFAT-45 Brn-3-CRH
ROM2-PHS-beta-C ROM2-PHS-beta-D ROM2-DLEC2A ROM2-DLEC2B ROM2-DLEC2C Ets-Rh50-distal
UME6_CS Prd_CS Pax8_CS Pax2_CS Pax5_CS Pax6_CS Ren1-c-element-a
C/EBP-beta-TNF-alpha IRF-3_CS IRF-7_CS STE12-mdscan-motif-1 STE12-mdscan-motif-2
STE12-mdscan-motif-3 STE12-mdscan-motif-4 GAL4-mdscan-motif-1 GAL4-mdscan-motif-2
RAP1-mdscan-motif RAP1-mdscan-motif-2 RAP1-mdscan-motif-15 RAP1-mdscan-motif-3
RAP1-mdscan-motif-4 RAP1-mdscan-motif-5 RAP1-mdscan-motif-6 RAP1-mdscan-motif-7
RAP1-mdscan-motif-8 RAP1-mdscan-motif-9 RAP1-mdscan-motif-10 RAP1-mdscan-motif-11
RAP1-mdscan-motif-12 RAP1-mdscan-motif-13 RAP1-mdscan-motif-14 LEF1/TCF3-Xtwn
CRH-nGRE GM-CSF-GM550 E2F-c-Myc-site-II CYP2A3-NPTA C-P450-SDI O1-2C7
O2-2C7 O3-2C7 O1-2C11 O1-2C12 O2-2C12 O3-2C12 O1-2C13 ApoCIIIB-HPF-1
HIV-XMAS sericin-SC sericin-SB sericin-SA Mbp1-mdscan-motif-1 Mbp1-mdscan-motif-2
Mbp1-mdscan-motif-3 Swi4-mdscan-motif-1 Swi4-mdscan-motif-2 Swi4-mdscan-motif-3
Swi4-mdscan-motif-4 Swi6-mdscan-motif-1 Swi6-mdscan-motif-2 Swi6-mdscan-motif-3
Swi6-mdscan-motif-4 Swi6-mdscan-motif-5 Swi6-mdscan-motif-6 Fkh1-mdscan-motif-1
Fkh1-mdscan-motif-2 Fkh1-mdscan-motif-3 Fkh2-mdscan-motif-1 Fkh2-mdscan-motif-2
Fkh2-mdscan-motif-3 Fkh2-mdscan-motif-4 Fkh2-mdscan-motif-5 Fkh2-mdscan-motif-6
Fkh2-mdscan-motif-7 Fkh2-mdscan-motif-8 Ndd1-mdscan-motif-1 Ndd1-mdscan-motif-2
Ndd1-mdscan-motif-3 Ndd1-mdscan-motif-4 Mcm1-mdscan-motif-1 Mcm1-mdscan-motif-2
PEPCK-AF1 PEPCK-AF2_(2) JCVE-B-domain apoA-I-DRE WT-COX1-Sp1 5-LO-RZR-RE
NF-E2-alpha-spectrin CCSP-upstream-HNF-3-site CCSP-downstream-HNF-3-site
C4B-F1 C4B-F2 mTbetaRII-EBS RBCS-I-box C/EBP-beta-COX-2 LEF-1-MITF-M
PDBF-ThRE hGPIIb-G139 hGPIIb-G39 GM-CD28RR-CK-1 GM-CD28RR-Sp1-site ME-IRE-II
uPA-US-domain-C_(2) crystallin-DE2B crystallin-DE1A Adh-NRE1 DLEC2-PvALF-RE
PvALF-RY-repeat Sp1-HCA PEPCK-AF3 HBV-FTF-site-1 HBV-FTF-site-2 MRF4-MEF2/TATA
MRF4-E1 vit-A1-io-US RAREoct ALAS2-CACCC mim-1-MRE-A mim-1-NE LUN_RS
Pho8-UASp2 Pho5-UASp2 SATB1-3'-MAR-site-IV RFX-COL1A2 delta-crystallin-HN-DC5
tll-hb-1 tll-hb-2 tll-hb-3 tll-hb-4 tll-hb-5 tll-hb-6 tll-hb-7 tll-hb-8
Sp1-integrin-alphaV beta-globin-CPS IRF-2-synthetic_site Ikaros_CS Ikaros-TdT-D'-element
hGPIIb-G514 hGPIIb-G463 hGPIIb-repressor ERR_extended_halfsite ERR-gamma-RS
lactoferrin-RARE/ERE 6-16-ISRE_(2) IL-8-RSVRE IRF4-kappa-B1 IRF4-kappa-B2
CD14-TLS Pho2-Pho5-site-1 Pho2-Pho5-site-2 Pho2-Pho5-site-3 Pho2-Pho5-site-4
Pho2-Pho5-site-5 Pho5-UASp1 Pho5-UASp2_(2) Pho4-Pho5-site3 AP3-CarG1 AP3-CArG3
Adh1-C Adh2-D Mi-CRE MRS-part-2 GAMyb-alpha-amylase P-box Athb-1-HD_site
Athb-2-HD_site HAHR1_CS Hahb-4_CS ipnA-PACC-A ipnA-PACC-B P450-BM-1-barbie_box
P450-BM-3-barbie-box P450-BM-3-OIII AGP-PBRE COMP1-CS HFH-1_RS HFH-2_RS
beta-MHC-beta-e2 Skn-1_RS AGP-HB claudin-2-CdxA claudin-CdxB CdxA_CS
Cdx2-CaBP9K GATE C/EBP-beta_CS RP58_CS EBS-1 Egr-1-IL-2R-beta Egr-1-PDGF-A
Egr-1-alpha-MHC Hox/Pbx_heterodimer_site ADA-FP2D Pdx-1-insulin-P1 EphA2-repeat-E
N-myc-RFT-I hN-myc-RORE mN-myc-RORE Myf-4-MEF2 MCK-MEF2 COLX-MEF2-like-sequence
Rox-1-Rex-1 SRR2 Ad4BP_CS Sp1/Sp3-hCG-beta AP-2-hCG-beta Cnc/Maf-S_CS
CAC-BF-CS Brn-2_CS1 C/EBP-delta-APRE spB-4bp Ptx-3-TH ROR-alpha-1_CS ROR-alpha-2_CS
PCI-iAP2 PCI-uAP2 PCI-dAP2 TOR-DR-4 TOR-DR-4/G TAL-1_consensus TAL-1/E2A_RS
beta-RARE-NBRE SAP-2-E74-M3 forkhead_CS STAT6-12/15-lipoxygenase STAT6-angiotensin
STAT6-c-gamma-1 STAT6-c-gamma-3 STAT6-CD23 STAT6-eotaxin STAT6-CD23b STAT6-IgH
STAT6-lymphotoxin-alpha STAT6-P-selectin STAT6-sIL-1Ra Sp1-ILGF-II apoA-I-RORE
Staf_CS CQE1 SAP-1_CS MyoD-MLC-A Brn-2_CS2 Brn-2_CS3 Brn-2_CS4 Brn-5_CS
COUP-EMILIN LEF-Vbeta-8.1 ERSE GRP78-ERSE1 GRP78-ERSE2 GRP78-ERSE3
TRE-DR4 TGF-beta2-FKH-site-1 TGF-beta2-FKH-site-2 TGF-beta2-FKH-site-3
Brn-2-OA25 apo-AI-E2 gamma-globin-hemin-induced stromelysin-I-PEA3 CYP2C2-HPF-1
stromelysin-SIRE MT-IG-MREa MT-IG-TATA tPA-TRE tPA-CTF/NF-I-site tPA-GC-box-I
tPA-GC-box-II tPA-GC-box-III Meq_CS1 Meq_CS2 Meq_CS3 PU.1-MBN C/EBP-hMBN
Myb-MBN C/EBP-mMBN siamosis-WntRE fibronectin-WntRE alphaI-collagen-3'FP1
alphaI-collagen-3'FP2 alphaI-collagen-3'FP3 K17-RE K14-RE K16-RE
K5-RE K6-RE Xag1-region-2 Xag1-region-3 MERE-I MERE-II hStAR-SREBP-site
mTH-Pitx-site-I mTH-Pitx3-site-II mTH-PitX3-site-III mTH-Pitx3-site-IV
mTH-Pitx3-site-V mTH-Pitx3-site-VI CBS Cnc/Maf-S-idealized B29-EBF-site-1
B29-EBF-site-2 B29-EBF-site-3 SSU5B-B2b-I SSU5B-B2b-II STAT5-3beta-HD STAT5-alpha-S1_casein
ALS-GAS1 STAT5-Bcl-XL STAT5-Bcl-XL-2 STAT5-beta-casein STAT5-CIS1 STAT5-CIS2
STAT5-CIS3 STAT5-CIS4 STAT5-cyclin-D1 CYP2C12-GHRE1 CYP2C12-GHRE2 STAT5-CYP-GHRE
STAT5-H6-STAT STAT5-ins-GLE STAT5-IL2R-mGASI STAT5-IL2R-mGASII STAT5-IL2R-GASd
STAT5-IL2R-GASp STAT5-Ig-J-GAS STAT5-LT-GASL1 STAT5-OSM-prox-GAS STAT5-OSM-M-STAT
STAT5-perforin-pSTAT STAT5-prl-GLE STAT5-SPI-GLE1 STAT5-SPI-GLE2 STAT5-TCR-gamma-stat-1
STAT5-TCR-gamma-stat-2 STAT5-TCR-gamma-stat-3 c-myc-GAS-like-RE IFN-gamma-STAT-RE
IRF-1-SBE ACT-A ACT-B alpha2-macroglobulin-APRE STAT3-angiotensinogin
c-fos-SIE_(2) STAT3-c-myc STAT3-delta-APRE STAT3-delta-IV-site STAT3-CRP-APRE
STAT3-CYP19-GAS STAT3-gamma-fibrinogen-II STAT3-gamma-fibrinogen-III gp130-SBE_(2)
junB-JRE-IL6 junB-APRF-element LBP-STAT3-RE Lyb-A/E-delta-GAS STAT3-P21-SIE1
perforin-PSTAT SOCS-3-STAT-element SPI-3-APRF/STAT-element STAT3-SBE TIMP-1-STAT-RE
VIP-CyRE bcl-x-GAS CAEV-GAS CD40-mGAS CD86-GAS3 CD86-GAS4 CIITA-pGAS Fc-lambdaR1-GRR
GBP-1-GAS HLA-E-5'-IRR HLA-E-3'-IRR ICAM-1-pIlambdaRE ICAM-1-GAS-2787 INDO-PEII
INOS-GAS IRF-1-GAS IRF-1-GAS-2 MCP-1-GAS MIG-proximal-GAS MIG-distal-GAS
TAP-1-GAS PU.1-M-CSF G/HBF-1-H-box-III m-PCE-1 m-OTX b-PCE-1-up b-PCE-1-int
PSTI-Region-IV-core mEpo-3'-DR2 hEpo-3'-DR2 RARE-DR5 kB-I rkappa-kE1
r-kappa-kE2 BCF1-uE4 BCF1-uE5 RTBV-BoxII CR2-CS CR3_CS CR1_CS NHE-COUP-RE
AP-1-beta-APP-distal USF-beta-APP-proximal NF-1-5HT3R Eos-TCR-alpha Eos-NF-kB
Eos-CD3-delta PAUSE-1 PAUSE-1_CS1 PAUSE-1_CS2 PAUSE-1_CS3 NRF2/GABP-ATP-syn-beta
Sp1-ATP-syn-beta osteocalcin-VDRE-2 24-hydroxylase-VDRE hTERT-downstream-E-box
hRIPE3b mRIPE3b rRIPE3b ROR/RZR_consensus Rev-erb-alpha-CS HAND2/E12_CS
GCS1-EpRE m4-mAChR-NRSE DEC1-HRE2 DEC2-HRE DEC2-HRE2 AP-2-delta-optimized-site
MyoD_CS Myogenin_CS2 E47_CS E47-MyoD_CS E12-MyoD_CS E-myogenin_CS E-box-#5
E-box-aa E-box-#6 mDRE1 GRF-FTZF1-RE UT-A-TonE TonEBP-CS hsp70-2-TonEA
hsp70-2-TonEB hsp70-2-TonEC hsp70-2-TonED CYP4A6-proximal-PPRE MHR3-EcRE1
MHR3-EcRE2 MHR3-EcRE3 MHR3-EcRE4 MHR3-MRE PSA_ARE Slp-ARE-1 Slp-ARE-3
hAR-ARE1 PU.1-c-fes PU.1-Fclambda-RI Stat5a-CS Stat5b-CS alpha-MHC-T3RE
S14-FUR-T3RE-1 S14-FUR-T3RE-2 S14-FUR-T3RE-3 T4-wild-type-DR4 Renin-RP-2
mEpo-HRE DEC1-HRE alpha2(I)-collagen-FP2 alpha2(I)-collagen-FP1 MTIIA-MREa
IGFBP-1-IRS-core Tto1-LTR4 Pv-PAL2P H-box PAL2-AC-I rODC-box-1 rODC-box-2
Fli-1-CS Fli-1-PuB2-m-2 CYP7A1-CDP-site-1 CYP7A1-CDP-site-2 CYP7A1-CDP-Site-3
CYP7A1-CDP-site-4 Cbfa-site-1 Cbfa-site-2 Cbfa-site-3 Cbfa-site-4 DexRE-1
DexRE-2 CYP3A23-Site-A SNOG_element_CS U3B-consensus GST-GPEI-core ARE_CS
ESE-3_CS alpha2-MCM1_CS NF-1-alpha2(I) alpha2(I)-undefined-site Ii-kappa-B-2
JCV-Pnt2 delta-EF1-SDRE delta-EF1-NRE AP-1-JCV ks1-dfd-1 FVa-SFFVp FVb2-SFFVp
FVc-SFFVp Sp1-SFFVp PEBP/CBF-SFFVp TXS-NFE2/AP-1-site ESE-1-NOS2 ESE-2-PSP
HIV-2_pets ACC-alpha-SRE-1 ACC-alpha-T3RE Egr-1-TNF-alpha TNF-alpha-CRE
TNF-alpha-kB1 TNF-alpha-kB2 TNF-alpha-kB3 Sp1/Egr-1-TNF-alpha PIS1-MCE1
PIS1-MCE2 Adf-1-Adh-P-2 Pax-Pax5-E1 POU-Pax5-E1 HOX/PBX-site Hox/PBX-site-2
U-prosaposin TH-dyad TH-Oct/Heptamer rITF2-Pan eve-2-MSE-GTTT4 Fkh-site
HNF-3-HNF-3-beta FKS2-CDRE NF-kB-Nos2 WT1-Cyclin-E-site-1 WT1-Cyclin-E-site-2
WT1-Cyclin-E-site-3 YY1-GATA-3 GATA-3-E-box Herp-ERSE-II Herp-ERSE Blk-BSAP-site
CD19-BSAP-site J-chain-BSAP-site GSTP1-R1 GSTP1-C1 NF-1-JCV-site-D NF-1-JCV-site-E
NF-1-GFAP NF-1-PLP NF-1-S100-beta-1 NF-1-S100-beta-2 NF-1-mNF-L NF-1-hPROENK
MEBA-MBP rLHalpha-GnRH-RE rLHbeta-GnRH-RE hLH-alpha-GnRH-RE mLHalpha-GnRH-RE
ATF/CREB-E-alpha TCF/LEF-E-alpha CBF/Ets-E-alpha AP-1-beta4-integrin Ets-beta4-integrin
Sox10-myelin-P0 HNF-4-factor-XI LMP-1-ets-site SOX9-S9WT SOX9-CDL2C2 SOX9-CD3-epsilon
Sox17-RS SRY-CS CNP-A GAGA3-V1bR GAGA5-V1bR ANT2-silencer-element
ANT2-silencer-core ANT2-Go2 ANT2-Go1 IL-12-GA-12 NF-kB-IL-12 C/EBP-IL-12
IL-4-MARE IL4-P0/P1 IL-4-octamer Tax/CREB_CS Tax/CREB-JC RBPJkappa-palI
RBPJkappa-PalII RBPJkappa-M3 RBPJkappa-Cp RBPJkappa-Hes RBPJkappa-LMP RBPJkappa-pIX
hTERT-ERE HTLV-NFOC-DR glide/gcm_CS GBS-E GBS-D GBS-C GBS-B
GBS-A IA-1_CS c-Abl_CS Reverb-alpha-Rd Rev-DR2 IA-1-Pax6 IA-1-NeuroD/beta2
IA-1-IA-1 Pax-8-WT1 Pax-8-thyroperoxidase TXS-nfe2-3 TXS-nfe2-2 B29-TOAD
B29-FROG HFH-2_CS1 HFH-2_CS2 HFH-2_CS3 HNF-3_CS2 SSA1-HSE2 MITF-MMCP-6
C/EBP-HBV-UE C/EBP-HBV-EnI C/EBP-HBV-EnII-1 C/EBP-HBV-EnII-2 C/EBP_CS3
KTF-1_RS Stat-5-cyclin-D2 beta5-integrin-FP1 beta5-integrin-FP2 beta5-integrin-FP3
beta5-integrin-FP4 ApoD-SRE1 ApoD-SRE2 ApoD-APP UREF-PCNA CFDD-PCNA NTF-1_CS
escargot_CS PCNA-DRE N-CAM-HBS-I RVR_RS mTf-SE2-E-box vgf-E-box vgf-CRE
vgf-CCAAT GATA-double-GATA osteopontin-6PORE FoxA1-Fox-site Tbx1-Fox-site
NIP-consensus IL-3-NIP C/EBP-delta_CS mTRP-1_M_box Mi-MB2 M-box_MB3 M-box-T>A
M-box-A>T hTyros-TDE hTyros-TDE-m1 hTyros-TDE-m2 hTyros-InrE mTyros_InrE
Ets-2-BRCA1 tau-FOOT Sp1-tau AP-2-tau NERD1-A9WT NERD1-C35 NERD1-C9 C50
AP-1-WDSV WDSV-5bp-repeats Sox10-P0-Site-A Sox10-P0-Site-B Sox10-P0-Site-C
Sox10-P0-Site-D Sox10-P0-Site-E Sox10-P0-Site-F NFLC-CRE Foxa-Foxa2 Foxa-Foxa2-2
PREF-1 Lp1 Ucp-2 WT-1-FREAC-4 TPO-B1 COXIV-Ets-site VDR-Z1
VDR-Z2 Gfi-1_CS Gfi-1-R21 HCMV-Gfi-1-site-1 HCMV-Gfi-1-site-2 rQR-ARE
hQR-ARE rGST-P_ARE Scratch-RS MyoD-mSlug MyoD-hSlug MyoD-hCalpain-6 osmY-CRP_site
osmY-IHF_site Lrp-osmY-site-1 Lrp-osmY-site-2 CRP_consensus IHF_consensus
Lrp_consensus Oct-C1_CS Fli-1-Ets-site-1 Fli-1-Ets-site-2 Col2alpha1-E-box-4
hGH-F14.3.1 hGH-F14.3.4 hGH-F14.1.3 chromogranin-B-core-element HIV-T3RE_(2)
apoA-I-DRE_(2) hPRL-Pitx-B1 hPRL-Pitx-B2 POMC-CE3 glucagon-G1-51 Pax-6-glucagon
glucagon-Maf-site c-myc-NHE-G Nrf2-GST-P1-site-1 Nrf2-GST-P1-site-2 Nrf2-GST-P1-site-3
AR-GST-P1-site-1 AR-GST-P1-site-2 AR-GST-P1-site-3 AR-GST-P1-site-4 AR-GST-P1-site-5
AR-GST-P1-site-6 AR-GST-P1-site-7 WIN-SAAB5-12 WIN-SAAB5-1C WIN-SAAB5-13C
9kVDRE LRE(AA) mOG2-cis-element Runx_consensus LEF1_CS Max/Max_CS c-Myc/Max_CS
USF/USF_CS ARNT/ARNT_CS ALAS2-GATA-A ALAS2-GATA-B ALAS2-CAC-A ALAS2-CAC-B
MCK-L MCK-R muscle-specific-E-box-CS AgammaCCAAT/DR mouse-beta-H1
epsilon-2DR epsilon-CCAAT/DR epsilon-5'DR mouse-epsilon-Y psi-DR-1 Agamma-117-HPFH
Agamma-107/8 ZmABI4_RS mABI4-1 mABI4-4 ABI4-Rab28 ABI4-HVA1 ABI4-HVA22
ABI4-Rab17 ABI4-Rab16B ABI4-CdeT27 ABI4-AtABI4 ABI4-OsABI4 rQR-ARE_(2)
Adh2-F HPV-16-E2-site-4 HPV-16-E2-site-3 HPV-16-E2-site-2 HPV-16-E2-site-1
PBREM-NR1 PBREM-NR2 globin-HS2-NFE2-motif Foxp1_CS HIV-1-E-box/ets_element
8DR-T3RE TRvalpha2-68DR TR-valpha2-8IP FREAC_core_motif FoxA2-Fox-site
osteopontin-RE-1a-1 osteopontin-RE-1b-4 Elk_CS1 Erg_CS1 Spi1_CS1 Spi1_CS2
hAR-IVSARE AP-1-like-GnRHH Tg-K Tg-A Tg-C GST-pi-RARE-1 GST-pi-RARE-2
GST-pi-RARE-3 EWG_RS FoxA2-cdx-2 SM-alpha-actin-cis-element lama3-Ebox3
G6Pase_IRS_1 G6Pase_IRS_3 OxyR-ORE Sp1-hTAFII55 AP-2-hTAFII55 hTAFII55-initiator
TAFII55-DPE DPE_CS Genesis_CS Genesis-site-3 Genesis-site-4 Genesis-site-5
Genesis-site-7 Genesis-site-12 Genesis-E2 Genesis-TTR Genesis-site-25 core-promoter-motif-1
core-promoter-DRE-motif core-promoter-TATA-motif core-promoter-INR-motif
core-promoter-motif-5 core-promoter-motif-6 core-promoter-motif-8 core-promoter-DPE-motif
core-promoter-motif-10 CD4-P2-site CD4-P3-site CD4-P1-site IGFBP-5-M1 IGFBP-5-M2
Xbra2-CACCT-site Nil-2a-IL-2 Bra_RS AREB6-IL-2 MCK-E2_box Osteopontin-Hox-site
neuronal_silencer_CS hDBH-element-I hDBH-silencer-element-2 DBH-HS-I DBH-TATA
N-CAM/PBS hKDR/flk-1-Inr mKDR/flk-1-Inr Ddc-Z1-site-1 Ddc-Z1-site-2 Ddc-Z1-site-3
Ddc-Z1-site-4 Ddc-Z2-site-1 Ddc-Z2-site-2 Ddc-Z2-site-3 Ddc-Z2-site-4 Ddc-Z2-site-5
Ddc-Z3-site-1 Ddc-Z3-site-2 Ddc-Z3-site-3 Ddc-Z4-site-1 Ddc-Z4-site-2 Ddc-Z4-site-3
Ddc-Z4-site-4 Ddc-Z4-site-5 gsc-DE-D29 gsc-DE-D17 TRAC-CRP-site TRAC_CS
Six4-ARECS Six4_CS Trex/MEF3_composite_CS Six5_CS Six5-IGFBP5 IRS-CS_(x)
IL4-P0-element Pit-1-GH-site-A Pit-1-GH-site-B Pit-1-GH-site-C C4B-F3
duodenal-enhancer-CS ADA-FP-1 ADA-FP-2 ADA-FP-3-a ADA-FP-3-b ADA-FP-4 ADA-FP-5
ESRRA23 PXR-UGT1A1 NR1-UGT1A1 UGT1A1-XRE Slug/Snail-aromatase aromatase-CREaro
Rev-ErbAalpha_CS glucagon-G1-56 C/EBP-gamma-IL-6 C/EBP-optimal H3.2-YY1
AP-2-H3.2 H3.2-X-site RTBV-Box-II beta-globin-CACCC-box-CS Oct-C4_RS mGATA-1-HS1-GATA-E-box
hGATA-1-GATA-E-box s-GC-box p35-GC-box Sp1-idealized Nkx-2.5_CS Nkx-2.2_CS
osteopontin-RAE Fnr_CS NarL/NarP_CS2 aldolase-C-28bp-element aldolase-C-box-C-site
aldolase-C-site-824 aldolase-C-site-524 kappaE-3prime-enhancer-WT kappaE3-Oligo-7
Dbp-Ebox-1 Dbp-Ebox-2 Dbp-Ebox-3 Dbp-Ebox-4 PAR/bZIP_CS HIF-1_CS Fkh-kruppel
Fkh-TTR Fkh-CRYSTAL Fkh-TTR-weak Fkh-EH-WT laminin-B2-PEA3/EBS-element
collagenase-IV-PEA3/EBS-elemen hCD4-PEA3/EBS-element mCD4-PEA3/EBS-element
COXVb-Inr-PEA3/EBS-element COXIV-Inr-PEA3/EBS-element Ad2-ML-Inr Finb/RREB-1-Secretin
Finb/RREB-1-Calcitonin Finb/RREB-1-c-erbB2 RREB-1-CS BETA2/NeuroD-Secretin
Secretin-GCI Secretin-GCII E2F1-cyclin-D3 CD18-HRE TOR-DR-5 TOR-DR-6 TOR-DR-4/T
RARE-1A RARE-1C RARE-1G RARE-1T RARE-5G RARE-5T RARE-6C RARE-6G
RARE-6T RARE-7A RARE-7G RARE-7T RARE-3G RARE-5A mHoxb5-Dr5-RARE hHoxb5-Dr5-RARE
zHoxb5-Dr5-RARE SXR-DR-4 SXR-IR-4 CYP3A4-inducible-element DR5-RARE hRARalpha2-RARE
mRARbeta2-RARE hRARbeta2-RARE hRARgamma2-RARE hADH3-RARE mLB1-RARE mCRABPII-RARE1
mCRABPII-RARE2 HIF-1-iNOS Pax-5-H2A-2.2 Pax-5-H2B-2.2 Pax-5-H2B-2.1 Pax-5-CD19-1
Pax-5-Iepsilon Pax-5-alphaS-1 Pax-5-Sgamma1 Pax-5-CD19-2-A-ins Pax-5-CD19-2
Pax-5-H2A-2.1 Pax-5-5'Sgamma2a Pax-5-PRS-5 Pax-5-e5 Pax-5-H2A/e5 Pax-5-H2A-17C
Spi-1-SV40 Spi-1-EIAV Spi-1-Igkappa Spi-1-Iglambda-2-4 Spi-1-Ig-Vkappa19
Spi-1-M-CSF-receptor Spi-1-FclambdaRI Spi-1-FclambdaRIIIA Spi-1-IL-4 Spi-1-Ig-J-chain
Spi-1-scavenger-receptor Spi-1-CD11b Spi-1/Spi-B-c-fes COL1A1-FP1 MCREF-1-MSV-1
Rox/Max_CS JE-element TM-DR4-RARE alpha2(I)-FPI alpha2(I)-FPII alpha2(I)-FPIII
TRE-DR5 HIF-1-Noxa Myb-CD13/APN Tcf_CS Tcf-4-osteopontin Ctpct-region-A
Ctpct-region-B Ctpct-region-C HOX-PBX_CS PU-ets-TFEC-5 REBOX Mt1
Mt3 Mt4 hPGCG-G1 hPGCG-G2 hPGCG-G3 rPGCG-G4 hPGCG-G4 EF-1alpha-EFP1
EF-1alpha-EFP2 HoxTF-Hoxb-4 HIF-1-hLeptin m-apoAI-RORE CD13/APN-Etc-C GST-Yalpha-AHRE
GST-Yalpha-ARE/EpRE M-CSF-receptor-site-A dSIM/ARNT_CS mVEGF-HRE hSIE-m67
MGFe HoxTF_CS Ets-2-boIFNT1 ovIFNT-p7 C/EBP-FLAP-proximal C/EBP-FLAP-distal
Arp14D-element-I-site DBH-OLI-D albumin-DEIV junB-IL6RE PAX2-WT1-Site-I
PAX2-WT1-Site-II PAX2-WT1-Site-III B29-BCS Sp1-B29 Ets-B29-1 Ets-B29-2
Ikaros-B29 HDBP_CS M-CSF-receptor-site-B M-CSF-receptor-site-C PU.1-M-CSF-receptor
M-CSF-FIRE-site-1 M-CSF-receptor-site-Z LBF4-LMP1 WT1-EGFR-1 TTF-1-SP-B
Sp1-SP-B-1 Sp1-SP-B-2 HNF-3-SP-B GAGATA-PSA3.1 MRF4-AT_site Ldha-HRE ENO1-HRE
EPO-1-HRE hVEGF-HRE ALDA-HRE PGK1-HRE CDP-dNRE-1 CDP-dNRE-2 CDP-dNRE-3
CDP-dNRE-4 CDP-dNRE-5 HIF-1-TfHBS mFlt-1-HIE hFlt-1-HIE cycD2-E3-E-box
cycD2-E4-E-box Azf1_RS Cbf1_CS Cin5_RS Fkh1_CS Fkh2_RS Gln3-GLN1-162-UASNTR
CuRE_CS Pdr1_RS Pdr3_RS Rap1-telomeric-site Aft1_CS Reb1_RS Rim101_RS
Rph1_RS1 PACE_element Rtg1/Rtg3_CS Skn7_CS Stb5_CS Sum1_CS DAN1-DRE1
Uga3_CS Ume6_CS Yox1_CS ZRE_CS Gfi-1_CS2 Gfi-1-ELA2-8 Gfi-1-ELA2-9
Gfi-1-AZU-1 Gfi-1-AZU-2 Gfi-1-AZU-4 Gfi-1-AAT Gfi-1-AAT-2 Gfi-1-ACT Gfi-1-ACT-2
Gfi-1-ACT-3 Gfi-1-Jak3 Gfi-1-C/EBP-alpha Gfi-1-C/EBP-alpha-2 Gfi-1-C/EBP-epsilon
Gfi-1-E2F5 Gfi-1-IL2-1 Gfi-1-IL2-4 Gfi-1-IL6R-2 Gfi-1-IL6R-3 Gfi-1-IL8-2
Gfi-1-IL8-3 Gfi-1-Gfi-1b Gfi-1-E2F6 Gfi-1-Ets2-1 Gfi-1-Ets2-3 Gfi-1-c-Myc
Gfi-1-c-Myc-2 Gfi-1-c-Myc-3 Gfi-1-c-Myc-5 Gfi-1-c-Myc-6 Gfi-1-P21 Gfi-1-P21-2
Gfi-1-Gfi-1 Sp1_CS-X Sp1-CS-Y Sp1-c-kit Azf1-CLN3 c-CaD-SRE HIF-1-guanylin
Xbp1-CLN1-1 Xbp1-CLN1-2 Xbp1-CLN3 Xbp1-CYS3 insulin-Za-element AR1
AR2 AR1-CS2 AR1-CS3 AR2-CS2 Mot3-his4-912-A Mot3-his4-912-B Mot3-his4-912-C
Mot3-his4-912-D Rox1-PIS1 Nrg1-UAS1-1-A Nrg1-UAS1-1-B Hac1-UPRE Stp2-BAP3
Abf1_CS Dal82-Dal4-RD7 Dal82-Dal4-RD8 Dal82-DAL7-1 Dal82-DAL7-2 HAP1_CS1
HAP1_CS2 HAP1_CS3 Yox1-MCM3 Ndt80_CS BlaI_CS CytR-half-site-L RafR_CS
cpxR-P_CS mngR-RS1 gcvA-gcvTHP glpR_consensus icrR_CS modE-moa nagC_half-site_CS
pdhR-pdhR TerB tyrR_CS tpl-box-C WT1-Bcl-2-1 WT1-Bcl-2-2 Bas1-ADE5/7-1
Bas1-ADE5/7-2 Bas2-ADE5/7-1 Bas2-ADE5/7-2 nreb-F170/L nreb-F130/U CLN3-DDE1
Aft2-FET3 SIP4-CSRE FacB-class-B-CS1 FacB-class-B-CS2 Gln3-Dal3-1-UASNTR
fruA-DS CCR-palindrome-CS ToxT_RS ILV1REB1A/B SIN3REB1 Reb1-Reb1-A-site
Reb1-Reb1-B-site Reb1-Reb1-C-site atZAP1_CS erpAB-site-1 erpAB-site-2 sigma-54-CS2
sigma-28-CS2 Ylr266_CS DRE_CS CytR-half-site-R Ag-MADS-domain-CS Flc-SOC1
CYP24-VDRE-1 CYP24-VDRE-2 CYP24-EBS mngR-RS2 rhaS-rhaBAD-1 rhaS-rhaBAD-2
rhaS-rhaT-1 rhaS-rhaT-2 rhaR-rhaSR-1 rhaR-rhaSR-2 HpaR-OPR1 HpaR-OPR2 HucR_RS
melAB-site-2 melAB-site-2' Fnr-pmelR IAP-LTR81C-site MBox TyrpI-Ebox
TYRO-Ebox Yap1-RS Yap2_CA SPRR1B-EBS/GC Ets-2-CD13/APN ceh24-NdE-box
HIF-1-LDH HIF-1-PGK mper1-proximal-Ebox mper1-middle-Ebox mper1-distal-Ebox
Hoxa-1-RAIDR5-CE2 Rev-DR2-CS Brinker_CS megakaryocyte-enhancer-CS Sp1-EDA-1
Sp1-EDA-2 EDA-enhancer PDRE_CS PDR5-PDRE-site-1 Pdr5-PDRE-site-2 Pdr5-PDRE-site-3
TraA-RS CR_CS Emu-site-C2 Emu-site-C5 Emu-site-C6 IFNA-DNRE AlgR1_CS
ArgR_CS OmpR-OmpF-F1 SinR_CS xyl-IA2 deoR-RS ada-UP-element ARG_box_CS
cynR-RS CysB-hslJ-1 fadR_CS fhlA_CS Fis_CS pts-FruR-box Fur_CS hipB_CS
ilvYC-O1 lrp-gltBDF metR_CS narL_CS OxyR-dsbG soxS_CS torR_CS CorR-cfl
perA_CS OmpR-OmpF-F2 OmpR-OmpF-F3 DnrI_CS Hpr_CS Ets-FREAC-4-1 Ets-FREAC-4-2
Ets-FREAC-4-3 PrfA_box fadR-fabB Orf10-RS cynR_CS cbaA-siteI cbaA-site-II
alphaA-CE2-T-MARE PRL3 CARP-108 PSA-ARE-VI PSA-ARE-V PSA-ARE-IV PSA-ARE-III
PSA-ARE-IIIA PSA-ARE-IIIB Pax6-c-maf-A Pax6-c-maf-E Pax6-c-maf-F c-Maf-MARE-1
c-Maf-MARE-2 tir-Ler-activation_site tir-ammonium-dependent-site tir-negative-element
C13-RARE A24-RARE NodD_CS NodD_CS2 AP-2-H-PGDS CysB-hslJ-2 torR-tor-operon-box-3
ilvC-O2 P-LAP-FP4 P-LAP-FP3 P-LAP-FP2 P-LAP-FP1 Mlc-malT PerA-perA PerA-bfpA
PerA_CS aidB-UP-element xyl-IA1 xyl-IF1 xyl-IF2 CFTR-102A COL4A6-US
RBP-IL-6 Lmo2-E-box-2 ModE_CS LexA_CS3 PurBox BCL6_CS X-MyT1_CS p53-E2FBP1/DRIL1
Ncx_CS NMP-2_CS OCFRE Myb305-CHI PF4-TME Dof3_CS GLUT2-site-F GLUT2-site-G
GLUT2-site-H Cas-BR-E-CG5 GLUT2-site-C-1 Th1/E47_CS Ash1p-site-1 Ash1p-site-2
Ash1p-site-3 Ash1p-site-4 Ash1p-site-5 Ash1p-site-6 rTSHbeta-nT3RE DBH-domain-I
DBH-domain-II DBH-domain-III VEGF-HRE-1 VEGF-HRE-2 Barx2-Bx55(HBS1) Barx2-Bx75(HBS1)
Barx2-Bx55(HBS2) Barx2-Bx75(HBS2) Barx2-Bx98(HBS1) Barx2-Bx23(Alu) Barx2-Bx68(HBS1)
Barx2-Bx81(HBS1) Barx2-Bx103(HBS1) p53-M-PGAM p53-MCK p53-RGC-2 Mef2-E1
PEPCK-RARE2 L1-HPD Ng-CAM_HBS RANKL-HSE ssT1-Timp-1 ssT1_CS ssT1-Timp-1-ds
HIF-1-hexokinase Math3-E-box Math3-N-box YY1-rpl32 YY1-rpl30 YY1-serum-amyloid-A1
YY1-delta-globin YY1-Ig-kappa3'-enhancer YY1-RSV-TSSC L-PGDS-E-box L-PGDS-N-box
Ncx-US Ncx-RARE NNbetaRARE NN7-29 NN7-51-1 NN7-51-2 NN7-71 NN7-87-1
NN7-91 NN8-3 NN8-4 NN8-29 NN8-39 NN8-44 NN8-49 NN8-66
Hmx-3_CS Ren-CNRE DR4/LXRE E2F-Cdc6 EKLF-GEG c-Kit-Mi-element Zfh-1_RS
hNET-NI Qrx-Ret-1 Qrx-BAT-1 KLF5-Dbeta-1 CystatinE-CNRE RP21-425-CNRE
RP23-157O10-CNRE HYPk-CNRE-1 HYPk-CNRE-2 S100A9-CNRE Psx-1-CNRE Fbln-2-CNRE
Scmh-1-CNRE NET-7-CNRE ACEII-cbh1 CreA-prn vnd/NK-2_CS vnd/NK-2-optimal-site
LexA_CS4 LexA_CS5 LexA_CS6 LexA_CS7 LexA_CS8 LexA-lexA LexA-recA LexA-uvrA
LexA-ssb LexA-ruvAB Ren-2-proximal-site AML1-Vbeta-8.1 TTF-1-AoGen-643
TTF-1-AoGen-446 TTF-1-AoGen-125 TTF-1-AoGen-14 TASS-1 Ren-1c-CRE Barx-2_CS
SRY/Sox_CS MecI-Mec Tox-Box_CS HAC1-UPRE tinman-E1,2 tinman-E3 AP-2-alpha-BTE
AP2-alpha-A32 E2F-B-myb B-Myb-DRS CCNA-CDE/CHR CDC2-CDE/CHR CDC25C-CDE/CHR
NF1-MBP MITF-MMCP-6-1 MITF-MMCP-6-2 POMC-SIE POMC-NurRE GATA-1-GP6 Shh-SBRN3
Brn3b_CS HNF-1-ngn3 ngn3-H3-2 HES1-ngn3-N1 HES1-ngn3-N2 HES1-ngn3-N3 HES1-ngn3-N4
EcF-cyclin-E OxyR-ahpC-P1 OxyR-fhuF-2 OxyR-fhuF-1 OxyR-yfdI TTF-1-site-C
MSE-S aromatase-3CRE aromatase-XCRE SF1-aromatase Sp1-KDR/flk-1-I Sp1-KDR/flk-1-II
Sp1-KDR/flk-1-III Sp1-KDR/flk-1-IV Ngn3-Pax4 HNF1-Pax4 hCS-1-site-II hGH-T3RE
rGH-T3RE-1 rGH-T3RE-2 rGH-T3RE-3 rGH-site-I TOXE-TOXA/HTS1 RISBZ1-GluB-1
O2-CS conRTRE M3-RTRE DR1-RTRE P0-RTRE 1/2-RTRE P2-RTRE hCorin-GATA
mCorin-GATA syndecan-FIRE-motif-5 syndecan-FIRE-motif-4 syndecan-FIRE-motif-3
syndecan-FIRE-motif-2 syndecan-FIRE-motif-1 mHoxD12-RXI cHoxD12-RXI zHoxD12-RXI
xlnB-C4/C3 xlnB-C2/C1 Nmp4-COL1A1-site-A Nmp4-COL1A1-site-B pdx1-Ph1-site-1
pdx1-PH1-site-II pdx-1-PH2-site-I PB-ARE2 Bapx1-B7 BS5-B-core ED7-D-core
HPR1-Sp1-A HPR1-Sp1-B HPR1-Sp1-C HPR1-ERE-C/D HPR1-ERE-B HPR1-ERE-A c-fes-FP1
c-fes-FP2 c-fes-FP3 c-fes-FP4 c-fes-FP4-3' pSP-A2-TBE1 bSP-A1-TBE2 bSP-A2-TBE2
alpha1a-AR-HRE Nkx-6.1-Nkx6.1 FadR_CS FadR-fadB LAMC1-bcn-1 V2R-CSE1 lacI_CS
NarL/NarP-napF CLN3-DDE2 CLN3-DDE3 CLN3-DDE4 RORE PHEX-GRE Hd-ZIP-I/II_CS
HD-Zip-III_CS claudin-18a-probe-I claudin-18a1-probe-II CYP3A2-DR3-PXRE
CYP3A2-DR3-PXRE-2 CYP3A4-DR3-PXRE CYP2A2.3-ER6-PXRE CYP3A5-E6-PXRE CYP3A6-ER6-PXRE
CYP3A7-ER6-PXRE MDR1-ER6-PXRE CYP2B1-DR4-PXRE CYP2B6-DR4-PXRE CYP2B6-DR4-PXRE-2
CYP2C9-DR4-PXRE MDR1-DR4-PXRE MRP2-ER8-PXRE CD4-S1 CD4-S3 CD4-S2
aldolaseA-MEF3-site myogenin-MEF3-site Right-MCK-E-box Ins-1-E-box Da-E-box
Scleraxis-E-box EPOHBS TfHBS Rap1p-strict-CS BEN-EFG-B8 Pax5-mhb-E2
Pax5-mhb-E1 AML1-IMPDH M-CAT-A CBF1-rRen CBF1-mRen CBF1-hRen Ets-1-rRenin
hEPCR-Region-I hEPCR-Region-II hEPCR-Region-III hEPCR-Region-IIIa hEPCR-Region-IV
hEPCR-Region-V Pbx1:Hox_RS Pbx1:Meis1_RS HNF-1-UGT2B17 UGT2B-PSE slowpoke-C0-block-1
slowpoke-C0-block-1-hyd slowpoke-C0-block-4 slowpoke-C0-block-4-hyd slowpoke-C0-block-8
slowpoke-C0-block-8-hyd slowpoke-C0-block-9 slowpoke-C0-block-9-hyd slowpoke-C0-block-10
slowpoke-C0-block-10-hyd slowpoke-C0-block-27 slowpoke-C0-block-27-hyd
ASK-E2F-site LE-ACS-G-box osteopontin-OPSrcRE FAC1-APP-1 FAC1-APP-2 FAC1-PS-1
FAC1-PS1-2 FAC1-D2-R-1 FAC1-D2-R-2 FAC1-SOD1-1 FAC1-SOD1-2 CHOP10/CEBP-beta_CS
p20K-QRU p20K-region-A Sp1-cyclin-D2 p68-89 p68-E p68-E2FB ANT_CS
hprA-cytokinin-inducible-site hprA-TGACG-motif DSCKX1-cytokinin-inducible-1
DSCKX1-cytokinin-inducible-2 Hoxb1-PBX-HOX-site Hoxb1-PBX-MEIS-site Lab/Exd_CS
Arp14D-element-I zGATA-GATA-double-motif zGATA-1-DE168-29bp-element COL9A1-SOX/Sry-D-site
COL9A1-SOX/Sry-E-site Sp1-VEGF tal-RE tal-RE_CS CPS-I-site-III CPS-I-site-II
CPS-I-site-I CPS-I-GAG-element P450scc-SCC2 P450scc-SCC1 AP-2-p450scc RANTES-site-A
c-Fms-site-A Aml-1-c-Fms Ets/Sp1/AML1-c-Fms RTEF-1-VEGF beta-enolase-BEE
NR(I)-ast-I NR(I)-ast-II NR(I)-ast-III CD155-FPIII CytR_CS MalI_CS RafR_CS2
RbtR_CS ScrR_CS fruAB-CRE-W fruAB-CRE-S Tet-O1 marO-site-I phoB-phoB
FoxL2-StAR FoxL2-StAR-2 FoxL2-StAR-3 HIV-NRRE-1 hMCAD-NRRE-1 mMCAD-NRRE-1
CRP-IL-6-responsive-site Glc-6-Pase-IRU ERELEE4-box ROS-responsive_element
flk1-HBE Cav3m2 Cav3m6 Sox2-POU-site-2 Sox2-POU-site-1 DRE-palindromic-sequence
HIF-1-hAldolase-A HIF-1-hVEGF HIF-1-hIGFBP-1 HIF-1-rIGFBP-1 HIF-1-mIGFBP-1
HIF-1-Heme-oxygenase HIF-1-rAFP-1 Mig1-SUC2-A Mig1-SUC2-B Mig1-GAL1-A Mig1-GAL1-C
APBP-1_CS APBP-1-Aggrecan-region-L Bcl-6-NF-kB1-1 Bcl-6-NF-kB1-2 Bcl-6-NF-kB1-3
CTS1-UAS-left CTS1-UAS-right flk-1-palindromic-GATA iclR-iclR iclR-aceBAK
SRF_CS MCM1_CS MEF2A_CS MafA-insulin-II-C1 NarL/NarP-hyb-site-1 NarL/NarP-hyb-site-2
NarL/NarP-hyb-site-3 ArcA-hyb ArcA-hya NarL/NarP-hya-site-1 NarL/NarP-site-2
myc-TBE2 uhpA-uhpT-S uhpa-uhpT-W MDR1-ER6/DR4(III) MDR1-DR4(II) MDR1-DR4(I)
GCC-box EGFREgrRE RFX_CS RFX4-IL5Ralpha alpha9-nAchR-Sox-site ZAS3-RS
Myc-GH1 eve-PTE MOK2-IRBP MOK2_CS KLF15-rhodopsin rhodopsin-bNRE FleQ-flhA
FleQ-fliE FleQ-fliL FleQ-fleSR rKL-1 hKL-1 Slp1-RS RORalpha_CS Pax-1_RS2
B6BS AREA hPPARalpha-FXRE GABAbR1b-MUC eve-173-site-2 eve-173-site-3
eve-173-site-4 Brachyury-eFGF-distal Brachyury-eFGF-proximal Brachyury-mFGF-4
Brachyury-hFGF-4 Brachyury-palindromic-RS marO-site-II CYP3A4-DR3-XREM
Gln3-GDH2-SITE3 ArgR-car-operator ArgR-argF ArgR-aruC-B1 ArgR-aruC-B2 pcbAB/C-BSII
pcbAB/C-BSIII rEGFR-NGF-responsive-element renin-silencer-element alphaPAL/NRF-1-FMR1
IRF-1/IRF-2-BLV-U5 TR2-DR1-site Nkx2.5-CAR3-SBE1 Nkx2.5-CAR3-SBE2 Nkx2.5-CAR3-SR3
IL-5-RE-II Optimedin-Opts2 Optimedin-OPTp Optimedin-OptS1 Six5_CS2 mIL-10-CCT
Pax3-MITF Sox10-MITF-site-B Sox10-MITF-Site-C/D hiNOS-NRE prolactin-BTE
GRE(HOXA10) GZF1_CS white(eve)-GAGA FlrC-flaAp RVR_CS HiNF-P_CS kappa-DRL
WT1-VDR CYP19-palindrome IL-8-NRE PLZF-site-A PLZF-site-B PLZF-IL-3R PLZF-random-site
GATA-Dbeta1 LexA_CS10 LexA_CS9 LexA_CS11 StAR-SRE-5 StAR-SRE-3 StAR-SRE-2
Sox9-Vanin SF-1-Vanin-site-1 SF-1-Vanin-site-2 HIV-1-NH E2A-Pip_site E47/Pip-uE4
c-Myb_CS5 c-Myb_CS6 cysK-CBS-K1 PTalpha-proximal-ERE PTalpha-distal-ERE
pstS-pho-box-1 pstS-pho-box-2 SP-A2-GT-box SP-A-MBS MOK2_CS2 cspA-DNA-site
SLD-12 Tbeta5-TCR-beta Oct-1-GnRH Nit2-niaD-niiA SOX9-CRTL1 HTLV-TRES2
NFAT-Lymphotactin-E1 StAR-SFB-1 StAR-SFB-2 StAR-SFB-3 StAR-SFB-4 StAR-SFB-5
Dri_CS ADA-FP1 ADA-FP2 ADA-FP3 lactogen-DF3 lactogen-DF4 ADA-NF2-ADA-APRC
ADA-HS-D-G1 ADA-HS-D-FP-2 ADA-HS-D-FP-3 Snail2-Ebox-2 AP-1-rANF ANF-NK2-site
PLOD1-Bic-NKE ANF-SRE/114 ANF-SRE/406 AFN-PERE GATA4-ANF APP-E3 APP-amyloid-CAGA
USF-ADAM10 apoE-ABEF1 SMalpha-actin-ATTA zen-VRR-AT2 GABP-HIV-1-variant
BKV-site-A BKV-site-B BKV-site-C BKV-site-F Pax6-alphaA-crystallin apoE-URE3
mAda-MSPE SURE1 AMYBOX1 AMYBOX2 PTF1-CS PTF1-mELA2 PTF1-rCPA-90 PTF1-rCPA-142
PTF1-rCtrb PTF1-mTrpd HNE-30bp-element Apo-hME.1/2 Apo-mME H3.3B-CRE/TRE
Nkx-2.2-Insulin-site-1 Pdx1_CS Pax-4-rInsIC2 COIN-1 Runx2-D1-HDRE Runx2-D2-HDRE
Runx2-D3-HDRE Rapsyn-Kaiso-box-1 Rapsyn-Kaiso-box-2 NF-kB-urokinase UF1-H3beta-HNF-3-2
UF1-H3beta-CS diodinase-JRE TR/RXR-deiodinase PHO_CS E2F-ATFa ATFa-IRE
p53-RAI3-BS1 p53-RAI3-BS2 p53-RAI3-BS3 dmU7-PSE-A dmU7-PSE-B CWM-T15-E-box
tsh-FP-site-1 tsh-FP-site-2 tsh-FP-site-3 tsh-FP-site-4 tPACRE pBS-MRE=s
rInsI-CEB rInsII-CEB hIns-CEB hCMV-negative-element YB-1-E2 GCSI glucagon-IS
glucagon-E3 glucagon-E2 VMD2-E-box-1 Haptoglobin-IL6RE CTCF-144-1 Pdx-1-CMV-IE
Pdx-1-CMV-IE-2 SAA-SAF-binding-element SP-d-NFAT-I TTF-1-SP-D Rpe65-1AP-4
Rpe65-2AP-4 Oct-1-Rpe65 HNF-6-HNF-4 HNF-1-HNF-4 HBP1-hCD2 HBP1-N-myc-1
HBP1-N-myc-2 HBP1-N-myc-3 ZnT1-MRE-a ZnT1-MRE-b hAPP-PRE hAPP-URE-93 lyn-Ets-site
NERF-CS adipsin-ORE HBVEnII-NRE NREBP/SON-CS GPEI LMP1-Jkappa LMP-1-ISRE
Rta_CS Fbx15-oct-site Sox2-Fbx15 beta-spectrin-site-1 beta-spectrin-site-2
beta-spectrin-site-3 hCAR-GRE NF-kB-RACK1 OMP-SIE AgammaSTAT C/EBP-mHpx
C/EBP-rHpx TR4RE-HBV TonEBP/OREBP-core-CS mLPH-mG1 hLPH-hG1 hLPH-hG2 araC-araI1
carP1-carAB-1 rpoD18CS U6-PSE U1-PSE U2-PSE renin-bc-element Ear2-motif
rInsulin-R3 PDX-1-rInsulin UL127-WH-site suHW-UL127 prodynorphin-DRE DRE-CS
HLA-A2-ISRE UCP1-41WT Dof1-OP1 OBP1-GST6 PPRE-CS aP2-PPRE PEPCK-PPRE ME-PPRE
hCIITA-pIRF Blimp-1_CS1 Blimp-1_CS2 Amy32b-O2S O2-zE19 GLM_motif hor2-GLM
FXRE_CS FTZF1-RE Tcf-T-1 Tcf-T-2 Tcf-Xbra-1 Tcf-Xbra-2 hH3/k-m4-CCAAT
hH3/k-m7-CCAAT hH3/k-m8-TATA hH3/m-m3-CCAAT hH3/m-m8-TATA hH3/k-proximal-CCAAT
hH3/k-distal-CCAAT epsilon-GSM CIITA-proximal-site LSF-TS LSF-TS-2 TS-28bpR
beta-MHC-repressor-site beta-MyHC-betaF1 beta-MyHC-C-rich-element beta-MyHC-3'-site
rAchR-epsilon-NRE mAchR-epsilon-NRE mAChR-delta-NRE mNT-3-NRE Snail1-Snail1
RBF1-RB TR2RE-SV40 CNTFR-DR1 NCAE-TR3 ADH-1-box-B UPRE chk-YB-2-RSV
mIRF-1-DPE hIRF-1-DPE rWAP-FP2 rWAP-FP1 HLA-F-ISRE HLA-G-ISRE pIRE/Myd
fibronectin-Feec1 ISG56-ISREII ISG56-ISREI RE1-hCACNA1A-site-A RE1-hCACNA1A-site-B
RE1-hCACNA1A-site-C RE1-hCACNA1A-site-D RE1-mCACNA1A-site-A RE1-mCACNA1A-site-B
RE1-mCACNA1A-site-C RE1-mCACNA1A-site-D cVIT-II-DBP-site Pit-1-RDE Ku86-XOR
XOR-E-box Fshr-site-7 Fshr-FP2 Fshr-FP3 Fshr-FP4 Fshr-FP5 TAT-11/2A TAT-11/2B
TAT-11/3 alphaA-crystallin-PE1B Fis-site-VI Fis-site-V Fis-site-IV Fis-site-III
Fis-site-II Fis-site-I IHF-Fis KIR2DL4-FP-A KIR2DL4-FP-B KIR2DL4-FP-C
KIR2DL4-FP-D KIR2DL4-FP-E KIR2DL4-FP-F KIR2DL4-FP-G KIR3DL1-FP-A KIR3DL1-FP-B
KIR3DL1-FP-C KIR3DL1-FP-D KIR3DL1-FP-E KIR3DL1-FP-F avenin-conserved-sequence
dicot-conserved-sequence GHRH-site-1 GHRH-site-2 GHRH-site-3 glucagon-G5
glucagon-G1-50 dpp-Bin-I dpp-Bin-II dpp-Bin-III H4-box-CS hH10-H4-box xH10-H4-box
Fur-fepB Fur-entS Fur-FFFF Fur-FFxRR LORE-element MAPB1B-neuronal-element
MN-PR5 MN-PR4 MN-PR3 MN-PR2 MN-PR1 TRAIL-ISRE insulin-A3 insulin-II-E1
carP1-carAB-2 so-CS soAE soEY MIZ-1b_CS MIZ-1c_CS Mad4-initiator
CEBPB-site-II CEBPB-site-I AP-1-4F2HC NF-4FC_RS NF-4FA-m4F2HC NF-4FB-m4F2HC
AP-1-m4F2HC GATA-1-calponin TTF-1-TSHR-upstream TTF-1-TSHR-downstream TTF-1-CaSR-C
TTF-1-CaSR-A TTF-1-CaSR-B TTF-1-CAM-III-A TTF-1-CAM-III-B TTF-1-E-CAD-A
TTF-1-CT/CGRP-C HNF-1-alpha-fibrinogen HNF-1-factor-VIII UIRR-GATA OE-1-II-1
OE-1-II-3 OE-1-II-4 SRF-Actn1 SRF-Actr3 SRF-Atp2a2 SRF-Cfl1 SRF-Cfl2 SRF-Coro1a
SRF-Dtn1 SRF-Efha1 SRF-Enah SRF-Enh SRF-Flnc SRF-Hspb7 SRF-Itga5 SRF-Itgb1bp2
SRF-Pln SRF-Sdc4 SRF-Tln SRF-Tnnc1 SRF-Trip6 SRF-Copeb SRF-Etv1 SRF-Flh1
SRF-Hoxc6 SRF-Lef1 SRF-Nfatc4 SRF-Nfyb SRF-Ring1 SRF-Tcfap2b SRF-Adm SRF-Ctgf
SRF-Dm15 SRF-Dusp6 SRF-Igf2 SRF-P2rx1 SRF-Rrad SRF-Bin1 SRF-Dnajb1 SRF-Car3
SRF-Urod SRF-D14Ertd231e SRF-Impact AKAP12alpha-CArG1Fr AKAP12alpha-CArG2Fr
CFTR-CArG-site SMHC-conserved-sequence SHMC-CArG*-likeII SHMC-CArG*-likeI
SHMC-FP-II SHMC-FpIII LTC4S-distal-CACCC CFDD-site-1 CFDD-site-2 CFDD-site-3
RORalpha-RevDR2 Galphai2-ARE NQO1-ARE mAFP1-22bp-intronic-site mAFP1-44bp-intronic-site
HNF4-insulin-HBE p53-mdm2_1 p53-mdm2_2 p53-bax p53-mmp2 p53-gdf15_1 p53-gdf15_2
p53-gtse1 p53-gml p53-scara3 p53-rrm2b p53-pmaip1 p53-tp53inp1 p53-tnfrsf10b
p53-p53aip1 p53-tp53i3 p53-bbc3 p53-tnfrsf6 p53-igfbp3 p53-sfn p53-MAP4K4-1
p53-MAP4K4-2 p53-MAP4K4-3 p53-BCL2L14/BCL-G p53-BBC3/PUMA p53-COL18A1-1
p53-COL18A1-2 p53-COL18A1-3 p53-COL18A1-4 claudin7-Ets-site Nkx-2.5-hdio2-1
Nkx-2.5-hdio2-2 Smad7-BRE-1-box-1 Smad7-BRE-1-box-2 Smad7-BRE-1-box-3 MBP-Fyn-response-element
TCR-betaE5 hTLR9-R1 hTLR9-R2 hTLR9-R3 hTLR9-R4 Nkx-6.1-PBE MIEP-RARE MIEP/E-VRS1
NFkB-FGFR4 AP2-FGFR4 Isg20-E-box Isg20-ISRE C/EBP-IE1/2 CYP1A1-GRB mCYP1A1-XRE2
mCYP1A1-XRE1 uPA-e-CRE-1 uPA-e-CRE-2 uPA-e-CRE-3 DMef2-DmiR-1 LF-AFP
Pur-1-proximal-CT MRP2-YY1-site insulin-A5/core insulin-Zpal GATA-1-E-box
GATA-1-GATA-site ISG54-ISRE_(1) 2'-5'-OAS-ISRE MAZ_CS MLP-MAZ-site-1
MLP-MAZ-site-2 MLP-MAZ/Sp1-site-1 MLP-MAZ/Sp1-site-2 Fgf-3-PS4A-SOX-site
Fgf-3-PS4A-GATA-site Hox-2.5-DRE2 Hox-2.5-DRE1 ALAS-IRE IRF7-ISRE IRF7-IRFE
ME-TRE alpha2M-ORRE-DR1 alpha2M-ORRE-DR2 SF-1-alpha2M Smad-Race Zen-Race
BPC1-STK-site-1 BPC1-STK-site-4 BPC1-STK-site-7 BPC1-STK-site-8 BPC1-STK-site-9
BPC1-STK-site-10 BPC1-STK-site-12 Box-P-CS Box-L-CS OLE1-O2R-GATA I-BABP-FXRE
PLTP-FXRE SHP-FXRE BSEP-FXRE ApoC-II-FXRE CYP7A1-LXRE ABCG1-LXRE1 ABCG1-LXRE2
ABCA1-LXRE CETP-LXRE SREBP-1c-LXRE LXRalpha-LXRE LPL-LXRE GluB-AACA-2 KLF2-SSRE
PPAR/RXR_CS c-Ski-GTCT/2-CS c-Ski-GTCT/1.5-CS Uga3-UGA1 Leu3-LEU2 UGA1-LEU2-hybrid
LEU2AAGG apoB-element-II D1-kappaB2 erpG-site-1 erpG-site-2 MPBF_CS mammary-specific-CS
mammary-specific-CS2 milk-box-CS1 milk-box-CS2 IKKi-kappaB glucagon-G3A-PISCES
Cctq-CQE1 Ccta-CAE2 Ccta-CAE1 BR-C-dronc-D4 BR-C-dronc-D5-1 BR-C-dronc-D5-2
BR-C-dronc-D6 CYP1A1-DXE1 CYP1A1-DXE2 CYP1A1-DXE3 CYP1A1-DXE4 CYP1A1-DXE6
rCYP1A1-XRE1 rCYP1A1-XRE2 CYP1A1-XRE3 alpha-actin-MCAT-1 alpha-actin-MCAT-2
ARRM W-box mimecan-ISRE-b mimecan-ISRE-c P1-IRF AP-1-ST3 C/EBP-ST3
ANF-NKE MRF-ACCbeta IRSB7 norR2-CRE1 norL-CRE2 AFLR_motif MUC1-ERE-1
MUC1-ERE-2 MUC1-ERE-3 MUC1-ERE-4 MUC1-ERE-5 MUC1-ERE-6 CYP1B1-XRE1/XRE2
CYP1B1-XRE3 CYP1B1-XRE4 CYP1B1-XRE5 IFNA2-PRDIII/PRDI SZF-1_RS ZBRK1_RS
E1A-E2FII ICSBP-pIRE IRF-1/pIRE MIG-pIRE GBP/GAS-pIRE Ino2/Ino4-pNB603
dorsal-tld-1 dorsal-tld-2 dorsal-tld-3 PACM_motif OctT3-S6-1-CS OctT3-S6-3-CS
MGMT-cis9 BCE-1-region-II UBP-BCE-1 ACO-SURE2 DRalpha-S-box DRalpha-Y-box
IRF8-GAS CysC-IECS FREAC-2_CS FREAC-2_CS2 NRF-1_CS2 Elk-1_CS NK-Y_CS ATF3_CS
YY1_CS2 GABP_CS c-Ets-2_CS SREBP-1_CS E4F1_CS2 CHX10_CS ESRRA_CS E4BP4_CS
RSRFC4_CS NF-E2_CS2 MEF-2_CS3 ERR-alpha_CS STAT5A_CS MEIS1_CS Oct-X_CS
Sox-9_CS FREAC-2-CC10-distal FREAC-2-CC10-proximal APP-UE PSEN1-Ets-like-site
APOE-PET mim-1-MRE-A_2 PR264-MRE-C MZF1-munc18-1 Sp1-munc18-1 Sp1-COL1A1-s
CBFA1-CE1-site-a CBFA1-CE1-site-b hIGFBP-1-HRE-1 hIGFBP-1-HRE-2 hIGFBP-1-HRE-3
DR4-1 DR4-2 RORE_2 GPVI-S227 GPVI-G177 GPVI-E48 zen-M1 zen-M2
zen-M3 zen-M4 zen-M5 zen-M6 zen-M7 zen-M8 zen-M9 zen-M10
MD_site twist_site MCK-R_site MyoD:E12_CS Twi:E12_CS hA2M-IL6RE-2 hgamma-fib-IL6RE
Txk-IFN-gamma PAI-1-HRE-2 PAI-1-HRE-1 MIS-RE1 EGFR-VDRE INSM1_CS RFX2-H1tpal
RFX-mSgy RFX-mLamin-c2 cSnail-E7 cSnail-E6 cSnail-E5 XOR-TATA Fbp1-element-A
Cyp2a5-XRE rA2M-IL6RE-2 alpha1-ACT-IL6RE mJunB-IL6RE hLink-protein-GRE
rLink-protein-GRE rLP-AT-rich-element GAGA-Ubx-site-1 GAGA-Ubx-site-2 GAGA-Ubx-site-3
GAGA-Ubx-site-4/5 Col2a1-R2-element EP2 RocR_RS rocG-rocABC-UAS1
rocG-rocABC-UAS2 CTCF-S-2.4-F1 CTCF-144 CTCF_core_motif Ets-GRU-site-A
Ets-GRU-site-B LINE-DE2 IRF-1-DE1 DE1-CS HOF-S17 HOF-S54 HOF-S63 Tcf4-CS
APCDD1-TBM1 APCDD1-TBM2 PREd-site-1 PREd-site-2 PREd-site-3 PREd-site-4
PREd-site-5 PREd-site-6 PHO-en FPGS-S1 FPGS-S2 FPGS-S3 FPGS-S4 FPGS-H1
Ets-1-c-Myb LSE-6 LPL-CT-element LXR-LPL-DR4.1 LXR-LPL-DR4.2 PR-1-LS7
PR-1-LS5 CAD1-A-W-motif CAD1-C3-W-motif PPARg-HGF CEBPB-TGA1 hBNP-GATA
PI-9_ERU PAI-2-TRM Nov-conserved-element NT2-Col11a2 CTF/NF-1-AP-2 AP-2-AP-2
Oct-AP-2 AP-2-initiator Endo16-CG-1 Endo16-CP-1 Endo16-Otx-1 Endo16-Z-1
Endo16-CG-2 Endo16-GCF1-1 Endo16-CG-3 Endo16-CG-4 Endo16-GCF1-2 Endo16-GCF1-3
C4PEPC-site-a C4PEPC-site-b C4PEPC-site-f C4PEPC-site-g C4PEPC-site-h PDP1-S
PDP1-W SnaH-aromatase-CREaro snail-s2 Kr1-site bcd1-site rho-E1 rho-E2
rho-E3 rho-E4 ED-L2/GKLF K4/GKLF GATA-1-rAPP-URE hAPOA5-DR1 OC-box
Skn7p_RS cMG1-oligo-F BETA2/NeuroD-NNAT-1 BETA2/NeuroD-NNAT-2 BETA2/NeuroD-NNAT-3
rNIS-W rNIS-N2 NKE-2 Tcfl5-calmegin collagenase-3-RD-site c-Krox-Balpha1(I)-collagen
c-Krox-Balpha2(I)-collagen c-Krox-264alpha2(I)-collagen c-Krox-CCAATalpha2(I)
HB-Ubx-PRE-1 HB-Ubx-PRE-2 HB-Ubx-PRE-3 HB-Ubx-PRE-4 HB-Ubx-PRE-5 HB-Ubx-PRE-6
HB-Ubx-PRE-7 HB-Ubx-PRE-8 HB-Ubx-PRE-9 HB-Ubx-PRE-10 HB-Ubx-PRE-11 HB-Ubx-PRE-12
HB-Ubx-PRE-13 HB-Ubx-PRE-14 HB-Ubx-PRE-15 HB-Ubx-PRE-16 HB-Ubx-PRE-17 zeste-Ubx-PRE-1
zeste-Ubx-PRE-2 zeste-Ubx-PRE-3 zeste-Ubx-PRE-4 zeste-Ubx-PRE-5 zeste-Ubx-PRE-6
zeste-Ubx-PRE-7 zeste-Ubx-PRE-8 zeste-Ubx-PRE-9 zeste-Ubx-PRE-10 zeste-Ubx-PRE-11
zeste-Ubx-PRE-12 zeste-Ubx-PRE-13 zeste-Ubx-PRE-14 zeste-Ubx-PRE-15 PHO-Ubx-PRE-1
PHO-Ubx-PRE-2 PHO-Ubx-PRE-3 PHO-Ubx-PRE-4 PHO-Ubx-PRE-5 PHO-Ubx-PRE-6 GAGA-Ubx-PRE-1
GAGA-Ubx-PRE-2 GAGA-Ubx-PRE-3 GAGA-Ubx-PRE-4 GAGA-Ubx-PRE-5 GAGA-Ubx-PRE-6
GAGA-Ubx-PRE-7 GAGA-Ubx-PRE-8 GAGA-Ubx-PRE-9 GAGA-Ubx-PRE-10 GAGA-Ubx-PRE-11
GAGA-Ubx-PRE-12 UGT2B17-Pbx UGT1A8-HNF1 UGT1A8-Cdx2 UGT1A10-Cdx2 AGL15_RS
EUO_CS RegR-box Hoxd-12-Shh-1 Hoxd-12-Shh-2 Hoxd-12-Shh-3 Hoxd-12-Shh-4
HNF3-Shh Cdc5_RS Nkx-3.1-TAAGTA Nkx-3.1-mut2 KBE Fis-rrnA-I Fis-rrnA-II
Fis-rrnA-III Fis-rrnA-IV Fis-rrnB-I Fis-rrnB-II Fis-rrnB-III Fis-rrnC-I
Fis-rrnC-II Fis-rrnC-III Fis-rrnD-I Fis-rrnD-II Fis-rrnD-III Fis-rrnD-IV
Fis-rrnD-V Fis-rrnE-I Fis-rrnE-II Fis-rrnE-III Fis-rrnE-IV Fis-rrnE-V Fis-rrnG-I
Fis-rrnG-II Fis-rrnG-III Fis-rrnH-I Fis-rrnH-II Fis-rrnH-III Fis-rrnH-IV
so-lz-first so-hh-first so-hh-second COL1A1-G2046 COL1A1-2046T SF-1-RA
HCMV-IES-Nru-WT0 HCMV-IE5-Nru-WT1 HCMV-IE5-Nru-WT3 HCMV-IE5-WT7 scs'-D-site
cBE76a cBE76b cBE28a cBE28b cBE51 scs'-B-site Pet-1_CS 1.28-DRE-DBS1
1.28-DRE-DBS2 1.28-DRE-DBS3 1.28-DRE-DBS4 DEAF-1-1.28-DRE-1 DEAF-1-1.28-DRE-2
DEAF-1-1.28-DRE-3 DEAF-1-1.28-DRE-4 DEAF-1-1.28-DRE-5 DEAF-1-1.28-DRE-6
DEAF-1-1.28-DRE-7 DEAF-1-1.28-DRE-8 5-HT2AR-FP1 5-H2TAR-FP2 5-H2TAR-FP3
Cited2-DBE Cited2-SRE HA-core-site SAAB-core-site Soule-MLV-core Moloney-MLV-core-site
Akv-core-site MCF247-core-site Rauscher-MCF-core-site TCRgamma-core-site
TCRalpha-core-site MX-core-site TCRbeta-core-site SS4-core-site Mo(core)-core-site
RXR/TR_CS RXR/VDR_CS SAA1-TSR-AP-2d SAA1-TSR-AP-2p Pactolus-probe-38 MtBF_CS
Mt_motif MtBF-A/T MuFL1 MuFL2 MuMt4 MEF2(Des) MuMyoD1_(Des) MuMt5
MHox_CS Col11A2-B/C-enhancer Col11A2-D/E-enhancer Col11A2-F/G-enhancer
GSTA2-PPRE1 GSTA2-PPRE2 GSTA2-PPRE3 P4Halpha(I)-E-box YY1-grp78 ZNF202-ApoAIV
ZNF202-ApoCIII ZNF202-LPL ZNF202-CRABP2 ZNF202-HTGL ZNF202-P16/ALT ZNF202-CALRT1
ZNF202-PLTP ZNF202-IA-1 ZNF202-PLP ZNF202-PNMTA ZNF202-LCAT ZNF202-GOS24
ZNF202-Beta3AR ZNF202-VEGP1 ZNF202-ApoE lysozyme-F2-DIV-6 arrestin-DR12-element
DR+1-PPRE PPARgamma3-C681G CD36-PPRE-G CD36-PPRE-J PPARA-HNF4RE DR-5
DIV-6 INV-0 rMHC-HRE MyoD-HRE alpha-actin-HRE rGH-HRE beta-RARE-SET
5-HTT-VNTR-RP6/7 5-HTT-VNTR-RP3/4 ROR-alpha/beta_CS PNRalpha-CS GATA-4-BMAL1
FBP1-URS1 TAC1-BT2 Sup-Ep1 phiAP3-E1A BTEB-alphaI-collagen TACPyAT-motif
gamma-globin-SSE ERK2-GCII ERK2-GCI ERK2-CAAT-box ProDH-PRE OVO_CS RB-RBF1
twist-rho GATA-5-PR Fshr-Site7/DHS3 myocilin-B-element HMG-1-31BP HMG-I/Y-31BP
E2F-NPAT-I E2F-NPAT-II PTN-HBS AchE-N-int-1 C/EBP-IL12-HSS1 Oct-1/2-IL12-HSS1
HIF-1-1-PGK1 HIF-1-2-PGK1 HIF-1-3-PGK1 HIF-1-1-Glut1 HIF-1-2-Glut1 HIF-1-EPO
CaSRE4 Foxa2-CE-CS3 CSBP-2-epsilon-globin-1 CSBP-2-epsilon-globin-2 CSBP-2-epsilon-globin-3
CSBP-2-FP18-HS3 CSBP-2-FP6-HS3 CSBP-2-FP8-HS3 CSBP-2-CS HOXB2-Otx2 Otx2-HBE1
Villin-Ets/SRE epsi-proximal Sox6-epsilon-globin-S1 Sox6-epsilon-globin-S2
Ubx-sal-1 Ubx-sal-2 Ubx-sal-3 Ubx-sal-4 Ubx-sal-5 Ubx-sal-6 Ubx-sal-7 AP2-alpha-INT3
AP2-alpha-FlinkG AP2-alpha-1C AP2-alpha-1C9G AP2-alpha-1A AP2-alpha-1T
AP2-alpha-3T AP2-alpha-4A AP2-alpha-4T AP2-alpha-4G AP2-alpha-5A AP2-alpha-4T5A
CTCF_CS CTCF-Stin2.12-VNTR Brn-2-CS RXR-ADAM10 TCF4-SMC3 LR1-Slambda1
LR1-Emu LR1-FpA LR1-FpB Lz-dpn-site-1 Lz-dpn-site-2 Lz-D-Pax2 Runx_CS2
SISB/Da-CS1 SISB/Da-CS2 SISB/Da-Sxlp(e)-site-2 SISB/Da-Sxlp(e)-site-9 SISB/Da-Sxlp(e)-site-1
SISB/Da-Sxlp(e)-site-4 SISB/Da-Sxlp(e)-site-5 SISB/Da-Sxlp(e)-site-6 L-RAP-IRF-E
Rpx-dTAAT Rpx-pTAAT Pitx2-Rhx Rhx-GATA H1t/TE2 Ht1/GC Ht1/TE1 STAT5-WAP
HBP1-p47-phox hCD2-HSS3-FT1 hCD2-HSS3-FT2 eNOSM1-786C eNOSW1-786T B29-A+T-rich-element
BSN4 BSN7 BSN8 BSN12 BSN20 BSN15 BSN5-1 BSN17
BSN3 BSN5-2 BSN11 BSN18-3 BSN1 BSN6 BSN9 BSN13
BSN14 BSN18-1 BSN18-2 mafK-GATA-site-1 mafK-GATA-site-2 mafK-GATA-site-3
mafK-GATA-site-4 zen-ZD1 zen-ZD3 zen-B2 zen-B3 zen-B4 zen-B5
zen-B6 ANF-AT-580 ANF-AT-110 Cdx_CS YY1_CS4 SOD-1-nTRE APP-tre KLF15-AceCS2
Sp1-AceCS2 TCF-4-versican iNOS-ISRE EIRE EICE IECS cystatin-C-IECS
cIAP2-CDE/CHR Gbp-GAS Gbp-IRE-1 Gbp-IRE-2 PIII-EICE ZBRK1-ANG1 Tbx2-TBE
Tbx2-N-myc1 Tbx2-N-myc1-2 Tbx2-N-myc1-3 Tbx2-N-myc1-4 Tbx2-N-myc1-5 OsCBT_CS
THABS alphaNAC-RS VpreB-2 VpreB-5 VpreB-7 Oct4-PE2 Oct4-Nanog Sox2-Nanog
CD11a-MS7-RUNX-site C/EBP-CD11a-MS7-C/EBP AFT1-TIS11-1 AFT1-TIS11-2 AFT1-HMX1-1
AFT1-HMX1-2 AFT1-HMX1-3 AFT1-COT1 AFT1-SMF3 AFT1-VHT1 ADA-FP2a ADA-FP2c
ADA-FP2d ADA-FP4 ADA-FP5 EGFR-BTEB1 ST3-DR4 PAI-1-kappaB CP2-GATA-1-HS2-1
GATA-1-p45-NF-E2 GATA-1-EKLF CP2-p45-NF-E2 CP2-EKLF ANF-NBI ANF-NBIII
rPAEC-VEGF-HRE E2F-muCDC7-1 E2F-muCDC7-2 Sp1-hASK-proximal ASK-MP4 rBNP-proximal-GATA
rBNP-distal-GATA rHemopexin-IL6RE hHemopexin-IL6RE rHemopexin-A-site hHemopexin-A-site
APP-Inr CTCF-APP CREB-PEN-2 Claudin-E1 Claudin-E2 C/EBP-IL-8 CCL25-Cdx-TATA
TFII-I-40/fos TFII-I-fos-SIE TFII-I-fos-SRE HBV-CpE NRE-SP-A C/EBP-hSP-D-432
C/EBP-hSP-D-340 C/EBP-hSP-D-319 C/EBP-hSP-D-140 C/EBP-hSP-D-90 27kD-zein-P-box
BLV-TxRE-distal BLV-TxRE-middle BLV-GRE NFkB-BLV-1 NFkB-BLV-2 Stat3-epsilon5u
Stat3-beta5u Stat3-Agamma-globin H-2L-ISRE ZFX-HLA-A11-1 ZFX-HLA-A11-2
diptericin-ICRE Dif-CG15065 Dif-CG13422 Smuc-SMU Smuc-MCK1 Aie-tbs lbd3-WPE
MAZ-PTHR AP-1-IL-6 CREB-IL-6 NF-kB-IL-6 LCAT-IL6RE AAT-ORE CPSI-GAG-element
FoxA-TTR FoxA-H19-E1D-a FoxA-H19-E1D-f EPHX1-reversed-CCAAT

(Linear) MAP of: gi-134133319277-1662.seq check: 4461 from: 1 to: 1386

gi|134133319:277-1662 Homo sapiens nuclear receptor subfamily 1, group H, member
2 (NR1H2), mRNA

With 270 enzymes: *

June 29, 2010 22:31 ..

CviKI-1
PspGI
StyD4I
BbvCI |
BstNI Bpu10I |
ScrFI NlaIV | |
BsaJI | BstNI BmgT120I| | |
PspGI | ScrFI CviKI-1| | |
StyD4I | BslI| HaeIII| | |
BssSI BciVI | | PspGI|| Sau96I|| | |
MnlI XcmI | | StyD4I|| BslI ||| DdeI |
| | | | ||| | ||| | |
ATGTCCTCTCCTACCACGAGTTCCCTGGATACCCCCCTGCCTGGAAATGGCCCCCCTCAG
1 ---------+---------+---------+---------+---------+---------+ 60
TACAGGAGAGGATGGTGCTCAAGGGACCTATGGGGGGACGGACCTTTACCGGGGGGAGTC

a M S S P T T S S L D T P L P G N G P P Q -
b C P L L P R V P W I P P C L E M A P L S -
c V L S Y H E F P G Y P P A W K W P P S A -

NciI
ScrFI
SmaI
BmeT110I|
BsaJI|
HpaII|
NciI|
ScrFI|
AvaI||
BsaJI||
BslI||
StyD4I||
XmaI||
BmgT120I|||
CviKI-1|||
HaeIII|||
StyD4I|||
HphI Sau96I||||
BseMII| BsaJI |||||
BspCNI|| BseRI |||||
BbeI||| BtgI |||||
HaeII||| CviKI-1| |||||
MboII||| NlaIV|| |||||
HhaI|||| HpaII ||| |||||
GlaI||||| Hpy188III ||| |||||
NlaIV||||| BsaWI| ||| |||||
SfoI||||| BspEI| ||| |||||
BsaHI|||||| BmgT120I|| ||| |||||
HinP1I|||||| NlaIV|| ||| |||||
MboII|||||| AvaII||| ||| |||||
MnlI|||||| Sau96I||| ||| |||||
NarI|||||| TaqII |||| ||| |||||
BanI||||||| BceAI | |||| ||| |||||
KasI||||||| MnlI | | |||| ||| |||||
BstNI |||||||| TspRI | | |||| ||| |||||
ScrFI |||||||| HpyCH4III | | | |||| ||| |||||
BslI| |||||||| HpyAV MnlI | | | |||| ||| |||||
|| |||||||| | | | | | |||| ||| |||||
CCTGGCGCCCCTTCTTCTTCACCCACTGTAAAGGAGGAGGGTCCGGAGCCGTGGCCCGGG
61 ---------+---------+---------+---------+---------+---------+ 120
GGACCGCGGGGAAGAAGAAGTGGGTGACATTTCCTCCTCCCAGGCCTCGGCACCGGGCCC

a P G A P S S S P T V K E E G P E P W P G -
b L A P L L L H P L * R R R V R S R G P G -
c W R P F F F T H C K G G G S G A V A R G -

BbvI
Tth111I|
BplI ||
BseMII| ||
BspCNI|| ||
BlsI ||| ||
FokI ||| ||
PstI ||| ||
BisI| ||| ||
Fnu4HI| ||| ||
GluI| ||| ||
HpyCH4V|| ||| ||
TseI|| ||| ||
Cac8I ||| ||| ||
NlaIV SfcI ||| ||| ||
BmgT120I| MwoI| ||| ||| ||
AvaII|| CviKI-1|| ||| ||| ||
Sau96I|| MwoI ||| ||| ||| ||
HpaII ||| SetI ||| ||| ||| ||
Hpy188III ||| BlpI| ||| ||| ||| ||
BsaWI| ||| DdeI| ||| ||| ||| ||
BspEI| ||| BstNI AluI|| ||| ||| ||| ||
BmgT120I|| ||| ScrFI CviKI-1|| ||| ||| ||| ||
NlaIV|| ||| BsaJI | Cac8I ||| ||| ||| ||| ||
AvaII||| ||| PspGI | CviKI-1 | ||| ||| ||| ||| ||
BsmFI||| ||| StyD4I |AlwNI HaeIII | ||| ||| ||| ||| ||
Sau96I||| ||| DrdI | |MnlI|TspRI | | ||| ||| ||| ||| ||
|||| ||| | | | || | | | ||| ||| ||| ||| ||
GGTCCGGACCCTGATGTCCCAGGCACTGATGAGGCCAGCTCAGCCTGCAGCACAGACTGG
121 ---------+---------+---------+---------+---------+---------+ 180
CCAGGCCTGGGACTACAGGGTCCGTGACTACTCCGGTCGAGTCGGACGTCGTGTCTGACC

a G P D P D V P G T D E A S S A C S T D W -
b V R T L M S Q A L M R P A Q P A A Q T G -
c S G P * C P R H * * G Q L S L Q H R L G -

CviKI-1
GsaI
SfaNI |
ApaI| |
BanII| |
Bme1580I| |
Hpy188III Bsp1286I| |
BstKTI| BseYI|| |
MnlI| BmgT120I||| |
DpnI|| CviKI-1||| |
EarI|| HpyAV HaeIII||| |
BstYI ||| Cac8I | NlaIV||| |
MboI ||| HhaI | | BmgT120I|||| |
BmrI | ||| GlaI| | | Sau96I|||| |
AlwI | | ||| HinP1I|| | | EcoO109I||||| |
BtsCI | | | ||| MboII ||| | | PspOMI||||| |
BsrI| | | | ||| NlaIV | ||| | | Sau96I||||| | CspCI
|| | | | ||| | | ||| | | |||||| | |
GTCATCCCAGATCCCGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCCCAGCCCCGAAG
181 ---------+---------+---------+---------+---------+---------+ 240
CAGTAGGGTCTAGGGCTTCTCCTTGGTCTCGCGTTCGCTTTCTTCCCGGGTCGGGGCTTC

a V I P D P E E E P E R K R K K G P A P K -
b S S Q I P K R N Q S A S E R R A Q P R R -
c H P R S R R G T R A Q A K E G P S P E D -

SetI
AluI |
CviKI-1 |
BssSI | |
MboII| | |
CviKI-1|| | |
HaeIII|| | | CviKI-1
BmgT120I||| | | BsmFI| HpyCH4IV
GsaI||| | | HpaII || Hin4I |
Sau96I|||| | | CviKI-1 | || BbvI | |
BceAI||||| | | BsaXI HaeIII | || BsaXI | |
BseYI |||||| | | Hin4I CspCI StuI | ||MnlI | | |
| |||||| | | | | | | || | | | |
ATGCTGGGCCACGAGCTTTGCCGTGTCTGTGGGGACAAGGCCTCCGGCTTCCACTACAAC
241 ---------+---------+---------+---------+---------+---------+ 300
TACGACCCGGTGCTCGAAACGGCACAGACACCCCTGTTCCGGAGGCCGAAGGTGATGTTG

a M L G H E L C R V C G D K A S G F H Y N -
b C W A T S F A V S V G T R P P A S T T T -
c A G P R A L P C L W G Q G L R L P L Q R -

BlsI
SetI
BisI|
Fnu4HI|
GluI| CviKI-1
AluI|| MwoI |
CviKI-1|| MboII | |
MspA1I|| HpyCH4V| | |
PvuII|| BlsI|| | | BstNI
TseI|| BisI||| | | ScrFI
HpyAV||| BseMII||| | | BsaJI CviKI-1 |
BsiHKAI |||| Fnu4HI||| | | BtgI HaeIII |
Bsp1286I |||| GluI||| | | BmgT120I | PspGI |
BbvI| |||| BspCNI|||| | | HhaI AvaII| | StyD4I |
BlpI| ||||CviKI-1|||| | | GlaI| BtsI| | BmgT120I| |
DdeI| |||| MwoI|||| | | TspGWI| FalI| | NlaIV| |
SetI || |||| TseI|||| | | HinP1I|| Sau96I| | Sau96I|| |
TaiI || ||||MwoI ||||| | | HpaII ||| TspRI| | BslI ||| |
| || |||| | ||||| | | | ||| || | | ||| |
GTGCTCAGCTGCGAAGGCTGCAAGGGCTTCTTCCGGCGCAGTGTGGTCCGTGGTGGGGCC
301 ---------+---------+---------+---------+---------+---------+ 360
CACGAGTCGACGCTTCCGACGTTCCCGAAGAAGGCCGCGTCACACCAGGCACCACCCCGG

a V L S C E G C K G F F R R S V V R G G A -
b C S A A K A A R A S S G A V W S V V G P -
c A Q L R R L Q G L L P A Q C G P W W G Q -

HhaI
GlaI|
HinP1I||
EciI TauI||
BspMI| BlsI|||
TspDTI|| BisI||||
NciI SetI ||| Fnu4HI||||
ScrFI BccI| ||| GluI||||
BsaJI| MwoI|| ||| AciI|||||
HaeII HpaII| NlaIV ||| ||| NlaIII|||||
HhaI| StyD4I|| AciI | ||| ||| HgaI ||||||
GlaI|| Cac8I |||BglI | | ||| ||| CviAII| ||||||
HinP1I||| MwoI| |||MwoI | | ||| ||| FatI|| ||||||
|||| || ||| | | | ||| ||| ||| ||||||
AGGCGCTATGCCTGCCGGGGTGGCGGAACCTGCCAGATGGACGCTTTCATGCGGCGCAAG
361 ---------+---------+---------+---------+---------+---------+ 420
TCCGCGATACGGACGGCCCCACCGCCTTGGACGGTCTACCTGCGAAAGTACGCCGCGTTC

a R R Y A C R G G G T C Q M D A F M R R K -
b G A M P A G V A E P A R W T L S C G A S -
c A L C L P G W R N L P D G R F H A A Q V -

HpyCH4V
HhaI |
FspI| |
GlaI| |
HinP1I|| |
BlsI||| |
MwoI||| |
BisI|||| |
Fnu4HI|||| |
GluI|||| |
CviKI-1||||| |
TseI||||| |
BtsI |||||| |
Cac8I |||||| |
NaeI |||||| |
TspRI |||||| |
HpaII| |||||| |
MwoI| |||||| |
BsrFI|| |||||| | BtsI
Cac8I NgoMIV|| |||||| | BtsCI TspRI
BbvI |MwoI ||| ||||||MnlI | MnlI HgaI | FokI |
| | | ||| |||||| | | | | | | |
TGCCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGAGGGAGCAGTGCGTCCTT
421 ---------+---------+---------+---------+---------+---------+ 480
ACGGTCGTCACGGCCGACGCGTTCACGTTCCTCCGTCCCTACTCCCTCGTCACGCAGGAA

a C Q Q C R L R K C K E A G M R E Q C V L -
b A S S A G C A S A R R Q G * G S S A S F -
c P A V P A A Q V Q G G R D E G A V R P F -

BlsI
BisI|
Fnu4HI|
GluI|
TseI||
MboII BsaXI |||
HpaII| Hin4I |||
Hpy188III| MboII | ||| MlyI
BsaWI|| MboII | | ||| PleI|
BspEI|| Hpy188I| | | ||| HpyCH4III||
BstKTI|| MboII || | | ||| MaeIII||
DpnI||| HinfI | || | | ||| Tsp45I||
BstYI |||| TfiI | || | | |||MaeIII |||
AlwI | |||| AcuI | | || | | |||Tsp45I |||
Hpy188I | MboI ||||Eco57MI | | || | | |||HinfI|BbvI |||
| | | |||| | | | || | | ||| || | |||
TCTGAAGAACAGATCCGGAAGAAGAAGATTCGGAAACAACAGCAGCAGGAGTCACAGTCA
481 ---------+---------+---------+---------+---------+---------+ 540
AGACTTCTTGTCTAGGCCTTCTTCTTCTAAGCCTTTGTTGTCGTCGTCCTCAGTGTCAGT

a S E E Q I R K K K I R K Q Q Q Q E S Q S -
b L K N R S G R R R F G N N S S R S H S H -
c * R T D P E E E D S E T T A A G V T V T -

CviKI-1
MnlI |
BseMII| |
BstNI| |
ScrFI| |
BsaJI|| |
BspCNI|| |
CviKI-1||| |
HaeIII||| |
PspGI||| |
StyD4I||| |
BmgT120I|||| |
Sau96I||||| |
BbvI |||||| |
AlwNI| |||||| |
BbvI || |||||| |
CviKI-1| || |||||| |
BbvI || || |||||| |
SetI| || || |||||| |
BlpI|| || || |||||| |
DdeI|| || || |||||| |
TauI AluI||| || || |||||| |
BlsI| CviKI-1||| || || |||||| |
AciI|| BlsI|||| || || |||||| |
BisI|| BisI||||| || || |||||| |
Fnu4HI|| Fnu4HI||||| || || |||||| |
GluI|| GluI||||| || || |||||| |
CviKI-1||| MwoI|||||| || || |||||| |
HaeIII||| TseI|||||| || || |||||| |
BmgT120I|||| BlsI||||||| || || |||||| |
NlaIV|||| BisI|||||||| || || |||||| |
Sau96I||||| Fnu4HI|||||||| || || |||||| |
SetI |||||| GluI|||||||| || || |||||| |
Hin4I | |||||| TseI||||||||| || || |||||| |
BsaXI | | |||||| BlsI|||||||||| || || |||||| |
MaeIII | | | |||||| BisI||||||||||| || || |||||| |
Tsp45I | | | ||||||Fnu4HI||||||||||| || || |||||| |
HphI | | | | |||||| GluI||||||||||| || || |||||| |
HpyCH4III | | | | |||||| TseI|||||||||||| || || |||||| |
| | | | | |||||| ||||||||||||| || || |||||| |
CAGTCGCAGTCACCTGTGGGGCCGCAGGGCAGCAGCAGCTCAGCCTCTGGGCCTGGGGCT
541 ---------+---------+---------+---------+---------+---------+ 600
GTCAGCGTCAGTGGACACCCCGGCGTCCCGTCGTCGTCGAGTCGGAGACCCGGACCCCGA

a Q S Q S P V G P Q G S S S S A S G P G A -
b S R S H L W G R R A A A A Q P L G L G L -
c V A V T C G A A G Q Q Q L S L W A W G F -

MnlI
NciI |
ScrFI |
BbvI| |
BsaJI| |
HpaII| |
BanII|| |
Bsp1286I|| |
HpyAV|| |
StyD4I|| |
NlaIV||| |
CviKI-1|||| |
MwoI ||||| |
BstNI| ||||| |
ScrFI| ||||| |
BsaJI|| ||||| |
CviKI-1||| ||||| |
PspGI||| ||||| |
StyD4I||| ||||| |
BlsI|||| ||||| |
BisI||||| ||||| |
Fnu4HI||||| ||||| |
GluI||||| ||||| |
TseI|||||| ||||| |
Cac8I ||||||| ||||| |
AlwI | ||||||| ||||| |
Hpy188I | | ||||||| ||||| |
DdeI| | | ||||||| ||||| |
BstKTI|| | | ||||||| ||||| |
DpnI||| | | ||||||| ||||| |
BstYI |||| | | ||||||| ||||| |
MboI |||| | | ||||||| ||||| |
MnlI| |||| | | ||||||| ||||| |
BspCNI || |||| | | ||||||| ||||| |
BseMII| || |||| | | ||||||| ||||| |
BstNI| || |||| | | ||||||| ||||| |
ScrFI| || |||| | | ||||||| ||||| | SetI
BsaJI || || |||| | | ||||||| ||||| | AluI |
PspGI || || |||| | | ||||||| ||||| | CviKI-1 |
StyD4I || || |||| | | ||||||| ||||| | BpuEI | |
| || || |||| | | ||||||| ||||| | | | |
TCCCCTGGTGGATCTGAGGCAGGCAGCCAGGGCTCCGGGGAAGGCGAGGGTGTCCAGCTA
601 ---------+---------+---------+---------+---------+---------+ 660
AGGGGACCACCTAGACTCCGTCCGTCGGTCCCGAGGCCCCTTCCGCTCCCACAGGTCGAT

a S P G G S E A G S Q G S G E G E G V Q L -
b P L V D L R Q A A R A P G K A R V S S * -
c P W W I * G R Q P G L R G R R G C P A N -

Hpy188III BmgT120I
SmlI | CviKI-1
CviKI-1| | HaeIII
TauI| | TauI
BlsI|| | BlsI| BtsI
AloI||| | Sau96I| TspRI
BisI||| | BisI|| HpyCH4V |
Fnu4HI||| | Fnu4HI|| PstI | |
GluI||| | BstKTI GluI|| HpyCH4V | | |
AciI|||| | DpnI| BslI AciI||| BsaXI | | | |
MspA1I|||| | AlwI MboI || PflMI AloI||| SfcI | | | |MwoI
||||| | | | || | |||| | | | | | |
ACAGCGGCTCAAGAACTAATGATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAA
661 ---------+---------+---------+---------+---------+---------+ 720
TGTCGCCGAGTTCTTGATTACTAGGTCGTCAACCACCGCCGGGTTGACGTCACGTTGTTT

a T A A Q E L M I Q Q L V A A Q L Q C N K -
b Q R L K N * * S S S W W R P N C S A T N -
c S G S R T N D P A V G G G P T A V Q Q T -

BmrI
HhaI |
GlaI| |
HinP1I|| |
BsmFI ||| |
BstNI | ||| |
Hin4I | ||| |
ScrFI | ||| |
BsaJI| | ||| |
PasI| | ||| |
BsaJI|| | ||| |
PspGI|| | ||| |
StyD4I|| | ||| |
NlaIV||| | ||| |
BmgT120I|||| | ||| |
CviKI-1|||| | ||| |
HaeIII|||| | ||| |
MmeI||||| | ||| |
Sau96I||||| | ||| | BmeT110I
BstNI |||||| | ||| | AvaI|
CviKI-1 ScrFI |||||| | ||| | Hpy188III|
BsaXI | BsaJI | |||||| | ||| | AhdI ||
HpyAV| |MaeIII PspGI | |||||| | ||| | BsrI ||
Hpy188I || |Tsp45I StyD4I | |||||| | ||| | SfaNI ||
| || | | | | |||||| | ||| | | ||
CGCTCCTTCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGGGCGCAGACCCCCAGTCC
721 ---------+---------+---------+---------+---------+---------+ 780
GCGAGGAAGAGGCTGGTCGGGTTTCAGTGCGGGACCGGGGACCCGCGTCTGGGGGTCAGG

a R S F S D Q P K V T P W P L G A D P Q S -
b A P S P T S P K S R P G P W A Q T P S P -
c L L L R P A Q S H A L A P G R R P P V P -

CviKI-1
HaeIII BstNI
MscI ScrFI
MwoI Cac8I | PfoI |
FauI| EaeI | PspGI |
Cac8I || SetI | StyD4I |
Hin4I| || AluI | | BccI | |
AciI || || CviKI-1 | | DdeI| | |
Cac8I || || BslI AlfI| | |TspGWI || | |
| || || | || | | | || | |
CGAGATGCCCGCCAGCAACGCTTTGCCCACTTCACGGAGCTGGCCATCATCTCAGTCCAG
781 ---------+---------+---------+---------+---------+---------+ 840
GCTCTACGGGCGGTCGTTGCGAAACGGGTGAAGTGCCTCGACCGGTAGTAGAGTCAGGTC

a R D A R Q Q R F A H F T E L A I I S V Q -
b E M P A S N A L P T S R S W P S S Q S R -
c R C P P A T L C P L H G A G H H L S P G -

BmgT120I
AvaII|
Sau96I|
BbvI ||
NciI | ||
ScrFI | ||
HpaII| | ||
CviKI-1|| | ||
HaeIII|| | ||
StyD4I|| | ||
BmgT120I||| | ||
GsaI||| | ||
MnlI|||| | ||
Sau96I|||| | ||
SetI||||| | ||
AluI |||||| | ||
BseYI |||||| | ||
BslI |||||| | ||
CviKI-1 |||||| | ||
MspA1I |||||| | ||
PvuII |||||| | ||
BlsI| |||||| | ||
PstI| |||||| | ||
Hpy166II BisI|| |||||| | ||
BseMII | Fnu4HI|| |||||| | ||
BstKTI | BstNI GluI|| |||||| | ||
BspCNI| | ScrFI HpyCH4V||| |||||| | ||
DpnI| | BlpI PspGI | TseI||| |||||| | ||
MboI || | DdeI StyD4I | SfcI |||| |||||| | ||MboI
| || | | | | | |||| |||||| | || |
GAGATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCTGCAGCTGGGCCGGGAGGACCAG
841 ---------+---------+---------+---------+---------+---------+ 900
CTCTAGCACCTGAAGCGATTCGTTCACGGACCAAAGGACGTCGACCCGGCCCTCCTGGTC

a E I V D F A K Q V P G F L Q L G R E D Q -
b R S W T S L S K C L V S C S W A G R T R -
c D R G L R * A S A W F P A A G P G G P D -

BfaI
BlsI |
BisI| |
BsmAI| |
Fnu4HI| |
GluI| |
NlaIII|| |
TseI|| |
CviAII ||| |
BstKTI| ||| |
FatI| ||| | HaeII
BtsCI AcuI|| ||| | HhaI|
BslI | DpnI|| ||| | GlaI||
EcoNI | | Eco57MI|| ||| | HinP1I|||
Hpy188III| | | MboI ||| ||| | BstNI ||||
HpyAV || | | Hpy188III | ||| ||| | ScrFI ||||
FokI | || | | TaqI| | ||| ||| | CviKI-1 | ||||
BstKTI| | || | | SfaNI|| | ||| ||| | PspGI | ||||
DpnI|| | || |MnlI BbvI ||| | ||| ||| | StyD4I | ||||
||| | || | | | ||| | ||| ||| | | | ||||
ATCGCCCTCCTGAAGGCATCCACTATCGAGATCATGCTGCTAGAGACAGCCAGGCGCTAC
901 ---------+---------+---------+---------+---------+---------+ 960
TAGCGGGAGGACTTCCGTAGGTGATAGCTCTAGTACGACGATCTCTGTCGGTCCGCGATG

a I A L L K A S T I E I M L L E T A R R Y -
b S P S * R H P L S R S C C * R Q P G A T -
c R P P E G I H Y R D H A A R D S Q A L Q -

XmnI
HpyAV|
HphI ||
Hpy188III | ||
BssSI SetI | | || SetI
BsmAI | HphI HpyAV| | | || SfcI| BdaI
| | | || | | || || |
AACCACGAGACAGAGTGTATCACCTTCTTGAAGGACTTCACCTACAGCAAGGACGACTTC
961 ---------+---------+---------+---------+---------+---------+ 1020
TTGGTGCTCTGTCTCACATAGTGGAAGAACTTCCTGAAGTGGATGTCGTTCCTGCTGAAG

a N H E T E C I T F L K D F T Y S K D D F -
b T T R Q S V S P S * R T S P T A R T T S -
c P R D R V Y H L L E G L H L Q Q G R L P -

SetI
BslI |
PstI| |
SbfI| |
HpyCH4V || |
TspDTI || | AciI
Cac8I | || | NlaIII
SfcI | || | CviAII |
FalI| | || | MwoI |
CviKI-1|| | || | FatI| |
HaeIII|| | || | CviKI-1|| |
StuI|| | || | HaeIII|| |
Cac8I ||| | || | BmgT120I||| |
HpyCH4V | ||| | || | Cac8I|||| |
AarI| | ||| | || | FauI Sau96I|||| |
BspMI| | ||| | || | MboII BccI| AciI ||||| |
HpyCH4III || | ||| | || | BsgI | TaqI || BstUI ||||| |
| || | ||| | || | | | | || | ||||| |
CACCGTGCAGGCCTGCAGGTGGAGTTCATCAACCCCATCTTCGAGTTCTCGCGGGCCATG
1021 ---------+---------+---------+---------+---------+---------+ 1080
GTGGCACGTCCGGACGTCCACCTCAAGTAGTTGGGGTAGAAGCTCAAGAGCGCCCGGTAC

a H R A G L Q V E F I N P I F E F S R A M -
b T V Q A C R W S S S T P S S S S R G P C -
c P C R P A G G V H Q P H L R V L A G H A -

BspCNI
BseMII|
BstNI||
ScrFI||
CviKI-1 |||
HaeIII |||
PspGI |||
StyD4I |||
BmgT120I| |||
GsaI| |||
Sau96I|| |||
BseYI ||| |||
CviKI-1 ||| |||
TauI ||| |||
BlsI| ||| |||
BisI|| ||| |||
Fnu4HI|| ||| |||
GluI|| ||| |||
AciI||| ||| |||
TauI||| ||| ||| HgaI
XcmI||| ||| ||| MwoI
BlsI|||| ||| ||| RsaI
BslI|||| ||| ||| CviQI|
BisI||||| ||| ||| BtgZI ||
Fnu4HI||||| ||| ||| DdeI| || EaeI
GluI||||| ||| ||| Hpy99I|| || NmeAIII MboII BccI EagI
|||||| ||| ||| ||| || | | | |
CGGCGGCTGGGCCTGGACGACGCTGAGTACGCCCTGCTCATCGCCATCAACATCTTCTCG
1081 ---------+---------+---------+---------+---------+---------+ 1140
GCCGCCGACCCGGACCTGCTGCGACTCATGCGGGACGAGTAGCGGTAGTTGTAGAAGAGC

a R R L G L D D A E Y A L L I A I N I F S -
b G G W A W T T L S T P C S S P S T S S R -
c A A G P G R R * V R P A H R H Q H L L G -

BstUI
TauI
BlsI|
AciI||
BisI||
Fnu4HI||
GluI||
MnlI||
CviKI-1|||
HaeIII|||
BmgT120I||||
Sau96I||||| BbvI
NciI|||||| SetI|
ScrFI|||||| TaiI|
HpaII||||||| BbvI ||
CviKI-1|||||||| BsaAI ||
HpyCH4V ||||||||| HpyCH4IV| ||
SetI| ||||||||| MnlI || ||
TaiI| ||||||||| BbvI| || ||
MwoI || ||||||||| CviKI-1 || || ||
HpyCH4IV| || ||||||||| BlsI| || || ||
BmgT120I || || ||||||||| BisI|| || || ||
CviKI-1 || || ||||||||| Fnu4HI|| || || ||
HaeIII || || ||||||||| GluI|| || || ||
Sau96I| || || ||||||||| TseI||| || || ||
BsiEI || || || ||||||||| BlsI|||| || || ||
HpaII || || || ||||||||| BisI||||| || || ||
BsrFI| || || || ||||||||| Fnu4HI||||| || || ||
BsiEI || || || || ||||||||| GluI||||| || || ||
CviKI-1| || || || ||StyD4I|||||||| BsgI HpyCH4V|||||| || || ||
HaeIII| || || || ||NlaIV|||||||||BslI| TseI|||||| || || ||
|| || || || || |||||||||| || ||||||| || || ||
GCCGACCGGCCCAACGTGCAGGAGCCGGGCCGCGTGGAGGCGTTGCAGCAGCCCTACGTG
1141 ---------+---------+---------+---------+---------+---------+ 1200
CGGCTGGCCGGGTTGCACGTCCTCGGCCCGGCGCACCTCCGCAACGTCGTCGGGATGCAC

a A D R P N V Q E P G R V E A L Q Q P Y V -
b P T G P T C R S R A A W R R C S S P T W -
c R P A Q R A G A G P R G G V A A A L R G -

HhaI
GlaI|
HinP1I||
BlsI|||
SetI|||
BisI||||
Fnu4HI||||
GluI||||
AluI|||||
CviKI-1|||||
MspA1I|||||
PvuII|||||
TseI|||||
MwoI ||||||
BmgT120I | ||||||
AvaII| | ||||||
Sau96I| | ||||||
TauI || | ||||||
BlsI| || | ||||||
AciI|| || | ||||||
BisI|| || | ||||||
BlsI Fnu4HI|| || | |||||| CviAII
BisI| GluI|| || | |||||| FatI|
Fnu4HI| CviKI-1||| || | |||||| HhaI|
GluI| Hpy188III |||| || | |||||| GlaI||
HaeII| HhaI | |||| || | |||||| BstUI|||
HhaI|| MnlI | |||| || | |||||| HinP1I|||
TseI|| GlaI| |HaeIII||| || | |||||| MwoI||||
GlaI||| BstUI|| | BbvI|||| || | |||||| AciI|||||
HinP1I|||| HinP1I|| |SfaNI|||| || | ||||||MwoI||||||
||||| ||| | ||||| || | |||||| |||||||
GAGGCGCTGCTGTCCTACACGCGCATCAAGAGGCCGCAGGACCAGCTGCGCTTCCCGCGC
1201 ---------+---------+---------+---------+---------+---------+ 1260
CTCCGCGACGACAGGATGTGCGCGTAGTTCTCCGGCGTCCTGGTCGACGCGAAGGGCGCG

a E A L L S Y T R I K R P Q D Q L R F P R -
b R R C C P T R A S R G R R T S C A S R A -
c G A A V L H A H Q E A A G P A A L P A H -

BbsI
Hpy188I
MboII
Bme1580I |
BsiHKAI |
Bsp1286I |
BspMI | |
Hpy166II | |
HpyCH4V | |
ApaLI | | |
BanII | | | |
BsiHKAI | | | |
Bsp1286I | | | |
SacI | | | |
SetI | | | |
AluI | | | | |
CviKI-1 | | | | |
EcoICRI | | | | |
MwoI | | | | | |
BlpI| | | | | | |
DdeI| | | | | | |
Cac8I || | | | | | |
HphI| || | | | | | |
HhaI|| || | | | | | |
FspI||| || | | | | | |
GlaI||| || | | | | | |
HinP1I|||| || | | | | | |
BspCNI||||| || | | | | | |
BseMII|||||| || | | | | | |
Cac8I|||||| || | | | | | |
TspDTI|||||| || | | | | | |
CviKI-1 ||||||| || | | | | | |
SetI | ||||||| || | | | | | |
AluI | | ||||||| || | | | | | |
CviKI-1 | | ||||||| || | | | | | |
MwoI | | | ||||||| || | | | | | |
NlaIII | | | ||||||| || | | | | | |
CviAII | | | | ||||||| || | | | | | |
Hpy188III | | | | ||||||| || | | | | | |
BspHI| | | | | ||||||| || | | | | | |
FatI| | | | | ||||||| || | | | | | |
MslI|| | | | | ||||||| || | | | | | |
NlaIII||| | | | | ||||||| || | | | | | |
NspI||| | | | | ||||||| || | | | | | | SetI
SphI||| | | | | ||||||| || | | | | | | BpmI|
FauI|||| | | | | ||||||| || | | | | | |Eco57MI|
Cac8I||||| | | | | ||||||| || | | | | |MwoI ||
|||||| | | | | ||||||| || | | | | | | ||
ATGCTCATGAAGCTGGTGAGCCTGCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTTC
1261 ---------+---------+---------+---------+---------+---------+ 1320
TACGAGTACTTCGACCACTCGGACGCGTGCGACTCGAGACACGTGAGCCTCGTCCAGAAG

a M L M K L V S L R T L S S V H S E Q V F -
b C S * S W * A C A R * A L C T R S R S S -
c A H E A G E P A H A E L C A L G A G L R -

MwoI
TauI | BssSI
BstNI BlsI| | Hpy166II|
ScrFI AciI|| | AatII||
BbvI | BisI|| | SetI||
PfoI | Fnu4HI|| | TaiI||
PspGI | GluI|| | ZraI |||
StyD4I | BlsI ||| | BsaHI| |||
NlaIV| | SetI ||| | HpyCH4IV| |||
CviKI-1|| | BisI| ||| | BstKTI || |||
TauI|| | Fnu4HI| ||| | DpnI| || |||
BlsI||| | GluI| ||| | BglII || || |||
BisI|||| | AluI|| ||| | BstYI || || |||
Fnu4HI|||| | CviKI-1|| ||| | MboI || || |||
GluI|||| | TseI|| ||| | Hpy188I | || || |||
AciI||||| | MmeI ||| ||| | MnlI| | || || |||
|||||| | | ||| ||| | || | || || |||
GCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCTGCTGTCGGAGATCTGGGACGTCCAC
1321 ---------+---------+---------+---------+---------+---------+ 1380
CGGAACGCCGAGGTCCTGTTCTTCGACGGCGGAGACGACAGCCTCTAGACCCTGCAGGTG

a A L R L Q D K K L P P L L S E I W D V H -
b P C G S R T R S C R L C C R R S G T S T -
c L A A P G Q E A A A S A V G D L G R P R -

BsmFI
|
GAGTGA
1381 ------ 1386
CTCACT

a E * -
b S -
c V -

Enzymes that do cut:

AarI AatII AciI AcuI AhdI AlfI AloI AluI
AlwI AlwNI

看看有多少個鏈?


除了 protein/DNA 鏈chains之外 ，有沒有其它的東西?


呈現疏水性的胺基酸


哪裡是 a-螺旋和 b-長帶?

以nr1h2 protein為例


將nr1h2 protein 序列以ExPASy分析其分子量及等電點

Compute pI/Mw
Theoretical pI/Mw (average) for the user-entered sequence:

MSSPTTSSLDTPLPGNGPPQPGAPSSSPTVKEEGPEPWPGGPDPDVPGTDEASSACSTDWVIPDPEEEPE
RKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRK
CQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQ
GSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQ
EIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFI
NPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPR
MLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE


Theoretical pI/Mw: 7.90 / 51101.93

ORF Finder results
Results for 1386 residue sequence "Untitled" starting "ATGTCCTCTC"

>ORF number 1 in reading frame 1 on the direct strand extends from base 1 to base 1386. ATGTCCTCTCCTACCACGAGTTCCCTGGATACCCCCCTGCCTGGAAATGGCCCCCCTCAG CCTGGCGCCCCTTCTTCTTCACCCACTGTAAAGGAGGAGGGTCCGGAGCCGTGGCCCGGG GGTCCGGACCCTGATGTCCCAGGCACTGATGAGGCCAGCTCAGCCTGCAGCACAGACTGG GTCATCCCAGATCCCGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCCCAGCCCCGAAG ATGCTGGGCCACGAGCTTTGCCGTGTCTGTGGGGACAAGGCCTCCGGCTTCCACTACAAC GTGCTCAGCTGCGAAGGCTGCAAGGGCTTCTTCCGGCGCAGTGTGGTCCGTGGTGGGGCC AGGCGCTATGCCTGCCGGGGTGGCGGAACCTGCCAGATGGACGCTTTCATGCGGCGCAAG TGCCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGAGGGAGCAGTGCGTCCTT TCTGAAGAACAGATCCGGAAGAAGAAGATTCGGAAACAACAGCAGCAGGAGTCACAGTCA CAGTCGCAGTCACCTGTGGGGCCGCAGGGCAGCAGCAGCTCAGCCTCTGGGCCTGGGGCT TCCCCTGGTGGATCTGAGGCAGGCAGCCAGGGCTCCGGGGAAGGCGAGGGTGTCCAGCTA ACAGCGGCTCAAGAACTAATGATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAA CGCTCCTTCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGGGCGCAGACCCCCAGTCC CGAGATGCCCGCCAGCAACGCTTTGCCCACTTCACGGAGCTGGCCATCATCTCAGTCCAG GAGATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCTGCAGCTGGGCCGGGAGGACCAG ATCGCCCTCCTGAAGGCATCCACTATCGAGATCATGCTGCTAGAGACAGCCAGGCGCTAC AACCACGAGACAGAGTGTATCACCTTCTTGAAGGACTTCACCTACAGCAAGGACGACTTC CACCGTGCAGGCCTGCAGGTGGAGTTCATCAACCCCATCTTCGAGTTCTCGCGGGCCATG CGGCGGCTGGGCCTGGACGACGCTGAGTACGCCCTGCTCATCGCCATCAACATCTTCTCG GCCGACCGGCCCAACGTGCAGGAGCCGGGCCGCGTGGAGGCGTTGCAGCAGCCCTACGTG GAGGCGCTGCTGTCCTACACGCGCATCAAGAGGCCGCAGGACCAGCTGCGCTTCCCGCGC ATGCTCATGAAGCTGGTGAGCCTGCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTTC GCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCTGCTGTCGGAGATCTGGGACGTCCAC GAGTGA

>Translation of ORF number 1 in reading frame 1 on the direct strand.
MSSPTTSSLDTPLPGNGPPQPGAPSSSPTVKEEGPEPWPGGPDPDVPGTDEASSACSTDW
VIPDPEEEPERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGA
RRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQS
QSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNK
RSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQ
IALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAM
RRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPR
MLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE*

>ORF number 1 in reading frame 2 on the direct strand extends from base 2 to base 91.
TGTCCTCTCCTACCACGAGTTCCCTGGATACCCCCCTGCCTGGAAATGGCCCCCCTCAGC
CTGGCGCCCCTTCTTCTTCACCCACTGTAA


>Translation of ORF number 1 in reading frame 2 on the direct strand.
CPLLPRVPWIPPCLEMAPLSLAPLLLHPL*

>ORF number 2 in reading frame 2 on the direct strand extends from base 92 to base 463.
AGGAGGAGGGTCCGGAGCCGTGGCCCGGGGGTCCGGACCCTGATGTCCCAGGCACTGATG
AGGCCAGCTCAGCCTGCAGCACAGACTGGGTCATCCCAGATCCCGAAGAGGAACCAGAGC
GCAAGCGAAAGAAGGGCCCAGCCCCGAAGATGCTGGGCCACGAGCTTTGCCGTGTCTGTG
GGGACAAGGCCTCCGGCTTCCACTACAACGTGCTCAGCTGCGAAGGCTGCAAGGGCTTCT
TCCGGCGCAGTGTGGTCCGTGGTGGGGCCAGGCGCTATGCCTGCCGGGGTGGCGGAACCT
GCCAGATGGACGCTTTCATGCGGCGCAAGTGCCAGCAGTGCCGGCTGCGCAAGTGCAAGG
AGGCAGGGATGA

>Translation of ORF number 2 in reading frame 2 on the direct strand.
RRRVRSRGPGVRTLMSQALMRPAQPAAQTGSSQIPKRNQSASERRAQPRRCWATSFAVSV
GTRPPASTTTCSAAKAARASSGAVWSVVGPGAMPAGVAEPARWTLSCGASASSAGCASAR
RQG*

>ORF number 3 in reading frame 2 on the direct strand extends from base 464 to base 661.
GGGAGCAGTGCGTCCTTTCTGAAGAACAGATCCGGAAGAAGAAGATTCGGAAACAACAGC
AGCAGGAGTCACAGTCACAGTCGCAGTCACCTGTGGGGCCGCAGGGCAGCAGCAGCTCAG
CCTCTGGGCCTGGGGCTTCCCCTGGTGGATCTGAGGCAGGCAGCCAGGGCTCCGGGGAAG
GCGAGGGTGTCCAGCTAA

>Translation of ORF number 3 in reading frame 2 on the direct strand.
GSSASFLKNRSGRRRFGNNSSRSHSHSRSHLWGRRAAAAQPLGLGLPLVDLRQAARAPGK
ARVSS*

>ORF number 4 in reading frame 2 on the direct strand extends from base 683 to base 913.
TCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAACGCTCCTTCTCCGACCAGCCCA
AAGTCACGCCCTGGCCCCTGGGCGCAGACCCCCAGTCCCGAGATGCCCGCCAGCAACGCT
TTGCCCACTTCACGGAGCTGGCCATCATCTCAGTCCAGGAGATCGTGGACTTCGCTAAGC
AAGTGCCTGGTTTCCTGCAGCTGGGCCGGGAGGACCAGATCGCCCTCCTGA

>Translation of ORF number 4 in reading frame 2 on the direct strand.
SSSWWRPNCSATNAPSPTSPKSRPGPWAQTPSPEMPASNALPTSRSWPSSQSRRSWTSLS
KCLVSCSWAGRTRSPS*

gi|194294518:195-1403 Homo sapiens nuclear receptor subfamily 1, group H, member
3 (NR1H3), transcript variant 3, mRNA

1 ..

1 ATGCCCCACT CTGCTGGGGG TACTGCAGGG GTGGGGCTGG AGGCTGCAGA

51 GCCCACAGCC CTGCTCACCA GGGCAGAGCC CCCTTCAGAA CCCACAGAGA

101 TCCGTCCACA AAAGCGGAAA AAGGGGCCAG CCCCCAAAAT GCTGGGGAAC

151 GAGCTATGCA GCGTGTGTGG GGACAAGGCC TCGGGCTTCC ACTACAATGT

201 TCTGAGCTGC GAGGGCTGCA AGGGATTCTT CCGCCGCAGC GTCATCAAGG

251 GAGCGCACTA CATCTGCCAC AGTGGCGGCC ACTGCCCCAT GGACACCTAC

301 ATGCGTCGCA AGTGCCAGGA GTGTCGGCTT CGCAAATGCC GTCAGGCTGG

351 CATGCGGGAG GAGTGTGTCC TGTCAGAAGA ACAGATCCGC CTGAAGAAAC

401 TGAAGCGGCA AGAGGAGGAA CAGGCTCATG CCACATCCTT GCCCCCCAGG

451 GCTTCCTCAC CCCCCCAAAT CCTGCCCCAG CTCAGCCCGG AACAACTGGG

501 CATGATCGAG AAGCTCGTCG CTGCCCAGCA ACAGTGTAAC CGGCGCTCCT

551 TTTCTGACCG GCTTCGAGTC ACGCCTTGGC CCATGGCACC AGATCCCCAT

601 AGCCGGGAGG CCCGTCAGCA GCGCTTTGCC CACTTCACTG AGCTGGCCAT

651 CGTCTCTGTG CAGGAGATAG TTGACTTTGC TAAACAGCTA CCCGGCTTCC

701 TGCAGCTCAG CCGGGAGGAC CAGATTGCCC TGCTGAAGAC CTCTGCGATC

751 GAGGTGATGC TTCTGGAGAC ATCTCGGAGG TACAACCCTG GGAGTGAGAG

801 TATCACCTTC CTCAAGGATT TCAGTTATAA CCGGGAAGAC TTTGCCAAAG

851 CAGGGCTGCA AGTGGAATTC ATCAACCCCA TCTTCGAGTT CTCCAGGGCC

901 ATGAATGAGC TGCAACTCAA TGATGCCGAG TTTGCCTTGC TCATTGCTAT

951 CAGCATCTTC TCTGCAGACC GGCCCAACGT GCAGGACCAG CTCCAGGTAG

1001 AGAGGCTGCA GCACACATAT GTGGAAGCCC TGCATGCCTA CGTCTCCATC

1051 CACCATCCCC ATGACCGACT GATGTTCCCA CGGATGCTAA TGAAACTGGT

1101 GAGCCTCCGG ACCCTGAGCA GCGTCCACTC AGAGCAAGTG TTTGCACTGC

1151 GTCTGCAGGA CAAAAAGCTC CCACCGCTGC TCTCTGAGAT CTGGGATGTG

1201 CACGAATGA

gi|194328805:222-1385 Homo sapiens nuclear receptor subfamily 1, group H, member
3 (NR1H3), transcript variant 2, mRNA

9 ..

1 ATGTCCTTGT GGCTGGGGGC CCCTGTGCCT GACATTCCTC CTGACTCTGC

51 GGTGGAGCTG TGGAAGCCAG GCGCACAGGA TGCAAGCAGC CAGGCCCAGG

101 GAGGCAGCAG CTGCATCCTC AGAGAGGAAG CCAGGATGCC CCACTCTGCT

151 GGGGGTACTG CAGGGGTGGG GCTGGAGGCT GCAGAGCCCA CAGCCCTGCT

201 CACCAGGGCA GAGCCCCCTT CAGAACCCAC AGAGATCCGT CCACAAAAGC

251 GGAAAAAGGG GCCAGCCCCC AAAATGCTGG GGAACGAGCT ATGCAGCGTG

301 TGTGGGGACA AGGCCTCGGG CTTCCACTAC AATGTTCTGA GCTGCGAGGG

351 CTGCAAGGGA TTCTTCCGCC GCAGCGTCAT CAAGGGAGCG CACTACATCT

401 GCCACAGTGG CGGCCACTGC CCCATGGACA CCTACATGCG TCGCAAGTGC

451 CAGGAGTGTC GGCTTCGCAA ATGCCGTCAG GCTGGCATGC GGGAGGAGTG

501 TGTCCTGTCA GAAGAACAGA TCCGCCTGAA GAAACTGAAG CGGCAAGAGG

551 AGGAACAGGC TCATGCCACA TCCTTGCCCC CCAGGGCTTC CTCACCCCCC

601 CAAATCCTGC CCCAGCTCAG CCCGGAACAA CTGGGCATGA TCGAGAAGCT

651 CGTCGCTGCC CAGCAACAGT GTAACCGGCG CTCCTTTTCT GACCGGCTTC

701 GAGTCACGGT GATGCTTCTG GAGACATCTC GGAGGTACAA CCCTGGGAGT

751 GAGAGTATCA CCTTCCTCAA GGATTTCAGT TATAACCGGG AAGACTTTGC

801 CAAAGCAGGG CTGCAAGTGG AATTCATCAA CCCCATCTTC GAGTTCTCCA

851 GGGCCATGAA TGAGCTGCAA CTCAATGATG CCGAGTTTGC CTTGCTCATT

901 GCTATCAGCA TCTTCTCTGC AGACCGGCCC AACGTGCAGG ACCAGCTCCA

951 GGTAGAGAGG CTGCAGCACA CATATGTGGA AGCCCTGCAT GCCTACGTCT

1001 CCATCCACCA TCCCCATGAC CGACTGATGT TCCCACGGAT GCTAATGAAA

1051 CTGGTGAGCC TCCGGACCCT GAGCAGCGTC CACTCAGAGC AAGTGTTTGC

1101 ACTGCGTCTG CAGGACAAAA AGCTCCCACC GCTGCTCTCT GAGATCTGGG

1151 ATGTGCACGA ATGA

gi|194294516:222-1565 Homo sapiens nuclear receptor subfamily 1, group H, member
3 (NR1H3), transcript variant 1, mRNA

..

1 ATGTCCTTGT GGCTGGGGGC CCCTGTGCCT GACATTCCTC CTGACTCTGC

51 GGTGGAGCTG TGGAAGCCAG GCGCACAGGA TGCAAGCAGC CAGGCCCAGG

101 GAGGCAGCAG CTGCATCCTC AGAGAGGAAG CCAGGATGCC CCACTCTGCT

151 GGGGGTACTG CAGGGGTGGG GCTGGAGGCT GCAGAGCCCA CAGCCCTGCT

201 CACCAGGGCA GAGCCCCCTT CAGAACCCAC AGAGATCCGT CCACAAAAGC

251 GGAAAAAGGG GCCAGCCCCC AAAATGCTGG GGAACGAGCT ATGCAGCGTG

301 TGTGGGGACA AGGCCTCGGG CTTCCACTAC AATGTTCTGA GCTGCGAGGG

351 CTGCAAGGGA TTCTTCCGCC GCAGCGTCAT CAAGGGAGCG CACTACATCT

401 GCCACAGTGG CGGCCACTGC CCCATGGACA CCTACATGCG TCGCAAGTGC

451 CAGGAGTGTC GGCTTCGCAA ATGCCGTCAG GCTGGCATGC GGGAGGAGTG

501 TGTCCTGTCA GAAGAACAGA TCCGCCTGAA GAAACTGAAG CGGCAAGAGG

551 AGGAACAGGC TCATGCCACA TCCTTGCCCC CCAGGGCTTC CTCACCCCCC

601 CAAATCCTGC CCCAGCTCAG CCCGGAACAA CTGGGCATGA TCGAGAAGCT

651 CGTCGCTGCC CAGCAACAGT GTAACCGGCG CTCCTTTTCT GACCGGCTTC

701 GAGTCACGCC TTGGCCCATG GCACCAGATC CCCATAGCCG GGAGGCCCGT

751 CAGCAGCGCT TTGCCCACTT CACTGAGCTG GCCATCGTCT CTGTGCAGGA

801 GATAGTTGAC TTTGCTAAAC AGCTACCCGG CTTCCTGCAG CTCAGCCGGG

851 AGGACCAGAT TGCCCTGCTG AAGACCTCTG CGATCGAGGT GATGCTTCTG

901 GAGACATCTC GGAGGTACAA CCCTGGGAGT GAGAGTATCA CCTTCCTCAA

951 GGATTTCAGT TATAACCGGG AAGACTTTGC CAAAGCAGGG CTGCAAGTGG

1001 AATTCATCAA CCCCATCTTC GAGTTCTCCA GGGCCATGAA TGAGCTGCAA

1051 CTCAATGATG CCGAGTTTGC CTTGCTCATT GCTATCAGCA TCTTCTCTGC

1101 AGACCGGCCC AACGTGCAGG ACCAGCTCCA GGTAGAGAGG CTGCAGCACA

1151 CATATGTGGA AGCCCTGCAT GCCTACGTCT CCATCCACCA TCCCCATGAC

1201 CGACTGATGT TCCCACGGAT GCTAATGAAA CTGGTGAGCC TCCGGACCCT

1251 GAGCAGCGTC CACTCAGAGC AAGTGTTTGC ACTGCGTCTG CAGGACAAAA

1301 AGCTCCCACC GCTGCTCTCT GAGATCTGGG ATGTGCACGA ATGA

gi|134133319:277-1662 Homo sapiens nuclear receptor subfamily 1, group H, member
2 (NR1H2), mRNA

1 ..

1 ATGTCCTCTC CTACCACGAG TTCCCTGGAT ACCCCCCTGC CTGGAAATGG

51 CCCCCCTCAG CCTGGCGCCC CTTCTTCTTC ACCCACTGTA AAGGAGGAGG

101 GTCCGGAGCC GTGGCCCGGG GGTCCGGACC CTGATGTCCC AGGCACTGAT

151 GAGGCCAGCT CAGCCTGCAG CACAGACTGG GTCATCCCAG ATCCCGAAGA

201 GGAACCAGAG CGCAAGCGAA AGAAGGGCCC AGCCCCGAAG ATGCTGGGCC

251 ACGAGCTTTG CCGTGTCTGT GGGGACAAGG CCTCCGGCTT CCACTACAAC

301 GTGCTCAGCT GCGAAGGCTG CAAGGGCTTC TTCCGGCGCA GTGTGGTCCG

351 TGGTGGGGCC AGGCGCTATG CCTGCCGGGG TGGCGGAACC TGCCAGATGG

401 ACGCTTTCAT GCGGCGCAAG TGCCAGCAGT GCCGGCTGCG CAAGTGCAAG

451 GAGGCAGGGA TGAGGGAGCA GTGCGTCCTT TCTGAAGAAC AGATCCGGAA

501 GAAGAAGATT CGGAAACAAC AGCAGCAGGA GTCACAGTCA CAGTCGCAGT

551 CACCTGTGGG GCCGCAGGGC AGCAGCAGCT CAGCCTCTGG GCCTGGGGCT

601 TCCCCTGGTG GATCTGAGGC AGGCAGCCAG GGCTCCGGGG AAGGCGAGGG

651 TGTCCAGCTA ACAGCGGCTC AAGAACTAAT GATCCAGCAG TTGGTGGCGG

701 CCCAACTGCA GTGCAACAAA CGCTCCTTCT CCGACCAGCC CAAAGTCACG

751 CCCTGGCCCC TGGGCGCAGA CCCCCAGTCC CGAGATGCCC GCCAGCAACG

801 CTTTGCCCAC TTCACGGAGC TGGCCATCAT CTCAGTCCAG GAGATCGTGG

851 ACTTCGCTAA GCAAGTGCCT GGTTTCCTGC AGCTGGGCCG GGAGGACCAG

901 ATCGCCCTCC TGAAGGCATC CACTATCGAG ATCATGCTGC TAGAGACAGC

951 CAGGCGCTAC AACCACGAGA CAGAGTGTAT CACCTTCTTG AAGGACTTCA

1001 CCTACAGCAA GGACGACTTC CACCGTGCAG GCCTGCAGGT GGAGTTCATC

1051 AACCCCATCT TCGAGTTCTC GCGGGCCATG CGGCGGCTGG GCCTGGACGA

1101 CGCTGAGTAC GCCCTGCTCA TCGCCATCAA CATCTTCTCG GCCGACCGGC

1151 CCAACGTGCA GGAGCCGGGC CGCGTGGAGG CGTTGCAGCA GCCCTACGTG

1201 GAGGCGCTGC TGTCCTACAC GCGCATCAAG AGGCCGCAGG ACCAGCTGCG

1251 CTTCCCGCGC ATGCTCATGA AGCTGGTGAG CCTGCGCACG CTGAGCTCTG

1301 TGCACTCGGA GCAGGTCTTC GCCTTGCGGC TCCAGGACAA GAAGCTGCCG

1351 CCTCTGCTGT CGGAGATCTG GGACGTCCAC GAGTGA

Summary
Official Symbol NR1H2

Official Full Name nuclear receptor subfamily 1, group H, member 2


Primary source HGNC:7965
See related Ensembl:ENSG00000131408; HPRD:02660; MIM:600380
Gene type protein coding
RefSeq status VALIDATED
Organism Homo sapiens
Lineage Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as NER; UNR; LXRB; LXR-b; NER-I; RIP15; NR1H2
Summary The liver X receptors, LXRA (NR1H3; MIM 602423) and LXRB, form a subfamily of the nuclear receptor superfamily and are key regulators of macrophage function, controlling transcriptional programs involved in lipid homeostasis and inflammation. The inducible LXRA is highly expressed in liver, adrenal gland, intestine, adipose tissue, macrophages, lung, and kidney, whereas LXRB is ubiquitously expressed. Ligand-activated LXRs form obligate heterodimers with retinoid X receptors (RXRs; see MIM 180245) and regulate expression of target genes containing LXR response elements (summary by Korf et al., 2009 [PubMed 19436111]).[supplied by OMIM]

chromosome: 19; Location: 19q13.3-q13.3




Official Symbol NR1H3

Official Full Name nuclear receptor subfamily 1, group H, member 3


Primary source HGNC:7966
See related Ensembl:ENSG00000025434; HPRD:07211; MIM:602423
Gene type protein coding
RefSeq status VALIDATED
Organism Homo sapiens
Lineage Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as LXRA; LXR-a; RLD-1; NR1H3
Summary The liver X receptors, LXRA and LXRB (NR1H2; MIM 600380), form a subfamily of the nuclear receptor superfamily and are key regulators of macrophage function, controlling transcriptional programs involved in lipid homeostasis and inflammation. The inducible LXRA is highly expressed in liver, adrenal gland, intestine, adipose tissue, macrophages, lung, and kidney, whereas LXRB is ubiquitously expressed. Ligand-activated LXRs form obligate heterodimers with retinoid X receptors (RXRs; see MIM 180245) and regulate expression of target genes containing LXR response elements (summary by Korf et al., 2009 [PubMed 19436111]).[supplied by OMIM]




chromosome: 11; Location: 11p11.2

課程名稱 : 生物資訊分析課程
指導老師 : 鄧致剛 老師
系所 : 生醫所生理藥理組碩一
學號 : M9801315
學生姓名 : 李姿儀