閃躲是為了呈現真實不違背心

!!SEQUENCE_LIST 1.0
BLASTP 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= /export/users/stud02/gi-85362735.pep
(461 letters)

Database: sh
4 sequences; 1697 total letters

Searching.done

Score E
Sequences producing significant alignments: (bits) Value ..

gi-85362735.pep Begin: 52 End: 461
!gi|85362735|ref|NP_009052.3| oxysterols receptor... 610 e-178
gi-85362735.pep Begin: 37 End: 67
!gi|85362735|ref|NP_009052.3| oxysterols receptor...
gi-194294519.pep Begin: 47 End: 402
!gi|194294519|ref|NP_001123574.1| oxysterols rec... 446 e-129
gi-194294517.pep Begin: 92 End: 447
!gi|194294517|ref|NP_005684.2| oxysterols recept... 446 e-129
gi-194328806.pep Begin: 235 End: 387
!gi|194328806|ref|NP_001123573.1| oxysterols rec... 231 1e-64
gi-194328806.pep Begin: 92 End: 236
!gi|194328806|ref|NP_001123573.1| oxysterols rec...
\\End of List

>gi-85362735.pep gi|85362735|ref|NP_009052.3| oxysterols receptor LXR-beta [Homo
sapiens]
Length = 461

Score = 610 bits (1573), Expect = e-178
Identities = 321/410 (78%), Positives = 321/410 (78%)

Query: 52 ASSACSTDWVIPDXXXXXXXXXXXXXXXXMLGHELCRVCGDKASGFHYNVLSCEGCKGFF 111
ASSACSTDWVIPD MLGHELCRVCGDKASGFHYNVLSCEGCKGFF
Sbjct: 52 ASSACSTDWVIPDPEEEPERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFF 111

Query: 112 RRSVVXXXXXXXXXXXXXTCQMDAFMXXXXXXXXXXXXXEAGMREQCVLSEEQIRKKKIR 171
RRSVV TCQMDAFM EAGMREQCVLSEEQIRKKKIR
Sbjct: 112 RRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIR 171

Query: 172 KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAAQELMIQQL 231
K LTAAQELMIQQL
Sbjct: 172 KQQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQL 231

Query: 232 VAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPG 291
VAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPG
Sbjct: 232 VAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPG 291

Query: 292 FLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFIN 351
FLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFIN
Sbjct: 292 FLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFIN 351

Query: 352 PIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKR 411
PIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKR
Sbjct: 352 PIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKR 411

Query: 412 PQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 461
PQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
Sbjct: 412 PQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 461



Score = 20.0 bits (40), Expect = 0.60
Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 251 PWPLGADPQSRDARQQRFAHFTELAIISVQE 281
PWP G DP + A T+ I +E
Sbjct: 37 PWPGGPDPDVPGTDEASSACSTDWVIPDPEE 67


>gi-194294519.pep gi|194294519|ref|NP_001123574.1| oxysterols receptor LXR-alpha
isoform c [Homo s
Length = 402

Score = 446 bits (1146), Expect = e-129
Identities = 239/381 (62%), Positives = 272/381 (71%), Gaps = 25/381 (6%)

Query: 81 MLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVXXXXXXXXXXXXXTCQMDAFMXXX 140
MLG+ELC VCGDKASGFHYNVLSCEGCKGFFRRSV+ C MD +M
Sbjct: 47 MLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGH--CPMDTYMRRK 104

Query: 141 XXXXXXXXXXEAGMREQCVLSEEQIRKKKIRKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
+AGMRE+CVLSEEQIR KK+++
Sbjct: 105 CQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQ---- 160

Query: 201 XXXXXXXXXXXXXXXXXXXLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQS 260
L+ Q MI++LVAAQ QCN+RSFSD+ +VTPWP+ DP S
Sbjct: 161 -------------------LSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHS 201

Query: 261 RDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRY 320
R+ARQQRFAHFTELAI+SVQEIVDFAKQ+PGFLQL REDQIALLK S IE+MLLET+RRY
Sbjct: 202 REARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRY 261

Query: 321 NHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFS 380
N +E ITFLKDF+Y+++DF +AGLQVEFINPIFEFSRAM L L+DAE+ALLIAI+IFS
Sbjct: 262 NPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFS 321

Query: 381 ADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVF 440
ADRPNVQ+ +VE LQ YVEAL +Y I P D+L FPRMLMKLVSLRTLSSVHSEQVF
Sbjct: 322 ADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVF 381

Query: 441 ALRLQDKKLPPLLSEIWDVHE 461
ALRLQDKKLPPLLSEIWDVHE
Sbjct: 382 ALRLQDKKLPPLLSEIWDVHE 402


>gi-194294517.pep gi|194294517|ref|NP_005684.2| oxysterols receptor LXR-alpha isoform
a [Homo sapi
Length = 447

Score = 446 bits (1146), Expect = e-129
Identities = 239/381 (62%), Positives = 272/381 (71%), Gaps = 25/381 (6%)

Query: 81 MLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVXXXXXXXXXXXXXTCQMDAFMXXX 140
MLG+ELC VCGDKASGFHYNVLSCEGCKGFFRRSV+ C MD +M
Sbjct: 92 MLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGH--CPMDTYMRRK 149

Query: 141 XXXXXXXXXXEAGMREQCVLSEEQIRKKKIRKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
+AGMRE+CVLSEEQIR KK+++
Sbjct: 150 CQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQ---- 205

Query: 201 XXXXXXXXXXXXXXXXXXXLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQS 260
L+ Q MI++LVAAQ QCN+RSFSD+ +VTPWP+ DP S
Sbjct: 206 -------------------LSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHS 246

Query: 261 RDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRY 320
R+ARQQRFAHFTELAI+SVQEIVDFAKQ+PGFLQL REDQIALLK S IE+MLLET+RRY
Sbjct: 247 REARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRY 306

Query: 321 NHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFS 380
N +E ITFLKDF+Y+++DF +AGLQVEFINPIFEFSRAM L L+DAE+ALLIAI+IFS
Sbjct: 307 NPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFS 366

Query: 381 ADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVF 440
ADRPNVQ+ +VE LQ YVEAL +Y I P D+L FPRMLMKLVSLRTLSSVHSEQVF
Sbjct: 367 ADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVF 426

Query: 441 ALRLQDKKLPPLLSEIWDVHE 461
ALRLQDKKLPPLLSEIWDVHE
Sbjct: 427 ALRLQDKKLPPLLSEIWDVHE 447


>gi-194328806.pep gi|194328806|ref|NP_001123573.1| oxysterols receptor LXR-alpha
isoform b [Homo s
Length = 387

Score = 231 bits (589), Expect = 1e-64
Identities = 117/153 (76%), Positives = 133/153 (86%)

Query: 309 IEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDA 368
+ +MLLET+RRYN +E ITFLKDF+Y+++DF +AGLQVEFINPIFEFSRAM L L+DA
Sbjct: 235 VTVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDA 294

Query: 369 EYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSL 428
E+ALLIAI+IFSADRPNVQ+ +VE LQ YVEAL +Y I P D+L FPRMLMKLVSL
Sbjct: 295 EFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSL 354

Query: 429 RTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 461
RTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
Sbjct: 355 RTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE 387



Score = 118 bits (296), Expect = 1e-30
Identities = 72/170 (42%), Positives = 86/170 (50%), Gaps = 25/170 (14%)

Query: 81 MLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVXXXXXXXXXXXXXTCQMDAFMXXX 140
MLG+ELC VCGDKASGFHYNVLSCEGCKGFFRRSV+ C MD +M
Sbjct: 92 MLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGH--CPMDTYMRRK 149

Query: 141 XXXXXXXXXXEAGMREQCVLSEEQIRKKKIRKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
+AGMRE+CVLSEEQIR KK+++
Sbjct: 150 CQECRLRKCRQAGMREECVLSEEQIRLKKLKR-----------------------QEEEQ 186

Query: 201 XXXXXXXXXXXXXXXXXXXLTAAQELMIQQLVAAQLQCNKRSFSDQPKVT 250
L+ Q MI++LVAAQ QCN+RSFSD+ +VT
Sbjct: 187 AHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVT 236


Database: sh
Posted date: Jun 30, 2010 12:19 PM
Number of letters in database: 1697
Number of sequences in database: 4

Lambda K H
0.324 0.136 0.402

Gapped
Lambda K H
0.267 0.0410 0.140


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2001
Number of Sequences: 4
Number of extensions: 44
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 461
length of database: 1697
effective HSP length: 42
effective length of query: 419
effective length of database: 1529
effective search space: 640651
effective search space used: 640651
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 30 (16.9 bits)
S2: 30 (16.2 bits)

(Linear) MAP of: gi-194328805222-1385.seq check: 6999 from: 1 to: 1164

gi|194328805:222-1385 Homo sapiens nuclear receptor subfamily 1, group H, member
3 (NR1H3), transcript variant 2, mRNA

Using Enzyme data from: enzyme.dat FileCheck: 8449

Note that some entries in this file are prefixed by ;. These entries
have recognition sites which are very common and therefore by default
these entries are not included in the search (according to David Ghosh these
are entries for which N_PROB > 5.0e-04). If you wish your search
to include these entries, specify /ENZ=** (VMS) or -enz=** (UNIX) on
the command line of any of the mapping programs (MAP, MAPLOT, or . . .

With 9677 enzymes: *

June 30, 2010 00:10 ..

galR_CS
SS5-core-site |
CuSE_CS | |
AP-1-IL-3_(2) | | |
GCN4-HIS3.2| | | |
GCN4-ILV1.1| | | |
CNBP-SRE|| | | |
ADD1/SREBP_site_(2)|| | | |
T3R_TRE1_CS ||| | | |
GCRE | ||| | | |
GCN4-HIS | ||| | | |
GCN4-HIS3.5 | ||| | | |
GCN4-HIS4.1 | ||| | | |
GCN4-HIS4.2 | ||| | | |
malT_CS | ||| | | |
Bas1_RS | ||| | | |
Pu_box| | ||| | | |
histone_H4_CS.2 || | ||| | | |
malT-malPp | || | ||| | | |
MCBF_RS | | || | ||| | | |
abaA-consensus | | || | ||| | | |
Msn2_CS | | | || | ||| | | |
Msn4_CS | | | || | ||| | | |
GR-intron-site-2 | | | | || | ||| | | |
Sp1-gamma-globin_(3) | | | | || | ||| | | |
GC/FAR_site_(2) | | | | | || | ||| | | |
Sp1-gamma-globin_(3)| | | | | | || | ||| | | |
GR-MT-IIA betaP-F4 || | |Tec1_CS | | || | ||| | | |
| | || | | | | | || | ||| | | |
ATGTCCTTGTGGCTGGGGGCCCCTGTGCCTGACATTCCTCCTGACTCTGCGGTGGAGCTG
1 ---------+---------+---------+---------+---------+---------+ 60
TACAGGAACACCGACCCCCGGGGACACGGACTGTAAGGAGGACTGAGACGCCACCTCGAC

a M S L W L G A P V P D I P P D S A V E L -
b C P C G W G P L C L T F L L T L R W S C -
c V L V A G G P C A * H S S * L C G G A V -

Ets-1_CS
GAGA_box/CT_element
BPC1_CS
E2A_CS |
E2A-CAMLG |
MyoD_CS2 |
E2A_site_consensus| |
E2A_site_consensus || |
USF-APP || |
E2A_CS| || |
E2A-CAMLG| || |
AP-4-HIV-1| || |
Sp1-erk1_(1) || || |
Ets-1_CS Sp1-VGF_(1)| || || |
Ets_CS| AP-2_CS5 || || || |
PEA3_CS2| AP-2-Bfsp1 || || || |
Elk-1-CS||oct-B2-SV40 | || || || |
||| | | || || || |
TGGAAGCCAGGCGCACAGGATGCAAGCAGCCAGGCCCAGGGAGGCAGCAGCTGCATCCTC
61 ---------+---------+---------+---------+---------+---------+ 120
ACCTTCGGTCCGCGTGTCCTACGTTCGTCGGTCCGGGTCCCTCCGTCGTCGACGTAGGAG

a W K P G A Q D A S S Q A Q G G S S C I L -
b G S Q A H R M Q A A R P R E A A A A S S -
c E A R R T G C K Q P G P G R Q Q L H P Q -

Sp1-complement_factor_I
delta-rpL7|
APRT-CHO_US||
APRT-human_US||
Ets-1_CS EKLF_CS|||
PEA3-CAMLG| BKLF_CS|||
UASPHR_site| KLF15-CS|||
Elg_CS| CCAC-box||||
Erg_CS2| Sp1-YB1||||
PEA3_RS || Thy-1-FP-V|||||
PEA3_CS || CAC-bp-beta-globin-HS-3_(1) ||||||
Pu_box| || JCV_repeated_sequence| ||||||
Ets-1_CS| || PuF_RS| ||||||
F-2-alpha_CS| || betaE-F3| ||||||
PEA3_CS2|| || KKLF_CS|| ||||||
PU.1_CS|| || Ace2-mdscan-motif-2 Msn2_CS ||| ||||||
FSE2.1||| ||rSM22-alpha-TCE | Msn4_CS ||| ||||||
|||| || | | | ||| ||||||
AGAGAGGAAGCCAGGATGCCCCACTCTGCTGGGGGTACTGCAGGGGTGGGGCTGGAGGCT
121 ---------+---------+---------+---------+---------+---------+ 180
TCTCTCCTTCGGTCCTACGGGGTGAGACGACCCCCATGACGTCCCCACCCCGACCTCCGA

a R E E A R M P H S A G G T A G V G L E A -
b E R K P G C P T L L G V L Q G W G W R L -
c R G S Q D A P L C W G Y C R G G A G G C -

ASP-CYP21
Rap1p-broad-CS
RAP1_consensus |
Msn2_CS | |
TFIIIA_CS Msn4_CS | |
| | | |
GCAGAGCCCACAGCCCTGCTCACCAGGGCAGAGCCCCCTTCAGAACCCACAGAGATCCGT
181 ---------+---------+---------+---------+---------+---------+ 240
CGTCTCGGGTGTCGGGACGAGTGGTCCCGTCTCGGGGGAAGTCTTGGGTGTCTCTAGGCA

a A E P T A L L T R A E P P S E P T E I R -
b Q S P Q P C S P G Q S P L Q N P Q R S V -
c R A H S P A H Q G R A P F R T H R D P S -

Hac1_CS
EFII-RSV |
MIG1_consensus | |
Ace2-mdscan-motif-2 | | |
Mig1_CS | | | |
CuSE_CS| | | | |
AP-2_CS5 || | | | |
AP-2-cyclinD2_(1) || | | | |
Sp1-complement_factor_I | || | | | |
AP-2_CS5 | | || | | | |
AP-2-TBXAS1_(2) | | || | | | |
Swi5-mdscan-motif-1 | | || | | | |
Sp1-gamma-globin_(3) | | | || | | | |
Hxk2/Med8_CS | | | || | | | |
Msn2_CS | | | | || | | | |
Msn4_CS | | | | || | | | |
Dof4_CS | | | | | || | | | |
ECB_consensus | | | | | | || | | | |
CAP-box| | | | | | | || | | | |
HSV_IE_repeat|| | | | | | | || | | | |
Dof2_CS ||| | | | | | | || | | | |
Dof4_CS ||| | | | | | | || | | | |
_consensus | ||| | | | | | | || | |Pho4_CS |XRE_CS1
| | ||| | | | | | | || | | | | |
CCACAAAAGCGGAAAAAGGGGCCAGCCCCCAAAATGCTGGGGAACGAGCTATGCAGCGTG
241 ---------+---------+---------+---------+---------+---------+ 300
GGTGTTTTCGCCTTTTTCCCCGGTCGGGGGTTTTACGACCCCTTGCTCGATACGTCGCAC

a P Q K R K K G P A P K M L G N E L C S V -
b H K S G K R G Q P P K C W G T S Y A A C -
c T K A E K G A S P Q N A G E R A M Q R V -

GR/PR-connexin43
GR-uteroglobin.1 |
GR-uteroglobin.2 |
SOX_CS | |
galR_CS | |
DSXF-FBE/_A| | |
AP-2_beta_CS || | |
T-antigen_RS | || | |
AP-2_site | | || | |
AP-2_beta_CS | | || | | CTC-element-2
GR-intron-site-3 | | | || | | NFkB_CS1 |
| | | | || | | | |
TGTGGGGACAAGGCCTCGGGCTTCCACTACAATGTTCTGAGCTGCGAGGGCTGCAAGGGA
301 ---------+---------+---------+---------+---------+---------+ 360
ACACCCCTGTTCCGGAGCCCGAAGGTGATGTTACAAGACTCGACGCTCCCGACGTTCCCT

a C G D K A S G F H Y N V L S C E G C K G -
b V G T R P R A S T T M F * A A R A A R D -
c W G Q G L G L P L Q C S E L R G L Q G I -

CNBP-SRE E2A_site_consensus
ADD1/SREBP_site_(2) MRE_CS2 |
HSV_IE_repeat | MREc_(3) |
TonE_CS| | GAGA-eve_(6) | | CAC-binding-PBGD_(1)
F_consensus_(2) || | ARE MED-1| | | E2A_CS Pti4_CS |
| || | | || | | | | |
TTCTTCCGCCGCAGCGTCATCAAGGGAGCGCACTACATCTGCCACAGTGGCGGCCACTGC
361 ---------+---------+---------+---------+---------+---------+ 420
AAGAAGGCGGCGTCGCAGTAGTTCCCTCGCGTGATGTAGACGGTGTCACCGCCGGTGACG

a F F R R S V I K G A H Y I C H S G G H C -
b S S A A A S S R E R T T S A T V A A T A -
c L P P Q R H Q G S A L H L P Q W R P L P -

PUT2_UAS.2
PUT2_UAS2
MSE_consensus|
DRE/CRT_CS ||
GAL4_consensus | ||
MyoD-PRR-M-CAT | ||
OMP-undefined-site | | ||
lactoferrin_site| | | ||
AP-4/E1247-EGFR || | | ||
AP4/E1247-EGFR || | | ||
HNF-6-CS2 | || | | ||
| | || | | ||
CCCATGGACACCTACATGCGTCGCAAGTGCCAGGAGTGTCGGCTTCGCAAATGCCGTCAG
421 ---------+---------+---------+---------+---------+---------+ 480
GGGTACCTGTGGATGTACGCAGCGTTCACGGTCCTCACAGCCGAAGCGTTTACGGCAGTC

a P M D T Y M R R K C Q E C R L R K C R Q -
b P W T P T C V A S A R S V G F A N A V R -
c H G H L H A S Q V P G V S A S Q M P S G -

Sp1-TPI_(4)
glucagon-G3A |
GRE_CS7 | |
GR-uteroglobin.1 | | |
GR-uteroglobin.2 | | |
CAP-box | | | |
LVa-site| | | | |
LVa-Mo-MuLV| | | | |
GRE_CS8|| | | | |
GR/PR-connexin43|| | | | |
GR-intron-site-4 ||| | | | |
MyoD-PRR-M-CAT | ||| | | | |
GR-MT-IIA| | ||| | | | |
malT-malPp || | ||| | | | |
malT_CS | || | ||| | | | |
V_repeated_sequence| | || | ||| | | | |
Sp1-erk1_(1)| | || | ||| | | | |
RY3-CS| | || | ||| | | | |
MAZ_CS2| | || | ||| | | | |
-mdscan-motif-1 || | || | ||| | | | |
RY3-CS | || | || | ||| | | | |FlrC_RS_motif
| | || | || | ||| | | | | |
GCTGGCATGCGGGAGGAGTGTGTCCTGTCAGAAGAACAGATCCGCCTGAAGAAACTGAAG
481 ---------+---------+---------+---------+---------+---------+ 540
CGACCGTACGCCCTCCTCACACAGGACAGTCTTCTTGTCTAGGCGGACTTCTTTGACTTC

a A G M R E E C V L S E E Q I R L K K L K -
b L A C G R S V S C Q K N R S A * R N * S -
c W H A G G V C P V R R T D P P E E T E A -

GC_box
Sp1-XIST_(3)
Pu_box|
Ets-1_CS|
TCF-2-alpha_CS|
PEA3_RS||
PEA3_CS||
KLF15-CS||
EKLF_CS |||
PEA3-CAMLG | |||
UASPHR_site | |||
malT-malPp AP-2-apoE-site-2 | |||
LVa-site | MAF-consensus | | |||
LVa-Mo-MuLV | AP-2_beta_CS | | | |||
Pu_box | | AP-2_CS4| | | | |||
malT_CS| | | AP-2_CS4|| | | | |||
NFE4_site || | | MTVGRE_NRS ||| | | | |||
ISGF3_RS | || | | E1A-F_CS| ||| | | | |||SDR_RS
| | || | | || ||| | | | ||| |
CGGCAAGAGGAGGAACAGGCTCATGCCACATCCTTGCCCCCCAGGGCTTCCTCACCCCCC
541 ---------+---------+---------+---------+---------+---------+ 600
GCCGTTCTCCTCCTTGTCCGAGTACGGTGTAGGAACGGGGGGTCCCGAAGGAGTGGGGGG

a R Q E E E Q A H A T S L P P R A S S P P -
b G K R R N R L M P H P C P P G L P H P P -
c A R G G T G S C H I L A P Q G F L T P P -

inding-PBGD_(1) GABP-Slp_site Thy-1-FP-VI/VII
KKLF_CS | TFIIIA_CS |MRF4-E2 Ace2-mdscan-motif-2|
| | | | | ||
CAAATCCTGCCCCAGCTCAGCCCGGAACAACTGGGCATGATCGAGAAGCTCGTCGCTGCC
601 ---------+---------+---------+---------+---------+---------+ 660
GTTTAGGACGGGGTCGAGTCGGGCCTTGTTGACCCGTACTAGCTCTTCGAGCAGCGACGG

a Q I L P Q L S P E Q L G M I E K L V A A -
b K S C P S S A R N N W A * S R S S S L P -
c N P A P A Q P G T T G H D R E A R R C P -

CAP-box
MLTF-HMGCoAred |
GCRE | |
GCN4-HIS | |
GCN4-HIS3.5 | |
GCN4-HIS4.1 | |
GCN4-HIS4.2 | |
Bas1_RS | |
MMTV-F5 | | |
Pax6_CS2 | | | |
GCN4-HIS3.2 | | | | |
GCN4-ILV1.1 | | | | |
TFIIIA_CS | | | | | |
galR_CS TEA1_CS | | | | | | |
| | | | | | | | |
CAGCAACAGTGTAACCGGCGCTCCTTTTCTGACCGGCTTCGAGTCACGGTGATGCTTCTG
661 ---------+---------+---------+---------+---------+---------+ 720
GTCGTTGTCACATTGGCCGCGAGGAAAAGACTGGCCGAAGCTCAGTGCCACTACGAAGAC

a Q Q Q C N R R S F S D R L R V T V M L L -
b S N S V T G A P F L T G F E S R * C F W -
c A T V * P A L L F * P A S S H G D A S G -

ASS-TATA
OctT3-S6-2-CS
Myb-tom-1A_(1) |
H4TF-1hist | |
Pu_box | | |
PEA3_RS| | | |
PEA3_CS| | | |
PEA3-CAMLG || | | |
UASPHR_site || | | |
Gcr1_CS | || | | |
EcR-consensus_(2)| | || | | |
p300-consensus || | || | | |
| || | || | | |
GAGACATCTCGGAGGTACAACCCTGGGAGTGAGAGTATCACCTTCCTCAAGGATTTCAGT
721 ---------+---------+---------+---------+---------+---------+ 780
CTCTGTAGAGCCTCCATGTTGGGACCCTCACTCTCATAGTGGAAGGAGTTCCTAAAGTCA

a E T S R R Y N P G S E S I T F L K D F S -
b R H L G G T T L G V R V S P S S R I S V -
c D I S E V Q P W E * E Y H L P Q G F Q L -

Brn-2_dimer_CS
ASS-TATA core-promoter-motif-7 |
yb-cyclinD2 | AP-4/E1247-EGFR | |
IRF-2_RS| | AP4/E1247-EGFR | | YY1_CS
|| | | | | |
TATAACCGGGAAGACTTTGCCAAAGCAGGGCTGCAAGTGGAATTCATCAACCCCATCTTC
781 ---------+---------+---------+---------+---------+---------+ 840
ATATTGGCCCTTCTGAAACGGTTTCGTCCCGACGTTCACCTTAAGTAGTTGGGGTAGAAG

a Y N R E D F A K A G L Q V E F I N P I F -
b I T G K T L P K Q G C K W N S S T P S S -
c * P G R L C Q S R A A S G I H Q P H L R -

H2A_conserved_US
MMTV-F5 histone_CAP_box EBV-ZRE2
Xbp1_CS2 prolactin-D4| EBV-ZRE7 |
| || | |
GAGTTCTCCAGGGCCATGAATGAGCTGCAACTCAATGATGCCGAGTTTGCCTTGCTCATT
841 ---------+---------+---------+---------+---------+---------+ 900
CTCAAGAGGTCCCGGTACTTACTCGACGTTGAGTTACTACGGCTCAAACGGAACGAGTAA

a E F S R A M N E L Q L N D A E F A L L I -
b S S P G P * M S C N S M M P S L P C S L -
c V L Q G H E * A A T Q * C R V C L A H C -

ACE2_site
Ttk69-eve |
Swi5-mdscan-motif-1 | |
Z_box_(Zta) PHO4_consensus | | |
NF-E1.3 | CuSE_CS HRE_CS | | | |
| | | | | | | |
GCTATCAGCATCTTCTCTGCAGACCGGCCCAACGTGCAGGACCAGCTCCAGGTAGAGAGG
901 ---------+---------+---------+---------+---------+---------+ 960
CGATAGTCGTAGAAGAGACGTCTGGCCGGGTTGCACGTCCTGGTCGAGGTCCATCTCTCC

a A I S I F S A D R P N V Q D Q L Q V E R -
b L S A S S L Q T G P T C R T S S R * R G -
c Y Q H L L C R P A Q R A G P A P G R E A -

GH2
galR_CS DRE/CRT_CS
NRE_Box1_CS vs-1-core | RY3-CS HC3 RC1/RC2-CYC |
| | | | | | |
CTGCAGCACACATATGTGGAAGCCCTGCATGCCTACGTCTCCATCCACCATCCCCATGAC
961 ---------+---------+---------+---------+---------+---------+ 1020
GACGTCGTGTGTATACACCTTCGGGACGTACGGATGCAGAGGTAGGTGGTAGGGGTACTG

a L Q H T Y V E A L H A Y V S I H H P H D -
b C S T H M W K P C M P T S P S T I P M T -
c A A H I C G S P A C L R L H P P S P * P -

MEF3_CS
MIZ-1a_CS |
histone_H4_CS.2 | |
AntP_CS | | |
EcR-consensus_(2) | | | |
STE12_site | | | | |
BAS2_site | | | | | |
EBNA2-response-element | | | | | | |
TRF_RS | | | | | Crz1p_CS | | |
| | | | | | | | | |
CGACTGATGTTCCCACGGATGCTAATGAAACTGGTGAGCCTCCGGACCCTGAGCAGCGTC
1021 ---------+---------+---------+---------+---------+---------+ 1080
GCTGACTACAAGGGTGCCTACGATTACTTTGACCACTCGGAGGCCTGGGACTCGTCGCAG

a R L M F P R M L M K L V S L R T L S S V -
b D * C S H G C * * N W * A S G P * A A S -
c T D V P T D A N E T G E P P D P E Q R P -

MLC1f/MLC3f-IR
HNF-5_site |
HNF-5_CS | |
HNF-3-EGFR | |
HNF-3-rEGFR | |
HBV_TGT3_site | | | Sp1-YB1
AP-4/E1247-EGFR| | | | Tbx20-Isl1 |
AP4/E1247-EGFR| | | | MED-1| |
GCN4-ILV1.2 || | | | GR-MT-IIA || |
zeste-white || | | | Dof2_CS || |
| || | | | | || |
CACTCAGAGCAAGTGTTTGCACTGCGTCTGCAGGACAAAAAGCTCCCACCGCTGCTCTCT
1081 ---------+---------+---------+---------+---------+---------+ 1140
GTGAGTCTCGTTCACAAACGTGACGCAGACGTCCTGTTTTTCGAGGGTGGCGACGAGAGA

a H S E Q V F A L R L Q D K K L P P L L S -
b T Q S K C L H C V C R T K S S H R C S L -
c L R A S V C T A S A G Q K A P T A A L * -

E1A-F_CS
CNRE-CS-core |H2A_conserved_US
MSP_CS | | histone_CAP_box
| | | |
GAGATCTGGGATGTGCACGAATGA
1141 ---------+---------+---- 1164
CTCTAGACCCTACACGTGCTTACT

a E I W D V H E * -
b R S G M C T N -
c D L G C A R M -

Enzymes that do cut:

GCRE LVa-site MRE_CS2 NFkB_CS1 FSE2.1 GH2 APRT-CHO_US APRT-human_US
MLC1f/MLC3f-IR HC3 AP-2_CS4 PEA3_RS XRE_CS1 MTVGRE_NRS NF-E1.3
PUT2_UAS.2 PUT2_UAS2 RC1/RC2-CYC GRE_CS8 GCN4-HIS3.2 GCN4-HIS GCN4-HIS3.5
GCN4-HIS4.1 GCN4-HIS4.2 H4TF-1hist MLTF-HMGCoAred GCN4-ILV1.1 GCN4-ILV1.2
GR-MT-IIA LVa-Mo-MuLV EFII-RSV oct-B2-SV40 GR-uteroglobin.1 GR-uteroglobin.2
malT_CS MSP_CS malT-malPp histone_H4_CS.2 H2A_conserved_US JCV_repeated_sequence
zeste-white Pu_box AP-2_CS5 NRE_Box1_CS SDR_RS HSV_IE_repeat GRE_CS7
E1A-F_CS E2A_CS Ets-1_CS HNF-5_CS ISGF3_RS MCBF_RS PEA3_CS PuF_RS
TCF-2-alpha_CS HBV_TGT3_site glucagon-G3A AntP_CS T-antigen_RS TFIIIA_CS
TRF_RS CAP-box histone_CAP_box YY1_CS CNBP-SRE HNF-5_site NFE4_site
EBV-ZRE7 EBV-ZRE2 betaP-F4 betaE-F3 prolactin-D4 MREc_(3) GR-intron-site-2
GR-intron-site-3 GR-intron-site-4 MMTV-F5 CAC-bp-beta-globin-HS-3_(1)
CAC-binding-PBGD_(1) Ttk69-eve GAGA-eve_(6) Sp1-TPI_(4) Thy-1-FP-V Thy-1-FP-VI/VII
ASS-TATA EcR-consensus_(2) DSXF-FBE/_A Elk-1-CS OMP-undefined-site abaA-consensus
delta-rpL7 p300-consensus MAF-consensus Sp1-gamma-globin_(3) AP-2_site
CCAC-box CTC-element-2 E2A_site_consensus EBNA2-response-element Ets_CS
GAGA_box/CT_element GC_box lactoferrin_site GABP-Slp_site ADD1/SREBP_site_(2)
Z_box_(Zta) ASP-CYP21 TEA1_CS ARE AP-2_beta_CS TonE_CS Sp1-YB1
GR/PR-connexin43 Sp1-XIST_(3) AP-1-IL-3_(2) Myb-tom-1A_(1) Sp1-VGF_(1)
HNF-3-EGFR AP-4/E1247-EGFR AP-2-cyclinD2_(1) v-Myb-cyclinD2 HNF-3-rEGFR
AP4/E1247-EGFR AP-2-Bfsp1 PEA3-CAMLG E2A-CAMLG USF-APP AP-2-TBXAS1_(2)
Sp1-complement_factor_I Sp1-erk1_(1) ACE2_site BAS2_site GC/FAR_site_(2)
GAL4_consensus HSTF_consensus_(2) MIG1_consensus MSE_consensus PHO4_consensus
RAP1_consensus STE12_site UASPHR_site ECB_consensus T3R_TRE1_CS KKLF_CS
rSM22-alpha-TCE DRE/CRT_CS HNF-6-CS2 AP-2-apoE-site-2 Brn-2_dimer_CS Ace2-mdscan-motif-2
Swi5-mdscan-motif-1 RY3-CS MRF4-E2 IRF-2_RS SOX_CS EKLF_CS BKLF_CS
Crz1p_CS Elg_CS Erg_CS2 PEA3_CS2 core-promoter-motif-7 MEF3_CS Bas1_RS
Gcr1_CS Hac1_CS Msn2_CS Msn4_CS Tec1_CS CuSE_CS Xbp1_CS2 Mig1_CS
Hxk2/Med8_CS Pho4_CS MyoD-PRR-M-CAT Pax6_CS2 Dof2_CS Dof4_CS CNRE-CS-core
galR_CS Rap1p-broad-CS Pti4_CS HRE_CS MED-1 FlrC_RS_motif MIZ-1a_CS
BPC1_CS OctT3-S6-2-CS vs-1-core MAZ_CS2 MyoD_CS2 PU.1_CS SS5-core-site
KLF15-CS AP-4-HIV-1 Tbx20-Isl1

Enzymes that do not cut:

UAS(G)-pMH100 TFIIIC-Xls-5S.1 HSE_CS_inverted_repeat ZDNA_CS GCN4-his3-189
Ad5_EIA_element_I Ad5_EIA_element_II BPV-E2_CS1 Alb_DEI Alb_DEII Alb_DEIII
Alb_PEI BPV-E2_CS2 CACA dc_box GALV_E Pit-1_CS1 MuLV_GRBS SV40-GTI
SV40-GTII H2KBI H4siteII HCMV2 HCMV-DR1 HIV-kB HSVIE HSV-alpha-element
HSV-a'-IE-element CTF/CP1-CTF-0 mu-E1 mu-E3_(1) Ig_cd Ig_core Ig_dc
Ig_pd NF-kB-mIg-kappa LVb_RS MEP-1-MREd NFI_CS1 NFI_CS2 NFI_CS3
NFkB-k3 NFkB-PRDII kappa-E3 OCTA1.1 OCTA-mutant-8 OCTA-mutant-10 E-box_CS
OCTA3 PEBP2_RS PEA1-polyoma PE-a PE-b PRL_conserved_motif prolactin_USI
prolactin_USII SCMV-IE94-series_III AP-1-SV40 SV40-SPHII SV40-core Sp1_CS1
SRE.1 TAATGARAT TFIIIC-Xls-5S.2 TGGCA_RS alpha-TIF_CS beta-globin-CACCC-box
beta-IFN_CS cAMP_RE dGHF1_(1) GR-MMTV-IIA oriP_CS pGHF1_(1) polII_term
topoI_RS tMT-B_MREa EF-C_CS1 EFII_RS EFI-RSV-1 c-fos_SRE_half-site c-fos_SRE_1
TATA-box.2 CAAT-box.1 aP2-FSE2 MLTF-Ad-MLP FSE1 AP-2_CS1 AP-2_CS2 AP3-SV40
AP-4_CS CP1-MLP CP2-gamma-FBG NFI-NFI HNF-1_CS GRE_CS2 URS2 EivF/CRE_CS
ADH2_UAS1 XlHbox1-F1 CUP1-UASc EF-1-alpha-globin Octa1.4 Octa2.2 BGP1_RS1
HNF-1_CS2 NP_CS B1_CS B2_RS TyBF_RS GRE_CS5 ICSBP_CS cI-Op72a
MCE-DSE14 C/EBP_CS1 Amy-1_LIVa CK-1 CK-2 ERE_CS1 RIPE MHCemb-BSe
CK-8-mer TATA-box.1 Nod_box G-box GH0 GH1 JCV-GH-wt IR_(1)
EIIaE_site_B EIIaE_site_A topoII_CS his3-Tr-TATA NF-MHCIIA_RS NF-MHCIIB_RS
AP-1_CS1 CRE.2 NFI_CS4 Sp1_CS2 E2F_CS.1 AP3-IL2-siteI C/EBP-mTf AP5-SV40
EF-C.2 E2A_US E4TF1_CS EIIaE-T1 ABF1_CS engrailed_CS eve_RS1 b2-somatostatin
Lymphokine_CS COUP-ovalbuminS1 EGFR_site_2 MHCII_CS-A MHCII_CS-B MT/G-box
MRE_CS3 IL2-B-site A-alpha-Y_box E-alpha_Y_box E-alpha_X_box E-alpha_H_box
ISRE_CS ARS_CS dc_box.2 ApoCIIIp1 ApoCIIIp2 ApoCIII_NE ApoCIIId cytomeg18
cytomeg19 AP-2_CS3 PRDI_(1) huIFN-PRDII NRDI ATF_CS1 TCR-beta_decamer
Ap1-E3 Ap1-SV AP1-Col HIS-wt HIS168 GH-CSE1 GH-CSE2 GH-TRE
CYP1-UAS0 UAS1A UAS0 UAS1B Slp-FPI Slp-FPII Slp-FPIIpa Slp-FPIII
Slp-FPIIIa Slp-FPIIIb Slp-FPIV SP-A SP-B SP-C SP-D NFI-HBV-SP
SP-E CDEI CDEIII CEN6 APRT_US APRT-mouse_US CYC7-H2 MLC1f/MLC3f-DR
IgHuE1 IgHuE2 IgHuE3 Nir_box GAGA_CS HIG1_HE2 IL2R-alpha_US human_Sal_box_CS
CArG_box_CS HN1 HN2 HN3 HN4 HN5 LN1 LN2
LN3 LN4 LN5 HC1 HC2 HC4 HC5 LC1
LC2 LC3 LC4 LF-A2_RS1 rPrl-site-1P-A rPrl.B HAP1_RS NFI.1
Lam_B2_US ApoE_SRE ApoE_B1 ApoE_B2 ApoE_A CDF1_RS C/EBP_CS2 C/EBP-TTRS2
C/EBP-TTRS3 C/EBP-AT-Site-A C/EBP-AT-Site-C.1 C/EBP-AT-Site-C.2 C/EBP-SV40-1
C/EBP-DEI.1 C/EBP-DEI.2 C/EBP-SV C/EBP-MSV-1 C/EBP-PY IEF1(E3)_RS NFkB_CS2
NFkB-HIV-1.2 NFkB-b2m NFkB-HIgk NF-kB-class_I_MHC NFkB-hIL2Ra NFI.2
NFI.3 NFI.4 NFI.5 NFI.6 NFI-cmycII1 NFI-cmycII2 NFI.7 NFI.8
NFI.9 NFI-wt NFI.10 NFI.11 NFI.12 NFI.13 NFI.14 NFI.15
NFI.16 NFI-CSLa1,1 NFI.17 CTF NFI-tkII NFI.18 CRE-Ga Ga-URE
IL2_CS LysHREI LysHREII LysHREIII LysHREIV LysHREV LysHREVI LF-A1_RS1
LF-A2_RS2 LF-B1_RS LF-B2_RS LF-C_RS UBP1_RS EBP1_RS GRF1_RS CabE_PRE
c-GC-box SP1-IE3/34 SP1-SV3/5 SP1-DHFR.1 SP1-IE3/1 SP1-IE3/2 SP1-TK/2 SP1-SV/2
SP1-SV/4 SP1-SV/6 SP1-SV/1 SP1-TK/1 E4-160R.O E4-45R.D ITRN63.O ETFA-E2
AAVN.160.O AAVN.170.D AAVN.210.D PEPCK-80.D ETFA.2 ETFA.3 GCF2-EGFR
ETF_RS2 TfPRI TfPRII TfDRI TfCR Ad_DPS Ad_DPS.2 alpha-2-STE6.1
alpha-2-synRS.1 alpha-2-synRS.2 alpha-2-BAR1 alpha-2-STE2 alpha-2-MFa1
alpha-2-ha-2-MFa2 alpha-2-CS globin-wt-G-string OR(1) beta-glob-CACCC
HNF-1_RS A2vit_RE1 A2vit_RE2 A2vit_RE3 AP2-SV40.0 AP2-Hmt2a1 AP2-Hmt2a2
AP2-Hmt2a3 AP2-HgH1 AP2-HgH2 AP2-Hcmyc1 AP2-Hcmyc2 AP2-BPV.1 AP2-BPV.2
AP2-H2Kb1 Ap2-H2Kb2 AP2-H2Kb3 beta/epsilon-GATA.2 rho-promoter-GATA beta-H-GATA
alpha-D-GATA pi-GATA alpha-A-GATA.1 alpha-A-GATA.2 alpha-A-GATA.3 PEA1_RS
PEA2_RS PEB1_RS EF-C_RS XRE_CS2 XRE-1 XRE-2 EivF_CS ICS_(1)
ICS-H2Ld ICS-H2Kb ICS-H2Dd ICS-b2m ICS-HLADR ICS-HLAA3 ICS-MTII ICS-FacB
ICS-ISG15 ICS-ISG54 ICS-6-16 ICS-os ICSbf_CS APF-alb1 APF-alb2 APF-alb3
APF-alb4 APF-alb5 APF-alb6 APF-AFP1 APF-AFP2 APF-AFP3 APF-AT APF-FIB1
APF-FIB2 APF-PK APF-HG APF_CS EBP1_RS.2 COUP-ovalbumin COUP-VLDL
UAS1.3 UAS1.1 UAS1.2 TFIID-EIIa UCE.1 UCE.3 rRNA_UScor E3I_RS
E3II_RS E3III_RS E3IV_RS HLAII.Xbox HLAII.Ybox NFBK.1 NFBK.2 NFBK.3
NFBK.4 NFBK.5 NFBK.6 NFBK.7 NFBK_CS NFIII-Ad2 NFIII-Ad4 NFIII-SA7
NFIII-Ad12 NFIII-Ad40 NFIII-Ad41 HNFI-alpha-Fib HNFI-beta-Fib HNF1-alpha-1-AT
UAS2UP1 NF-Y_CS alpha-1-AT-X-Hapt alpha-1-AT-X-core alpha-1-AT-X-RBP
NFY-E-alpha TRE-col TRE-stromelysin TRE-hMTIIA TRE-polyoma.1 TRE-polyoma.2
AP1-IL2 AP-1_CS2 NF-E1_CS1 NF-E1.1 NF-E1.2 NF-E1.9 NF-E1.4 NF-E1.5
NF-E1.6 NF-E1.7 NF-E1.8 IL2R-alpha-kB XY_CS.1 XY_CS.2 CArG_CS CArG-hcact
CArG-fos_(1) CArG-xcact CArG-csact CArG-hsact CArG-hs1 CArG-hs2 CArG-hs3
CArG-hc1 CArG-hb1 SkA-SRE1 CArG-sc1 CArG-fos_(2) S1_HS CRE-fos CRE-PE
CRE-VIP CRE-som ENKCRE-1_(1) UASt HNF1_RS MRE_CS5 ADH2.1 ADH2.2
CREB-Som CREB-fos CREB-proenkephalin CREB-hsp70 CREB-TH CREB-FN CREB-PEPCK
CREB-VIP CREB-PTH CREB-ACG CREB-E2A CREB-E3 CREB-E4 CREB-HTLV-II CREB-BLV
CREB-CMV CREB-IAP CREB_CS1 CuE1.1 CuE2.1 CuE3.1 CuE4.1 CuE1.2
CuE3.2 CuE4.2 CuE2.2 CuE3.3 IgPE2_RS CuE4.3 CuE2.3 CuE1.3
CuE3.4_(1) TEF1-SphI TEF1-SphII TEF1-GTIIC TEF1-GTI* TEF1-Pywt TEF1-PyEC9
TEF2-GT-I ERE.cvitII GRE.cvitII DRE.cvitII beta-pol_CS beta-pol_RS PUT2_UAS.1
uEBP-E_CS HSV/AT HSV-IE110(3)-TAATGARAT HSV-IE110(2)-TAATGARAT HSV-IE110(1)-TAATGARAT
HSV-IE175(2)-TAATGARAT HSV-IE175(1)-TAATGARAT AT-alpha-27.1 AT-alpha-27.2
AT-alpha-47.1 AT-alpha-47.2 AT-alpha-47.3 AT-SV40 AT-MSV AT-SR_CS AT-beta-INF
AT-hsp AT-LC AT-E1A AT-tk AT-beta-globin AT-Alu CBAR eve_CS1
eve_CS2 PUT2_UAS1 STE2.1 STE2.2 STE6.1 STE6.2 BAR1.1 BAR1.2
MFa1.1 MFa1.2 MFa2.1 MFa2.2 MAT-alpha-2_CS1 MAT-alpha-2_CS2 MAT-OCTA1
MAT-OCTA2 HO/-411 HO/-736 MAT-alpha-1_RS MATa1/alpha-2CS a-actin_US actin_5c_US
(SRF)-actin Ad2MLP-UE_(US.1) Ad2MLP_US.2 Ad2MLP_US.3 Ad2MLP_US.4 Ad2MLP_US.5
Adh_US1 Adh_US2 Adh_US3 Adh_US4 Adh1_US2 Adh1-A Adh2_US Albumin_US1
NFI-albumin Albumin_US2 Albumin_US3 adip-P2_US1 BPV_En.1 AP2-BPV.3 NFI_CS5
AP1-col.3 CYC1-region-A HAP1-CYC1 RC2-CYC1.1 RC1a/RC2-CYC RC2-CYC1.2 CYC7_US1
CYC7_US2 Sp1-DHFR.2 Sp1-DHFR.3 E1a.1 E1a.2 E2E1a E2F-E1a EIIaE-CaEI
EIIaE-CbEI EIIaE-T1.2 EIIa-EF/EP EIIaE-BEII (E2)-EIIaE1 E2F-EIIaE1_(1)
EIIaE-AEII E2F-EIIaE1_(2) EIIF-EIIaE1 EIIaE1_US EIIaE1.2 Ga/CRFEII GaEII-late
USF-IIEII Sp1/CRF-EII Sp1-EII-lat E4F1-E4 E4F1-E4.1 EF-1-alpha/TEF1_US1
EF-1-alpha/TEF2_US1 SCR-indf-c-fos f-EBP-fos c-fos_SRE_2 c-fos.5 c-fos_US5
c-fos.1 c-fos.2 c-fos.3 c-fos.4 GAL4-depGAL GAL4-GAL1-1.3 GAL4-GAL1-1.2
GAL4-GAL1-1 GAL4-GAL1-1.4 GAL1-TATA GAL4-depGA GAL2_US2 GAL4-GAL2.1 GAL4-GAL7.1
GAL4-GAL7.4 GAL4-GAL7.5 GAL4-GAL80 CTF/NF-1a aD-globin-CS2 aD-globin-B
aD-globin-A beta-globin-CACCC CTF/NF-1b bA-globin.1 bA-globin.2 bA-globin.4
GH-site_2 GH-site_3 AP2-GH.1 AP2-GH.2 hGH-site-II GHF-1-GH-site_2a GHF-1-GH-site_1
GR-hGH_(1) T3rec-GH GC2-GH-CS Pit-1-pGHF1 HBVE-UE3 HBVE-UE2 HBVE-UE1 HBVE-E_site
GCN4-HIS3.1 GCN4-HIS3.3 GCN4-HIS3.4 HIS4_RS GCN4-HIS4.3 GCN4-HIS4.4 histone-H2B-US
OBF-histone OBF-H2B1 (TFIID/TBP)-H2B1 B-factor-H3_(1) histone_H4.1 HiNF-Ahist
histone_H4.2 B-factor-H3_(2) Sp1-HIV-1.1 Sp1-HIV-1.2 Sp1-HIV-1.3 HMGCoAred_FP1
HMGCoAred_FP2.1 HMGCoAred_FP3 HMGCoAred_FP5 HMGCoAred_FP6 SBF-E-HML SBF-B-HMR
SBF-E-HMR HSTF-hsp70.1 HSTF-hsp70.2 HAP-hsp70 HSTF-hsp70.3 HSTF-hsp70.4
HSTF-hsp70.5 HSTF-hsp70.6 HSTF-hsp70.7 HSTF-hsp70.8 TAB-hsp70 B-factor-hsp70
heat-indf-hsp70 HSTF-hsp70.9 HSTF-hsp70.10 CTF/CBF-hsp70 hsp70.4 hsp70_US
hsp70.5 Sp1-hsp70 hsp70.2 (TFIID/TBF)-RS HAP-hsp83 TAB-hsp83 HTLV-pa-BS.3
HTLV-pA-BS.1 HTLV-pA-BS.2 NFI-IE1.1 NFI-IE1.2 NFI-IE1.3 NFI-IE1.4 IE1-I
IE1.2 IE1.1 NFI-IE1.5 alpha-4_RS1 alpha-4_RS2.1 Sp1-IE-3.1 Sp1-IE-3.2
Sp1-IE-3.3 Sp1-IE-3.4 Sp1-IE-3.5 Sp1-IE-4/5 Sp1-IE-4/5.2 GCN4-ILV1.3 GCN4-ILV2
IgNF-A-IgH_(1) IgHC.1 NF-A1-IgHC NF-A2-IgHC IgHC.2 NFuE1-IgHC IgHC.20
IgPE-1-IgH IgHC.4 NFuE3/GTII IgHC.8 IgNF-A-IgH_(2) IgPE-2-IgH IgHC.11
IgHC.12 IgHC.13 IgHC.14 IgHC.15 IgPE-3-IgH IgHC.16 IgHC.21 IgHC.17
IgHC.18 IgHC.19 NFkB-IgkLC IgNF-A-Igk NF-A1-IgkLc NF-A2-IgkLc IgkLC-1
unknown-insulin rInsulin-flat-element INS_US.1 R2-b-IFN.1 R1-b-IFN ITF-b-IFN
60k-protein_RS1 60k-protein_RS2 IgPE-2-LPV-wt GR-lysozym.1 PR-lysozym GR-lysozym.2-1
PR-lysozym.2-1 GR-lysozym.3 lysozyme-TATA GAL4-MEL1 Sp1-MT-I.1 MT-I.1
(Sp1)-MT-I.1 MT-I.2 (Sp1)-MT-I.2 MT-I.3 MT-I.4 MT-I.5 MT-I.6
AP2-MT-II.1 AP2-MT-II.2 MT-IIA-BLE-1 AP2-MT-II.3 AP1-MT-II PRTF-MFa1 dirF/MATa1.1
PRTF/MATa1.2 PRTF/MATa1.3 MHCI/H2K AP2-MHCI KBF1-MHCI MHCI/H2K.2 Bfactor-MH
x-box-bp-MHCII DQ-beta-US1 KBF1-beta2-microglobulin MMTV-NF-I_RS GR-MMTV.01
GR-MMTV.02 GR-MMTV.03 GR-MMTV.1 GR/PR-MMTV.2 GR/PR-MMTV.3 GR/PR-MMTV.4
GR/PR-MMTV.5 GR-MMTV.04 GR-MMTV.05 GR-MMTV.06 GR-MMTV.07 NFI-MMTV GR-MMTV.08
GR-MMTV.09 GR-MMTV NFI-Mo-MuLV.2 LVb-Mo-MuLV Mo-MuLV NFI-Mo-MuLV.1 (GR)-Mo-MuLV
c-mos_DS1 c-mos_DS2 c-mos_DS3 IgPE-1-MSV C/EBP-MSV-2 AP2-c-myc.1 AP2-c-myc.2
COUP-ovalbuminS2 UAS-PGK_RS Py-alpha.1 PEA-2-poly PEA2-polyoma PEB1-polyoma
polyoma.4 polyoma.3 polyoma.2 T-Ag-Py.1 C/EBP-polyoma GT-IIc-Py-wt EF-C-polyoma
T-Ag-Py.2 T-Ag-Py.3 T-Ag-Py.4 T-Ag-Py.5 T-Ag-Py.6 rPRL-FPIV rPRL-FPIII
rPRL-FPII rPRL-FPI PUF-1-prolactin qa-1F-qa-2.1 qa-1F-qa-2.2 qa-1F-qa-2.3
qa-1F-qa-4.1 qa-1F-qa-4.2 qa-1F-qa-3.1 qa-1F-qa-3.2 qa-1F-qa-3.3 qa-1F-qa-y.1
qa-1F-qa-y.2 qa-1F-qa-y.3 qa-1F-qa-1.1 qa-1F-qa-1.2 Sp1-ras1.1 Sp1-ras1.2
Sp1-ras1.3 Sp1-ras1.4 Sp1-ras1.5 Sp1-ras GT-I-rbcS-.1 GT-I-rbcS-.2 GT-I-rbcS-.3
GT-I-rbcS-.4 TUF_CS1 TUF_RS TUF-RP/RP5.1 TUF-RP/RP5.2 TUF-RP/S33 EFI-RSV-2
CRE-somatostatin PRTF/MATa1.4 HBsAG-US LSF-SV40 Sp1-SV40.2 Sp1-SV40.3 Sp1-SV40.4
Sp1-SV40.1 AP1-SV40.1 SV40.1 AP1-SV40.2 SV40.2 OBF-SV40.1 SV40.3
SV40.4 SV40.5 SV40.6 SV40.16 TRE-SV40 SV40.7 OBF-SV40.2 SV40.8
oct-B1A-SV40 oct-B1B-SV40 oct-B3-SV40 SV40.9 AP2-SV40.1 AP2-SV40.2 SV40.10
AP2-SV40.3 SV40.12 C/EBP-SV40-2 SV40.13 AP3-SV40.1 AP3-SV40.2 SV40.14
GT-IIC-SV40 SV40.15 GT-IIBa-SV40 GT-IIBb-SV40 GT-IIA-SV40 Sp1-tk.1 CTF/NF-I-t
Sp1-tk.2 tryp-oxy_GRE.1 tryp-oxy_GRE.2 TAT-distal-GRE TAT-prox-GRE U1BsnRNA
U2snRNA.1 Sp1-U2snR.1 (Sp1)-U2snR.2 (Sp1)-U2snR.3 Octa-U2snRNA OBF-U2snRNA
U5snRNA U5snRNA.2 PR-uteroglobin-1 PR-uterogl.2 PR-uterogl.3 PR-uterogl.4
PR-uteroglobin-2 GR/PR-uteroglobin.1 PR-uterogl.6 PR-uterogl.7 vaccinia-early-US
ER-c-vit vitellogenin.1 WAP_US1 WAP_US2 WAP_US3 WAP_US4 WAP_US5 WAP_US6
CuE1.4 kappa-E2.1 CuE3.4_(2) CuE5 E1A_element_II E1A_element_I.1
ATF_RS E3-binding_site_IV E3-binding_site_III CREB-E3.2 FSE2 GAPD_initiation_site
ADH_US2 HP1-syn0 AAT_USFP AAT_US3 E2_RS1 E2_RS2 ovotransferrin_S_element_1
ovotransferrin_S_element_2 XRE-cyt450_RS CytR-galO(E) CytR-deoP-2 SRF_CS1
GAL4_CS3 galE_operator_CS cuticle-gene-US reductase_US1 EARLY-SEQ1 SP1_CS3
HSP/LSP_CS biosynthetic_repeated_sequence beta-A_globin_B'_site vit-B1_ERE
CAP/CRP-gal Ad-conserved-sequence-a Ad-conserved-sequence-e CAP/CRP_CS1
CAP/CRP-lac CAP/CRP_CS2 CAP/CRP_CS3 CAP/CRP_CS4 CAP/CRP-lac_site_1 CAP/CRP_CS5
Amy-2A_conserved_seq araC_CS Arg_box_CS CAR_US1 chorion_upstream_CS Gld_YYRR_sequence
HO_site leu2_US alpha-factor_stim_element alpha1/alpha2_element_CS SOD-1-GC-hexamer
TTR_inverted_repeat Tg-DRE AP1-transferrin_receptor b-alpha1-tubulin_US
tufB_wt_promoter MFA1_alpha-2_element C4-(G)18CGGGTGG CACA-pseudobeta-2
copia_HSE1 HSE_CS copia_HSE2 HSE-hsp23 HLA_DQ-beta_US H-2Kb-sequence-VII
H-2Kb-sequence-V-repeat H-2Kb-sequence-IV H2B-CCAAT H2B-specific_CS H1_conserved_US
H1-box histone_H4_CS HO_CS H1-TATA ICP4_CS IEmRNA-4/5_US IEmRNA-4/5_start
IEmRNA-4/5_DS IgH-heptamer cd_element_CS Ig-kappa.1 dc_element_CS Ig-kappa.2
pd_element_CS Ig-dc.2 Ins-IEF1 INF.1 TGGCA_CS1 lysozyme_E-0.2kb MRE_CS6
hMTIIa-GRE MRE_CS4 MRE_CS7 sigma-54-glnAp2 nitrogen_regulatory_CS ntrC_CS
nif_promoter_CS1 nif_promoter_CS2 NR(I)_CS nodulin_consensus_A RS_RNA_5'_CS
RS_initiation_site mouse_Sal_box_CS T3-box 16S/32S_rRNA.1 UAS(rpg)_CS
RPG-box U4B-octa LexA_CS1 LexA_CS2 GRE_CS4 RUG1 GR-lysozyme-1 GR-lysozyme-2
PR-ovalbumin ER-cvit RUG2 SV40-late-US1 HSV-tk-2nd_distal_signal Sp1-TK-dsII
(Sp1)-TK.2 HSV-tk-1st_distal_signal uteroglobin_HS-2.4_CS Sindbis_subgenomic_promoter
satDNA.1 ERE_CS vit-ERE vit-p17-ERE vaccinia-term-sequence vaccinia_F10_DS
oli1_DS yeast-termination-CS1 yeast.term.2 lambda-boxA_(1) lambda-boxA_CS
lambda.c retroviral_TATA 28S_RNA_termination_CS rRNA-T2/T3 yeast-termination-CS2
rDNA_spacer_CS lambda.d EBV.IR1_US1 E2_RS.1 E2_RS.2 E2_RS.3 E2_RS.4
E2_RS.5 E2_RS.6 E2_RS.7 E2_RS.8 E2_RS.9 E2_RS.10 E2_RS.11 E2_RS.12
E2_RS.13 E2_RS.14 E2_RS.15 E2_RS.16 E2_RS.17 HMGCoAred_FP4 GAL2_US1 GAL10_US1
GAL10_US2 GAL10_US3 GAL1_US1 GAL7_US1 GAL7_US2 GAL7_US3 MEL1 GAL80_US1
GAL4_CS1 GAL4_CS2 E2F-myc E2F-Ad5-E2a E2F-Ad5-E1a.1 E2F-Ad5-E1a.2 E2F-Ad12-E1a
E2F_CS.2 HSE-hsp70 E4F1_CS E4F1-E4.2 E4F1-E4.3 E4F1-E4.4 E4F1-E4.5 E4F1-E1A.1
E4F1-E1a.2 E4F1-E1a.3 E4F1-E2 E4F1-E3 GR-MTV-I GR-HMT-IIaI GR-RUG-I GR-RUG-II
GR-MRib GR-RUG-III GR-MTV-IIA GR-DSC7 GR-CLYS-I GR-CLYS-II GR-rTAT-I
GR-rTAT-II GR-hGH-I GR-CVIT-II GR-rTO-I GR-rTO-II GR-MSV-I GR-MSV-II GR-MSV-III
GR-COV-I GR-HMTIIa-II GRE_CS1 Adf-1-Adh Adf-1-AntpP1 DBF-1-ddc DBF-1-Ubx
dFRA-hmtIIA dJRA-hmtIIA DTF-1_RS1 DTF-1_RS2 GAGA-Ubx GAGA-en HSE-pHT5
zeste-Ubx AbdB-r_RS1 AbdB-r_RS2 Antp-Ubx bicoid-hb engrailed_RS eve_RS2
eve_RS3 ftz-Ubx ftz_RS1 paired_RS1 Ubx-Ubx zen_RS1 CP1_CS CP2_CS
CP1-MLP.2 NF-I_CS GRE_CS3 ERE_CS2 EcRE TR-TRE1 GRE(-) nGRE.1
nGRE.2 nGRE.3 nGRE.4 nGRE.5 nGRE.6 nGRE.7 PLF_US1 nGRE.8
nGRE.9 GR-MMTV.10 GR-MMTV.11 GR-MMTV.12 GR-MMTV.13 GR-MoMSV.1 GR-MoMSV.2
GR-MoMSV.3 GR-MuRFV.1 GR-MuRFV.2 GR-MuRFV.3 GR-G/A-FLV.1 GR-G/A-FLV.2 GR-G/A-FLV.3
GR-visna.1 GR-visna.2 GR-visna.3 GR-visna.4 GR-HuEnRV4-1.1 GR-HuEnRV4-1.2
GR-HuEnRV14-1.1 GR-MuEnRV14-1.2 GR-HIV1.1 GR-ARV-2.1 EIIaE-A EIIaE-T2
EIIaE-B' EIIaE-B EIIaE-C aD-globin-US GC2-GH-NCS IE1-II IE1-III IE1-IV
IE1-V IE1-VI IE1-VII IE1-VIII IE1-IX R2-b-IFN.2 GR-lysozym.2-2
PR-lysozym.2-2 IgPE-1-Py IgPE-2-LPVmut1 IgPE-2-LPVmut2 IgPE-2-LPVmut3 IgPE-2-LPVmut4
GT-IIc-Py-EC9.1 IgkLC-2 MREd_(1) MREc_(1) T-Ag-SV40-I T-Ag-SV40-II T-Ag-SV40-III
GAL4-GAL2.2 GAL4-GAL7.2 GAL4-GAL7.3 GAL2_ds MHC-CRE CArG-MCK AP2-MCK
kappa-MCK MEF1-MCK A-rich-MCK NTF-1-I NTF-1-II NTF-1-IIIa NTF-1-IIIb NTF-1-IV
hCuE1 C/EBP-RS C/EBP-RSV C/EBP-RSV.2 c-Myc_RS1 GLI_RS Hepta APRE
deltaE1_(1) deltaE2 deltaE3 deltaE4_(1) deltaE5 deltaE6_(1) deltaE7
myc-PCF_CS MLTF_RS NF-AT-IL-2 mu-E5 NFAT-HIV.1 NFAT-HIV.2 CREB-HTLVI.1
CREB-HTLVI.2 CREB-HTLVI.3 CYP21B_US AP1-col_wt AP1-col_syn AP1-osteocalcin
AP1-histoneH3.2 AP-1_CS3 TRE.2 TRE.1 AP1-HIV DFSE2 DGALVEN TRE-cjun.1
TRE-cjun.2 TRE-GPEI.1 TRE-GPEI.2 TRE-EBV-ZRE AP1-SCC AP1-cfos AP1-TRE-2/T
AP1-TRE-1/C AP1-TRE0/C AP1-TRE-4/T AP1-TRE+4/C AP1-TRE+4/A AP1-TRE-1/T
AP1-TRE0/A AP1-TRE-4/G AP1-TRE-4/C AP1-aP2 AP1-GALV AP1-PBGD NF-E2_CS
AP1-IL3 AP1-ET-I AP1-HPV16 AP1-HPV16-fp4e1 AP1-HPV16-fp9e AP1-JE AP1-TGF-beta1.1
AP1-TGF-beta1.2 AP1-HIV.1 AP1-HIV.2 AP1-HIV.3 AP1-HIV.4 AP1-TGF-beta TRE-Egr-1.1
TRE-Egr-1.2 TRE-Py MLTF-L-PK MLTF-chymotrypsin MLTF-fibrinogen MLTF-hGH
MLTF-pB48 MLTF-HHO MLTF-mMT-I MLTF-TFIIIA MLTF-mMT1 MLTF-L-PK.2 MLTF-HCMV
MLTF-Ad2IVa2 MLTF-AAVP5 MLTF-TS MLTF-hU1snRNA MLTF-H5 MLTF-hGH.2 NFkB-HCMV-18R
NFkB-MHCclassII NFkB-IL2 NFkB-HIV-pol NFkB-MHCclassI NFkB-TNF-alpha NFkB-TNFaCK1
NFkB-TNFa-K.1 NFkB-TNFa-K.2 NFkB-TNFa-K.3 NFkB-IL6 NFkB-MHC-I.2 NFkB-HCMV-AP18
NFkB_CS3 NFkB_CS4 NF-kB-APRE mu-B.1 mu-B.2 PU-MHC_II_I-Ab E1A_element_I.2
element_II_rs-2 element_II_rs-3 element_II_rs-4 Xl_g-actin_SRE galE-O(E)
galE-O(I) HSP_TS LSP_TS CRP-galO CRP-lac-1 CRP-lac-2 CRP-gal-1 CRP-gal-2
CRP-gal-3 CRP-ara-1 CRP-ara-2 CRP-ara-3 CRP-ara-4 CRP-ara-5 XRE-2.2 Elastase_II_CS
AraC-araO(1) ICP4-gD ICP4-pBR-1 ICP4-pBR-2 TGGCA-BS1a TGGCA-BS1b TGGCA-BS2
GR-hGH_(2) NR(I)-glnA-1 NR(I)-glnA-2 NR(I)-glnA-3 NR(I)-glnA-4 NR(I)-glnA-5
element_II-rs-1 TATA-box-CS CAAT-box.2 GC-box enhancer_core_(1) AP-3_RS
GT-IIB/Pvu_box globin-3'_conserved_sequence fos-BLE-2 SIS-RE IFN-inducible_CS
VRE(IFN-alpha)-repA VRE(IFN-beta)-NE VRE(IFN-alpha)-repB NRE_Box2_CS Lysozyme-N-0.25
Myc-CF1_RS GRE_CS6 TSE TIE_(1) SV40_Pu-box HIV-NRF_RS fPyF9_Box-DNA_CS
Ad-Enh.3 HSV_late_TATA_box hAFP_box_I LF-A1_RS2 tf-LF1_CS LF-B1_CS alpha-1-AT-B
C/EBP-TTR-2 C/EBP-TTR-3 C/EBP-alpha-1-AT-A C/EBP-alpha-1-AT-C C/EBP-SV40_core-C
C/EBP-Albumin-DE-I C/EBP-Gene_248(1) C/EBP-SCD1 LTF-E-Hep.B-E Alb-PE
Pancreatic_CS UCR_core mu-E4 kappa-E2.2 SCD1/BP_RS Myc-PRF_RS Anteriory_Pituitary_ES
NF-E1_CS2 IEB1 bicoid_RS bicoid_CS HSTF_CS1 PEA1_CS AP-4_RS Hox-1.3_RS
TR-TRE2 GCN4_CS1 GCN4_CS2 HSTF_CS2 RAP1-HMRE MAT-alpha-2_CS3 MAT-alpha-2_CS4
P-Box-alpha-CS P-Box-a-CS Q_Box_CS qa-1F_CS1 RAP1-TEF2 AABS_CS1 AABS_CS2
ABRE E6_element_(1) HIV_URE-1 HIV_URE-2 HNF1-HP1 HSTF_CS3 NF-IL6_RS
KROX24_CS KROX24-F GR-IL6 IL2-dOct PhyA-response_element RAD_CS XIB-SV40
Y_box_(1) hAFP_box_2 IEB2 NF-IL2-A_RS E4TF1-E4 E4TF3-E4.1 E4TF3-E4.2
E4TF3-E4.3 E4TF3-E4.4 GT-rice GT-rice/oat GT-oat GT-pea NFkB-TCR-beta
NFkB-IL2Ra.1 NFkB-IL2Ra.2 NFkB-MHCI-H2Kb.1 NFkB-MHCI-H2Kb.2 NFkB-MHCI-H2Kb.3
NFkB-IC-li NFkB-GMCSF NFkB-TNF-alpha.1 NFkB-TNF-alpha.2 NFkB-LT.1 NFkB-LT.2
NFkB-LT.3 NFkB-LT.4 NFkB-APRE NFkB-vimentin RF-X_RS bicoid_wt_RS bicoid_mutant_2
bicoid_mutant_5 Antp_wt_RS bicoid-antp-18 bicoid-antp-21 bicoid-antp-25
bicoid_mut_9 bicoid_mut_10 bicoid_mut_11 bicoid_mut_12 bicoid_mut_13 bicoid_mut_14
Antp_wt_RS.2 Antp_mut_20 Antp_mut_24 bicoid-X1 bicoid-X2 bicoid-X3 bicoid-A1
bicoid-A2 HNF-4_CS HNF-4-TTR HNF-4-HNF4P HNF-4-HNF4D HNF-4-apoCIII HNF-4-alpha1-AT
Pit-1_CS2 Pit-1-PlPPal Pit-1-PitB1 Pit-1-PitB2 Pit-1-pGH Pit-1-dGH Pit-1-P3D
Pit-1-P1P Pit-1-P1D Pit-1-P3P Pit-1-P2D Pit-1-P2P Pit-1-P4P Pit-1-P4D Pit-1-PRL-1
TFIID-MLP TFIID-CYC1-1 TFIID-CYC1-2 TFIID-LEU2-1 TFIID-LEU2-2 TFIID-CYC1/MLP
TFIID-SV40/MLP glass-Rh1 NF-1-IE94.23 NF-1-IE94.22 NF-1-IE94.21 NF-1-IE94.20
NF-1-IE94.19 NF-1-IE94.18 NF-1-IE94.17 NF-1-IE94.16 NF-1-IE94.15 NF-1-IE94.14
NF-1-IE94.13 NF-1-IE94.12 NF-1-IE94.11 NF-1-IE94.10 NF-1-IE94.9 NF-1-IE94.8
NF-1-IE94.7 NF-1-IE94.6 NF-1-IE94.5 NF-1-IE94.4 NF-1-IE94.3 NF-1-IE94.2
NF-1-IE94.1 FTZ-F1_RS FTZ-F1_RS2 junB-US1 junB-US2 junB-US3 ftz-CON ftz_CS2
Ubx-dpp GAGA-kruppel.1 GAGA-kruppel.2 GAGA-kruppel.3 GAGA-kruppel.4 GAGA-kruppel.5
GAGA-kruppel.6 VETF-VGF1 c-Myb-F3-L c-Myb-F3-H c-Myb-F5L c-Myb-F5-H c-Myb-F1-L-1
c-Myb-F1-L-2 c-Myb-F1-L-3 c-Myb-F1-H c-Myb-F4-H c-Myb-F4-L ILF-HIV.1 ILF-HIV.2
lambda-boxA_(2) 21-boxAr lambda-Al 21-boxAl rrn-boxA beta-casein-FP1 beta-casein-FP2
EF-1A-site_A EF-1A_CS IHF-L1 IHF-L2 EBP-80-enh2-up EBP-80-enh2 UAS(G)-pSV3
XylR-UBS1 XylR-UBS2 XylR_CS1 XylR_CS2 XylR_CS3 TetR-O1 TetR-O2 MetJ-16mer
MetJ-MetF MetJ-MetC MetJ_RS Ner_operator_IS NifA-UAS3 MerR-mer_promoter
OmpR-ompC-a OmpR-ompC-bc AlgR1-algD_US1 AlgR1-algD_US2 ArgR-carAB_arg-box-1
ArgR-carAB_arg-box-2 BlaI-P(p)1 BlaI-P(p)2 BlaI-P(i) deoR-deoO(E) deoR-deoO(1)
deoR-deoO(2) FNR_CS MalT_CS MalT-malE(2ek) MalT-malE(1ek) MomR/OxyR_CS
MomR/OxyR-mom RafR-rafO(1) RafR-rafO(2) SBS-1A SBS-1B GSG_element_(1)
Oct-2-A Oct-2-B Oct-2-C Oct-2-D alpha1(I)-collagen-FP1 alpha1(I)-collagen-FP2
beta-RARE Myogenin_CS (Myogenin)_CS Ucp-DNAseI-HS4-CRE MHC_class_I_silencer
MHC_class_I_enhancer silencer_binding_site_1 silencer_binding_site_2 rPOMC_DE-4
rPOMC_DE-3 rPOMC_DE-2 rPOMC_DE-1 rPOMC_CE-2 rPOMC_CE-1 rPOMC_PE-4 rPOMC_PE-3
rPOMC_PE-2 rPOMC_PE-1 MCK-kE2 RAP1-HIS4 MLC(1/3)-MRE GATA-1-GATA-1 PGK-1-GC_box1
PGK-1-US PGK-1-NF1-like_US PGK-1-CCAAT PGK1-GC-box2 X_box_(1) Y_box_(2)
alpha-actin-CaSRE3 Evi-1_CS gERE C/EBP-cVITII Sp1-cVITII TF-V-beta-cVITII
USF-cVITII c-fos_SRE_3 ARGRII-CAR1 ARGRII-CAR2 ARGRII-ARG5/ARG6 ARGRII-ARG3
ICE1 Pcp-2-rat-NSE_sequence EMF-1-M1 EHSE URS-SSA1 Prl-1P HCMV_MIE_conserved_sequence
HCMV_MIE_FP1 HCMV_MIE_FP2 EBV_BamHI-C_conserved_sequence c-Myc_RS2 cell-cycle-responsive_UAS
eve-stripe2-kr6 eve-stripe2-kr5 eve-stripe2-bcd5 eve-stripe2-gt3 eve-stripe2-bcd4
eve-stripe2-gt2 eve-stripe2-bcd3 eve-stripe2-bcd2 eve-stripe2-gt1 eve-stripe2-bcd1/kr3
eve-stripe2-hb3 eve-stripe2-kr2 eve-stripe2-hb2 eve-stripe2-kr1 eve-stripe2-hb1
TFII-I-TdT-Inr TFII-I-ML-Inr1 TFII-I-ML-Inr2 TFII-I-HIV-1-Inr1 TFII-I-HIV-1-Inr2
YY1-P5 YY1-TdT YY1-LeIF-J HNF-1-alpha-C_site HNF-1-alpha-B2-site HNF-1-alpha-B1-site
HNF-1-alpha-A-site MuLV-GRE Inr_(1) Mut.Inr MyoD-MCK-right_site MyoD-MCK-left_site
UCR-MHC-I H-2RIIBP-region-II H-2RIIBP-vit-B-1 H-2RIIBP/T3R-alpha-region-II
H-2RIIBP/T3R-alpha-vit-B-1 V-beta-CRE NBRE HF-1 VL30-VLX VL30-VLY
CP1-alpha-globin CP1-H-2K(b) CP1-HSP70 CP1-UAS2UP1-CYC1 CP1-MSV-LTR CP1-MOPC-41-V(k)
CP1-beta-globin CP1-tk GAS_(1) SDRE_(1) AhR-XRE1 3MC-inducible-GST-Ya_site
HNF1-GSTYa HNF4-GSTYa NLS-GSTYa AAF_RS AhR_RS AGIE-BP1_RS ANF_RS
AP-1_CS4 AP-3_CS AR_CS ARP-1_RS ATF_CS2 BGP1_RS2 BSAP_CS CBF_RS
CBP-1_CS CD28RC_RS COUP_RS DBP_RS E2BP_CS E2F_CS E4F_RS E4TF1_RS
EF-1A_RS EGR-1_CS EGR-2_RS ELP_RS v-ErbA_RS ETF_RS3 F-ACT1_RS GAF_RS
GR_CS H1TF1_RS H1TF2_RS H2RIIBP-vitERE H4TF1_RS H4TF2_CS H-APF-1_RS
HiNF-A_RS HNF-3_CS IAF_RS Ig/EBP1_CS IREBF-1_RS ISGF1_RS ISGF2_RS Ker1_RS
LBP_RS LIT-1_RS LSF_CS LSF_RS MBF-1_RS MBF-I_CS MEF-2_CS MR_CS
mtTF1_RS MyoD_RS NFI_CS6 NFI_CS7 NF-AT_RS NF-D_RS NF-GMa_CS NF-GMb_CS
NFkB_CS5 NF-uE3_RS NF-S_CS NF-W1/W2_RS NGFI-B_RS NRF-1_CS NTF_RS Oct-R_CS
Pax-1_RS myc-PRF_RS PR_CS PRDI-BF1_RS PTF_RS Pu.1_RS RAR_RS RFX_RS
RVF_RS SEF-1_RS SIF_core_RS Sp1_CS4 TIN-1-PGK-1 TR_RS TTF-1_CS USF_CS
VBP_RS XF1/XF2_RS XPF-1_RS YB-1_LY-box E2F/DRTF-1_class_I E2F/DRTF-1_class_II
E2F/DRTF-1_class_III SCB MBF-TMP1-beta MBF-TMP1-alpha NF-I-adenovirus
IEF1-IEB1 HTF4-HIV-E-box-I MGF_CS MGF-beta-casein glucagon-G3 glucagon-G3B
Ad_DE1 Ad_DE2 TGA1a-as-1 TGA1b-hex1 CF2-I_RS CF2-II-s15 Ets-1-T-alpha-2_(1)
eve-stripe2-bcd-1 PER3 PER2 PER1 PRE-TAT NF-AT-IL-2.2 KTF-1_CS
keratinocyte_CS PTF-1-amylase.1 PTF-1-amylase.2 GArC1 GArC3 COUP-POMC
lambda-P(r)_start_site SIF-wt_RS CyIIIa-P1.1 CyIIIa-P1.2 CyIIIa-P2I CyIIIa-P2II
CyIIIa-P3A.1 CyIIIa-P3A.2 CyIIIa-P3A.3 CyIIIa-P3B CyIIIa-P4 CyIIIa-P5 CyIIIa-P7I
CyIIIa-P7II HNF-3-TTR_(1) P1_CS P2I_CS P2II_CS P2II_CS2 P3A_CS
P3B_CS P4_CS P5_CS P7I_CS P7II_CS p53-RGC-1 p53-772-C(BE) p53_CS
p53_RS ABF-1_CS AP-1_CS ATF_CS beta-actin-intron-SRE C/EBP_CS CAC-BP_CS
CATT-BP_RS1 CATT-BP_RS2 CREB_CS2 EBP-1_RS EF-C_CS2 FIS_CS GAL4_CS GT-2A_RS
GT-2B_RS H4TF-2_RS HAP-1_RS1 HAP-1_RS2 HNP-1_CS IBP-1_CS IBP-1_CS2 KBF-1_CS
LOB_RS MAT-alpha1_RS MRE-BP_CS NF-1_CS GATA-1_CS2 NF-kB_CS NF-mu-E1_CS
OBP_RS OTF-1_RS OTF-2A_RS PEA-2_RS RAF_RS SRF_CS2 TopoI_RS TopoII_RS
TUF_CS2 XRE-BP_RS AluA GAGA-E74A.1 GAGA-E74A.2 GAGA-E74A.3 GAGA-E74A.4
p53-human-gadd45 p53-hamster-gadd45 alpha(1)-I3-GME TAT-GME c-Myb-HIV
HIV-2-PuB1 HIV-2-PuB2 Ets-1-T-alpha-2_(2) Initiator_CS PO-B_binding_site
enhancer_core_(2) Sph-Box ATF_CS4 PEA3_site_CS RPG-alpha_site mu-E3_(2)
c-Myc_binding_site myc-TCE_(1) TIE_(2) c-Myc_P2_promoter_site GSG_element_(2)
MHC_class_I_enhancer_site ISRE/VRE/PRDI_CS2 URE_(1) ETS2_S/S2_site ETS2_H2_site
U2/U6_proximal_element Polyoma_fPyF9 N-ras_NRE FIRE RARE_CS CRBPE/RXRE
TSE/TRE VDRE_CS_(1) IRE-A_(1) HNF-1_site ATBF1-AFP C/EBP-HBV_Box-beta
C/EBP-Gene_248(2) Albumin_D_Site HBVI-FPV GABP_site HNF-3_site LFA1_site
ANF_site MTF1-MRE IL-1_response_element alpha(1)-gene_element-I kappa-E2_CS1
NFAT_site class_II_gene_X_CS IA-beta-X IA-alpha-X IE-alpha-X IE-beta-X
IA-beta-X' GM-CSF_promoter_site pyr_factor_site IEF1-IEB MGF_site KRE2
KRF1_site PVF_site Topo_II_cleavage_site_CS MDBP_site ISRE_(1) ISRE_(2)
ISRE_(3) PPE as-1 ARIIp ARIIb CARG_box Adh-p1_(1) pF
pD C/EBP-LTR.1 C/EBP-LTR.2 C/EBP-LTR.3 Adf-1-P1-C Adf-1-P1-B Adf-1-P1-A-1
FSE2.2 NF-1-e RI ZIA/ZIB ZIC ZID/ZII HCG-URE CIIS1
UAS2_(1) UAS2_(2) UAS2_(3) DRE CYP1A1-BTE GBF-B3-DG17 GBF-B4 DHFR-5'-UTR.1
Sp1-human-beta-polymerase CREB-beta-polymerase beta-polymerase-site_C1
beta-polymerase-site_E_(1) EBV-ZRE6 EBV-ZRE5 EBV-ZRE4/TGTG2 EBV-ZRE3/TGTG1
EBV-ZRE1 CArG-1 En-k1 En-k2 Eve-k3 UAS1_(1) ERE-vit-A2 Eve-site_e5_(1)
beta28 IR_(2) CRE_(1) C/EBP-LTR(1) alpha-globin-CCAAT_site TO-CACCC-box
CACCC_site_2 betaE-F4 EKLF-gamma-globin GSTYa-XRE GPHalpha-GRE1 GPHalpha-CRE
GPHalpha-GRE2 GPHalpha-GRE3 GPE1 dGHF-1 pGHF-1 dGHF1_(2) pGHF1_(2)
IL-6RE_(1) HBV-NF-1c HBV-EP NF-1b AP-1-site_E NF-1a Sp1-LTR.1 HSE_(1)
HSP70A-HSE hsp70-CAAT CP1-SRE HSE2_(1) 21bpI 21bpII 21bpIII EF-C_site_(1)
ATF_site ISRE_(4) OCTA_(1) ACCC-containing_site hORE-X NF-kappaE1_site
RIPE3a1 bINF-PRDI_(2) ISG15-ISRE_(3) ISRE_(6) ISG54-ISRE_(2) UAS-L
UAS-L2 MREd_(2) MREd_(3) MREc_(2) BLE-1 IRS_(1) ICS_(2) v-Myb-site_C
v-Myb-site_B v-Myb-site_A GRE_(1) UBR ML1 C/EBP-LTR(2) c-Ets-1-LTR
MBTE OTC-site_B_(2) OTC-site_C_(1) OTC-site_D_(2) c-fos-ERE_(2) UAS_(1)
CRE_(3) PEBP2_site NF-1-junction PBGD-CACCC-site ENKCRE-1_(2) ENKCRE-2
c-Fos-nGRE C/EBP-LTR(3) IES1 IES2 somatostatin-CRE.1 unknown-CRE.2
AP-1-P.1 AP-1-P.2 TCR-NF-alpha1 deltaE1_(2) deltaE4_(2) deltaE6_(2) transferrin-site_III
transferrin-site_IV CTF-CR TRE-pal TH-FSE DSE_(1) PSE_(1) c-Fos-CRE
CAP-CRE HIV-TMF-site AF-1-k-apoB C/EBP-k SDRE_(2) DP3 Oct-1_site_(1)
Oct-2_site_(1) Oct-2_site_(2) Oct-1_site_(2) lysozyme-site_e_(1) lysozyme-site_f_(1)
lysozyme-site_g_(1) NCAM-HBS-I NCAM-HBS-II NF-1-MMTV PEPCK-CRE-1 C/EBP-B
PEPCK-site_C_(2) C/EBP-D(1) C/EBP-E(1) Sp1-site_C USF-B GATA-1-site_A
TD5 TD4 kappaB-pd RBE UASd OV-330 OV-280 OV-250
OV-220 OV-150 gamma-globin-distal-CCAAT theta-globin-GC-I CCAAT_site_2
betaP-F1 betaE-F5 ADH-site_d8_(1) ADH-site_d8_(2) ADH-site_d7_(1) ADH-site_d7_(2)
ADH-site_d6_(1) ADH-site_d6_(2) ADH-site_d5(o) ADH-site_d5(m) ADH-site_d4_(1)
ADH-site_d4_(2) ADH-site_d3_(1) ADH-site_d3_(2) ADH-site_d2_(1) ADH-site_d2_(2)
ADH-d1 ADH-site_d0_(1) ADH-site_d0_(2) ADH-p8_(1) ADH-p8_(2) ADH-p7_(1)
ADH-p7_(2) ADH-p6(m) ADH-p6(o) ADH-p4(o) ADH-p5(m) ADH-p3_(1) ADH-p3_(2)
ADH-p2b ADH-p2 ADH-p2a ADH-p2alpha_(1) ADH-p2alpha_(2) ADH-p0_(1) ADH-p1_(2)
ADH-p0_(2) E1A-BS20/21 E1A-BS19 E1A-BS15 E1A-BS13 E1A-BS9 E1A-BS10 E1A-BS7
E1A-BS6 E1A-BS5 E1A-BS4 E1A-BS3 E1A-BS2 E1A-BS1a E1A-BS1b MREa
PE-2 GRE_(2) C/EBP_site_II C/EBP_site_Ib GHF2 rGH-GHF7 his3-GG1-Q-element
M-CAT Ad2-ML-Inr1_(1) Inr1_(2) TG23 CM-1 BCD1 BCD6 enII
NRE-A GST-Ya-EpRE Ftz_binding_site betaE1_(1) betaE2_(1) betaE3_(1)
betaE4 betaE6 betaE7 GA1_(1) GA1_(2) FUSE CRE-BP1-CCAAT2 CCAAT1
SAA3-PR-II TPO-enhancer_site_3 TPO-TTF-1_site TPO-enhancer_site_1 TPO-enhancer_site_2
Kr4-eve-2-D2 hb3_(1) kr3 BS2-18 BS1-26 BSX-18 TT2 T0
TT0 TT4 H0 HH2 HH4 HH6 HT5 HT6
CON fRE2 fRE3 fDE2 COL1A1-B2 AP-1-NRE kr1 hb3_(2)
hb2 hb1 hb8 hb7 hb6 hb5 hb4 K1
K2 Df6 Cf1 Bf2 Uf3 Uf7 Uf8 Uf9
Uf10 SC SB SA HB-1 alpha-1-PI-site-j TGT3-apoB
LyF-1-muB GC-II insulin-NRE IUF1-CT-II CT-I alpha-MHC_TRE2 CRE_(4)
SDI-A2 MB7 MB4 MB1 prolactin-D10 prolactin-D9 prolactin-D8
prolactin-D7 prolactin-D6 prolactin-D5 prolactin-D3 prolactin-D2 prolactin-D1
GR1/GR2 eve-e5 eve-site_e4 RRE-DR P12.B P12.A CPE OXBOX
GFAP-GFIII GFAP-GFII GFAP-GFI IF2-FP2 E6_element_(2) AABS GBP-ISRE
TnI-IRE DSE_(2) PSE_(2) HPV-fp2u albumin-site-eG albumin-site-eH Su'x'
Su1 Su2 Su3 Su'y' Su'z' n-ras-NRE OL-1 PL-1
PL-2 OL-2 beta-globin-CCAAT_site_3 CSS_(1) CSS_(2) HNF4D CCRU
GAS_(2) C/EBP-intron_site X2_(1) X2_(2) RIPE3a2 C/EBP-A(1) C/EBP-A(2)
C/EBP-E(2) C/EBP-D(2) hemopexin-IL-6RE IVa2-Inr TNF-RE opsin-RET1 unknown-site_II
transferrin-TATA ApoB-GRE PGK1-GC-box PGK1-CCAAT-box erythropoietin-site_B
erythropoietin-site_D hEpo-HRE TR2RE-EPO ADH2-C/EBP-A ADH-site_F_(1) ADH-site_F_(2)
ADH3-C/EBP-E ADH-site_G_(1) ADH-site_D_(4) ADH-site_C_(3) ADH-site_B_(5)
ADH-site_A_(4) ADH-site_A_(5) ADH-site_A_(6) ADH-site_F_(3) ADH-site_E_(2)
ADH-site_D_(5) ADH-site_C_(4) ADH-site_B_(6) ADH-C/EBP-A(4) ADH1-C/EBP-A
C/EBP-ADH1-A HB3 HB4 HB5 HB6 HB7/HB8/HB9/HB10 ERE_(3)
ISRE_(9) CArG ISRE_(10) IR-site_D IR-site_C IR-Site_B IR-site_A_(2)
IR-site_E IR-site_D_(2) IR-site_C_(2) IR-site_B IR-site_A GRFE HNF-1-F
GPIIb-site_E GPIIb-site_D HNF-1-C GPIIb-site_B C/EBP-A(7) Sp1-B NF-1-B
C/EBP-A(8) DE-2 POMC-PE-1 HSTF-UASx1 MGF-FP1 unknown-FP2 unknown-FP4
unknown-FP3 ZIIIA ZIIIB Htf9-site_E_(5) Htf9-site_G_(2) CAAT_site(1)
Zif_(1) Zif_(2) TATA_(3) Zif_(3) COUP-NRE_1 COUP-NRE_2 oris HBV-EF-C_site_(2)
baculovirus-hr5 AGP-HA decamer/octamer pd CAAT_site(2) OCTA_(2)
BB1-beta-globin BCT HS-40_(1) HS-40_GATA1(b) HS-40_5prime-NA HS-40_3prime-NAI
zeta-2-globin-GTII HS-40_GATA1(c) HS-40_GATA1(d) HNF3-W MREe TD2
TD3 hsp70-HSE_(3) HSE_(4) CD4-1 CD4-2 CD4-3 NRF-2-A NRF-2-B
RIPE3b LH-ERE Pit-1-P2 prolactin-site_A_(9) Pit-1-P1 UF aminopeptidase-N-DF
delta-globin-PYR beta-globin-GT-I alpha-actin-SRE3 alpha-actin-SRE2 TdT-site_E_(6)
mTDT-site_D_(8) mTDT-site_D'_(1) mTDT-site_C_(7) mTDT-site_B_(10) mTDT-site_A_(10)
mTDT-site_F_(4) lambda5-site_E_(7) Ik-2-lambda-5 EBF-1/Ik-1-lambda5-site
lambda5-site_C_(8) lambda5-site_B_(11) lambda5-site_A_(11) lambda5-site_F_(5)
IgH-V1-BF-site VDRE_CS_(2) GRE_(4) TRE_(2) GR-intron-site-1 collagenase-TRE
dNRE_(1) MMTV-dNRE_(2) GRES4 GREM2 GREM3 GREM4 GREM5 GREM6
IL-6-MREI GR-IL-6-Inr IL-6-Inr_(1) PRE ERE_(5) mERM ERE_(6)
TRE_(4) ERE1 ERE2 ERE3 ERE4 ERE5 Elk-1-SRE MEF-2-HF1
MEF-2-A/T Elk-1-E Elk-1-F Elk-1-G Elk-1-Q Elk-1-H Elk-1-M Elk-1-T
Elk-1-P Elk-1-D Elk-1-A Elk-1-J Elk-1-L Elk-1-K UBE OMP-Inr
hsp70B-HSE HSE_(6) TRF-TRA TRF-site-C TGF-beta-3-DS2 SEF3-alpha4 C/EBP-apoB-intron-enhancer
apoB-intron_1-enhancer_II apoB-intron_1-enhancer_III apoB-intron_1-enhancer_IV
AP-2-apoB-intron_1-enhancer_V apoB-intron_2-enhancer_A apoB-intron_2-enhancer_B
NF-1-intron_2-enhancer_C apoB-intron_2_enhancer_D apoB-intron_2-enhancer_E
apoB-intron_2_enhancer_F collagenase-TRE_(2) MB6 MB3 MB1a
rpe_UAS PU_box PYK-UAS GT_motif ABRE/Em1a ApoB-reducer_(1) ApoB-reducer_(2)
ApoB-reducer_(3) ApoB-reducer_(4) ApoB-reducer_(5) ApoB-site_a ApoB-site_b
ApoB-site_c ApoB-site_d ApoB-site_e ApoB-site_f ApoB-site_g ApoB-site_h
ApoB-site_i transferrin-Ia/I1 HLA-DRB1-Xbox HLA-DQB1-Xbox IL2-US1 IL2-TCEp
E2-TATA/E2T E2-N5-T E2MT E2TM SAS1_alpha SAS1_beta PE1 PE3
RE1 AS-C-intron_I enhancer/Tbeta2 PU2/MCB PU3/MCB C21/MCB C2/MCB
C6/MCB SAA1-site_IV_(1) C/EBP-SAA-1 SAA-site_II_(2) C/EBP-SAA-2 CRE_(5)
DHS_E_(1) DHS_E_(2) PTH-CRE UAS-rpg URS CDEI_(2) CDEI_(3) CDEI_CS
UAST52/ORE DDR2-site_A_(13) DDR2-STRE SSP1-HSE SCB_consensus 35SRNA2 URS1_(1)
SPO13-URS1 ARS_(1) ICL1-CSRE FBP1-CSRE CEN_homology hsg GBS1/DASI_(1)
DRSII_(1) GBS2/DASI_(2) DRSII_(2) TBP-ARS-B2 TBP-ARS_(2) TBP-ARS_(3) TBP-HMRE_ARS_(1)
TBP-HMRE_ARS_(2) TBP-ARS_domain_A TBP-ARS_domain_B UAS1CHA UAS2CHA TATA
MCM-P-site P+Q HSE_(8) HSE_(9) ARS-site_III ARS-site_I_(1) ERG11-UAS1
ERG11-URS1 ERG11-URS1-2 ERG11-URS2 ERG11-UAS2 PHO4-PHO8 HSE-p J18
J65 G41 G30 K14 CDE1-D1 yATF-A DRS1/ABF1-G DRS1/ABF1-H
Hoxa-7_RS UAS1_(3) UAS1_(4) UAS1_(5) UAS1_(6) UAS2_(5) UAS2_(6) CDE
CDE1 HO-XBS HSE-SSA4 RRE UIS_3' UIS_5'_(1) UIS_5'_(2) PoR
ERE_(7) lactoglobulin-D2 A1-1 A2-1 A1-2 A3S S2
StM TRH core_promoter/TATA NFB_site ANF-GRE ANF-site_V ANF-site_IV
ANF-site_III ANF-site_II ANF-site_I collagen-A-34 betaE1_(2) betae2 C-rich_element
betae3 betae4 betae5 betae6 SKO1-JN04-CRE CRE_(8) TRE_(6) TGF-beta-RE
Talpha1/CRE Talpha2 AP-1_site CARE1/CARE2 CARE3/CARE4 laminin-RARE RARE/gamma2_RARE
beta-RARE1 rCRBPII-RXRE rCRBPI-RARE DR-5-RARE CRABP-II-RARE2 RARE1 DR-1/RXRE
DR-2 T3RE/OP T3RE-half-site mCP-H-RARE MYH6-T3RE OL-4/RARE OL-1/RARE
OL-3/RARE OL-8/T3RE OL-9/T3RE OL-10/T3RE OL-11/T3RE/RARE OL-13/T3RE INV-PAL(+3)/T3RE
PAL/T3RE/RARE DR/nT3RE Pit-1-hCS-B hCS-1-T3RE GLYCA-nTRE somatotropin-nT3RE
mCRBPI-RARE gamma-F-crystallin-RARE DR+2_(1) DR+2_(2) DR+2_(3) DR+2_(4)
DR+5_(1) DR+5_(2) DR+5_(3) DR+5_(4) DR+5_(5) DR+5_(6) DR+5_(7) DR+5_(8)
PAL+0 PAL+1 DR+1 DR+4 DR+5 INV-PAL+4 INV-PAL+5 TRE-LAP
ACOA-PPRE PPRE EcRE_(2) HBV-FPV TAF RRE-M E-pal TFIIIA-UAS
mADA-site_A mADA-Sp1-site_B mADA-Sp1-site_C apoB-reducer-E apoB-reducer-F
apoB-reducer-G apoB-reducer-site_a apoB-reducer-site_b apoB-reducer-site_c
apoB-reducer-site_d PEPCK-T3RE AFP-Ib/Ia AchR-distal_E-box AchR-proximal_E-box
GCRE1 GCRE2 GCRE3 GC_box_(3) 35SRNA1-Site-1 CRE_(9) TAT-BIII
DCRE CRE_(11) CRE_(12) CRE_(13) PPT-A-CRE HBV-CRE-like_element c-fos-DSE-E_box
c-Ets-stromelysin NRF-2-A/B site_C_(10) site_D_(10) GCR1-UASTPI-1 RAP1-TPIUAS
alpha2-RARE myc-TCE IL5-CLE0 CLE0_(2) globin-HS2-GTGGG-site c-Myb-site_IV
c-Myb-site_IV_(2) ME1/TR_box MP1/TR_box HCR_(1) HCR_(2) HCR_(3) HCR_(4)
HCR_(5) HCR_(6) sim-Sna-1 sim-Sna-2 sim-Sna-3 sim-Sna-4a/Sna-4b sim-Sna-5b
sim-Sna-5d Sox-5-BS12 enhancer/BS-1 enhancer_(1) enhancer_(2) enhancer/BS-2
IRS-CS gfa-region_A-fp gfa-region_B-fp gpa-region_D-fp PRP_box_1 UAS_II
UAS_IV UAS_V HS4_18C GCR1-UASTPI-2 delta_repressing_elements delta-activating-CS
SBE mu-E5_(2) h/E-1 GC-box_(4) myoD1-MCAT-CAAT CCAC_box kappaE3-CRE-core
kappa-E3prime-enhancer/DS kappa-E3prime-enhancer/PU_box Lmo2-E-box-1 PR264-MRE_J
PR264-MRE_K PR264-MRE_C PR264-MRE_I PR264-MRE_H PR264-MRE_B PR264-MRE_G
PR264-MRE_F PR264-MRE_A PR264-MRE_E PR264-MRE_D EFIII IPE MMTV-F3
MMTV-F12 MMTV-F4 MMTV-F1b IK-BS1 IK-BS2 IK-BS3 IK-BS4 IK-BS6
IK-BS7 IK-BS8 deltaA TCR-Vbeta-dodecamer MEF2D-c-jun histone-H2B-CCAAT
H2B-variant-octa C13 STAT1-IRF-1 DR-4 UPE1 UPE2 UPE3
region_I_enhancer ICS_(3) MHC-class-I-site_alpha LP-alpha LP-beta Oct-1-lyn-T
TRP1-site_A TRP1-site_E SIF3 SIF2 SIF1 Tax/CREB-JC-core Tax/CREB-C6
CREB-G10 V-beta-8.1-CACCC HEN1-site1 Adf-1-CS DBP-CS enhancer_E_box TB1
TFE3-S-Adh-2 HNF-1-ApoB-E c/ebp-ApoB-E ABF-2-MLC2-P MLC-2-site-S ABF-1-MLC-2-site-A
MLC-2-site-B MLC2-site-C Zta-BMRF1 IGLL-Elambda2-4-A IGLL-Elambda2-4-B
IGLL_Elambda2-4-C IGLL-Elambda3-1-A IGLL-Elambda3-1-B IGLL-Elambda3-1-C
catalase-silencer-element vimentin-antisilencer_element DBP-CYP26 RVL-3-1R
neu-GTG TEF-prolactin-BTE PTF-7SK-RNA-PSE ADA-NF1-ADA TCF-1alpha-ADA ADA-HSIII-FP3
FTZ-F1-ADH DEP3-ADH Sp1-ATP1A1 ATP1A1-ARE mMDH-FP1 BSAP-CD19-site_1 BSAP-CD19-site_2
HSF1-hsp70A-HSE-distal GATA-1-beta-globin-HS-3_(1) GATA-1-beta-globin-HS-3_(2)
GATA-1-beta-globin-HS-3_(3) SRY-CD3-epsilon IL2-EBS2 rice-actin-site-1
rice-actin-MPE c-myc-PUR peripherin-PER3 peripherin-PER2-site-1 peripherin-PER1
snail-PLA-site-1 snail-PLA-site-2 snail-PLA-site-3 snail-PLA-site-4 snail-VA-site-5
snail-VA-site-6 snail-VA-site-7 snail-VA-site-8 snail-VA-site-9 snail-VA-site-10
snail-AE-site-11 snail-AE-site-12 TTF-1-TPO-A TTF-1-TPO-B' TTF-1-TPO-B
TTF-2-TPO-Z TTF-1-TPO-C HNF-3-HNF-3-1 HNF-3-HNF-3-2 LF-H3beta-HNF-3 UF2-H3beta-HNF-3
N-Oct-3-CS Brachyury-CS Agamous-CS AP-1-hANF core-bf-SIV core-bf-Igh core-bf-Igh-2
core-bf-TCRG core-bf-TCRG-2 CAC-bf-HS-40 CEBPB-TGA2 NF-4FA-4F2HC NF-4FC-4F2HC
NF-4FB-4F2HC A4_amyloid_protein-undefined-s MyoD-acetylcholine_receptor
REB1-ACT1 CBF-alpha-actin alpha-actin-undefined-site MRE/SRE1 MAPF1-alpha-actin
SRF-alpha-actin_(1) SRF-beta-actin Elk-1-beta-actin ETF-beta-actin_(1)
ETF-beta-actin_(2) ETF-beta-actin_(3) ETF-beta-actin_(4) CArG-actin Adf-1-Adh-distal-1
Adf-1-Adh-distal-2 HNF-1-albumin_(2) HNF-1-albumin_(3) C/EBP-albumin_(1)
C/EBP-albumin_(2) NLS1-albumin NF-1-albumin HNF-3-albumin CBF-albumin HNF-1-pB
C/EBP-albumin_(3) DE-I HP1_site PTF1-alpha-amylase Tf-LF1-antithrombin_III
HNF-4-alpha1-antitrypsin HNF-1-alpha1-antitrypsin_(1) HNF-1-alpha1-antitrypsin_(2)
Antp-Antp RARE/site_A distal_region_I/_M C/EBP-apoAII distal_region_I/_K
AIIJ-element distal_region_I/_I apoE-B2-V apoE-ERE apoE-PET apoE-B1-II
apoE-B2-II Sp1-apoE apoE-FP-DI-B2 apoE-FP-DII E2 E1 LF-A1-apoVLDL-II
ANF-undefined-site hE-IRS ME12-element_B ISRE/IRE/B_region RAP1-BCY BK_virus-FP-IV
NF-1-BK_virus BK_virus-FP-II E2-BPV-1-1 E2-BPV-1-2 RII Zta-BSLF2+BMLF1/BC-R2
TAF-CIII-sub_II TAF-CIII-sub_VI PTF1-carboxypeptidase_A REB1-CDC9 AGP/EBP-artificial_sequence
CHS-box-II MRE-CHS Chox-1-site_1.4-1 Chox-1-site_1.4-2 Chox-1-site_a-1
Chox-1-site_a-1' Chox-1-site_a-1'' Chox-1-site_a-2 Chox-1-site_a-3 Chox-1-site_a-4
COL1A1-undefined-site-1 procollagen-Region-A NF-1-alpha2 EFI-alpha2 CP1-GBRE
HNF-1-CRP HNF-1-CRP-2 C/EBP-CRP MEF-2-mck E1_site E3_site alphaA-crystallin-DE1
alphaA-crystallin-d-site alphaA-crystallin-undefined-s3 HAP1-CTT1 TAF-CYC1
XRE2 cyt-P-450c-DXE5 DHFR-undefined-site-1 DHFR-undefined-site-2 Adf-1-Ddc
ddc-be-2 Oct-3-RS NF-1-E1a NF-1-E1a_(2) E1a-undefined-site element_C EIIE-E1A-responsive-element
DRTF1-E2-early_promoter_(1) EIIaE1-T1-element element_T1 CTF-E3 TFIID-E3
CAP-E4 RAP1-E8 RAP1-RPG_box Sp1-EGF_receptor_(1) EGFR-undefined-site-1
EGFR-A-box Sp1-EGF_receptor_(2) Sp1-EGF_receptor_(3) ETF-EGF_receptor_(1)
Sp1-EGF_receptor_(4) ETF-EGF_receptor_(2) EGFR-EIII-site-1 EGFR-EIII-site-2
RPF1-EGF_receptor EGFR-undefined-site-5 EGFR-downstream-enhancer-s1/3 EGFR-downstream-enhancer-s6/7
EGFR-downstream-enhancer-s8 elastase_I-EIeB-IX elastase_I-EIeB-VIII elastase_I-B-element
elastase_I-undefined-site-4 elastase_I_A-element ElaI-PCE-box-B XPF-1-elastase_I
elastase_I-FP-II elastase_I-FP-I elastase_II-site_I ENKTF-1-factor-IX C/EBP-factor_IX
ICSBP-complement_factor_B HNF-1-alpha-fetoprotein_(1) HNF-1-alpha-fetoprotein_(2)
NF-1-FIB2 YMRF_site Sp1-gamma-fibrinogen SGF-2-fibroin_(1) SGF-2-fibroin_(2)
SGF-2-fibroin_(3) CREB-fibronectin NF-1-fibronectin DSE c-fos-RbRE
GAL4-artificial_sequence_(1) GAL4-GAL7_(1) GAL4-GAL7_(2) CTF-alpha-globin
EFgammaa-alphaA-globin alpha-CP2a/-alphaA-globin GATA-1-3'-site GATA-1-alphaA-globin_(1)
GATA-1-alphaA-globin_(2) GATA-1-beta-globin_(1) GATA-1-beta-globin_(2)
GATA-1-beta-globin_(3) betaH-globin-undefined-site GATA-1-betaH-globin_(1)
TGGCA-binding-betaH-globin GATA-1-betaH-globin_(2) GATA-1-betaH-globin_(3)
GATA-1-betaM-globin_(1) GATA-1-betaM-globin_(2) betaM-globin-undefined-site
betaM-globin-IVS2-B2 Spi-1-betaM-globin_(1) Spi-1-betaM-globin_(2) gamma-globin-undefined-site-1
GATA-1-gamma-globin_(1) GATA-1-gamma-globin_(2) GATA-1-gamma-globin_(3)
EFgammaa-gamma-globin Sp1-zeta-globin_(1) GATA-1-zeta-globin ZF1-zeta-globin
ZF2-zeta-globin Sp1-zeta-globin_(2) alpha2uNF3-alpha-2u_globulin alpha2uNF2-alpha-2u_globulin
alpha2uNF1-alpha-2u_globulin Sp1-alpha-2u_globulin CBF-alpha-2u_globulin
AP-1-alpha-2u_globulin glucagon-IRE glucagon-G2-element glucagon-G1-element
TSH-alpha-URE NF-1-glycoprotein_hormone_alph GPIIb-proximal-EBS CK-1/_CK-2
NF-kappaB-GM-CSF_(1) NF-kappaB-GM-CSF_(2) Sp1-growth_hormone GHF3_binding_site
GH-T3RE GH-PRE T3R-growth_hormone su(Hw)-gypsy su(f)-gypsy haptoglobin-IL-6-RE
C/EBP-haptoglobin HBV-enhancer_II BAS1-HIS4 PHO2-HIS4_(1) PHO2-HIS4_(2)
HiNF-B-histone_H1 histone_H1-beta-undefined-site histone_H3-undefined-site
HiNF-D3-histone_H3 histone_H3.2_site_X ASF-1-histone_H3 histone_H4-site_II
AP-1-HIV-1 NRE/_site_1 c-Rel-HIV-1 EBP-1-HIV-1 FP2 HMRE_ARS_(3) RAP1-HMR
CCBF-HO F_region E-region NF-1-Hox-1.5 NF-1-HPV-8_(1) NF-1-HPV-8_(2) NF-1-HPV-8_(3)
NF-1-HPV-8_(4) NF-1-HPV-11_(1) NF-1-HPV-11_(2) NF-1-HPV-11_(3) NF-1-HPV-11_(4)
NF-1-HPV-16_(1) NF-1-HPV-16_(2) NF-1-HPV-16_(3) NF-1-HPV-16_(4) NF-1-HPV-16_(5)
NF-1-HPV-16_(6) NF-1-HPV-16_(7) NF-1-HPV-18_(1) NF-1-HPV-18_(2) NF-1-HPV-18_(3)
EcR-hsp27 HSTF-hsp70 HSF-hsp70_(1) HSF-hsp70_(2) HSF-hsp83 NF-1-CMV-IE1
HCMV-IE-1-undefined-site CMV-enhancer/_19_bp_repeat_(1) CMV-enhancer/_19_bp_repeat_(2)
enhancer/_18_bp_repeat_(1) AP-1-IE-1 NF-kappaB-IE-1 Oct-1-IE-1 alphaH2-alphaH3-IE-2
Oct-1-IE-3 Oct-1-IE-3_(2) Oct-1-IE-3_(3) Oct-1-IE-4/5 IFI-56K-ISRE C/EBP-V1/VH-III
muEBP-E-IgHC-site Oct-1-IgH-1 IgM-enhancer_site_E 96K-protein-IgH IgHC-Eu-octamer
kappa-A_site muEBP-E-Igklc-site Isl-1-insulin Far_box insulin-A3/4 InsCRE
Nir_box_(2) ARP-1-insulin AdMLP-UPS IRF-1-IFN-alpha1 IFN-beta-PRD-III EBS1
NF-IL-2A-IL-2 IL-2kappaB CD28RE NF-kappaB-IL-2Ralpha IL-2Ralpha-kB-3X
ISG15-ISRE_(4) NF-1-JCV-A/B NF-1-JCV-site-C AP-1-JE Sp1-c-jun_(1) AP-2-c-jun_(1)
AP-2-c-jun_(2) AP-1-c-jun krox20-SRE-1 NAT2-BS1 NAT2-BS2 RAP1-LSR1 Ad-MLP-undefined-site
USF43-Ad-MLP CBF-MLP R1-MLP R2-MLP MLP-DE2 DEF-MLP DTF-MLP MLP-mitigator
UAS/_d MTII-distal_BLE MTII-proximal_BLE_(1) MTII-proximal_BLE_(2) CUP2-CUP1_(1)
CUP2-CUP1_(2) CUP2-CUP1_(3) P_box_(1) P+Q_boxes_(1) P+Q_boxes_(2) MATalpha1-MFalpha2
AP-1-MHC_class_I_H-2Dd H-2K-ICS_(4) HC-Kb-site_alpha_(2) PU-MHC_class_II_I-Abeta
NF-MHCIIA-MHC_class_II_Dbeta NF-MHCIIB-MHC_class_II_Dbeta NF-W2-MHC_class_II_Ealphad
MHC_class_II_Ekalpha-undefined I-Ealpha-Y'-box E-alpha-Pu-site W_box
X_box_(2) Y_box_(3) HLA-A3-ISRE MHC_class_II_HLA-DRA-undefined ICSBP-beta2-microglobulin
PR-MMTV GR-MMTV_(2) C/EBP-MSV MIF-c-myc myc-CF1-c-myc_(1) Sp1-MBP myosin_light_chain_2-A_-undef1
myosin_light_chain_2-A_-undef2 alphaMHCBF1-alpha-MHC EBNA-1-EBV_oriP EBNA1-enhancer-I
EBNA1-enhancer-II EBNA1-enhancer-III EBNA1-enhancer-IV RAR-alpha1-osteocalcin
osteocalcin-VDRE SIS-distal-element ROM2_CS PAL-ELREF PAL-undefined-site-2
PHO4-PHO5_(1) PHO2-PHO5 PHO4-PHO5_(2) RAP1-PHO5 TAF-PHO5 A_enhancer/_alpha
SAP-1b-PEA3* GATA-1-PBGD_(1) NF-E2-PBGD GATA-1-PBGD_(2) GATA-1-PBGD_(3)
CAC-binding-PBGD_(2) AP-4-proenkephalin AP-2-proenkephalin Pit-1-prl prolactin-ERE
PCNA-region-III PCNA-region-II PCNA-region-I proliferin-Sph-element GBF-CP2
RAP1-PYK1 REB1-RAP1 CTF-1-ras1 G_box GT-1-rbcS-3A GBF-rbcS-3A CF1-RAR-beta
GABP-rpl32 delta-rpL32 TAF-rpS33 P1-S14 NF-1-SL3-3 P_box_(2) Q+P_box
MATalpha2-STE6 T-Ag-origin_of_replication LSF-SV40_(2) TC-I/TC-II NF-kappaB-SV40
AP-4-SV40_(1) LSF-SV40_(3) NFalpha2-T_cell_receptor_alpha NFalpha3-T_cell_receptor_alpha
NFalpha4-T_cell_receptor_alpha TG-III Tg-K-region TNF-alpha-CK-1 NF-kappaB-TNF-alpha
TNF-alpha-Y_box transferrin-Ia/Ib transferrin-DR-II PR_I transin-TIE
AP-1-TTR REB1-TRP5 REB1-TRP1 PTF1-trypsina-1 PTF1-trypsina-2 MCM1-Ty1-site_2
MCM1-Ty1-site_1 TyBF-Ty917 STE12-Ty917 GR-TAT TAT-undefined-site-1 TAT-undefined-site-2
TAT-undefined-site-3 U2_snRNA-octamer SPH_motif CRE/octamer U7_snRNA-undefined-site-1
U7/5-initiation_site GAGA-Ubx_(2) Zeste-Ubx_(1) GAGA-Ubx_(3) Zeste-Ubx_(2)
Elf-1-Ubx Zeste-Ubx_(3) GAGA-Ubx_(4) Zeste-Ubx_(4) GAGA-Ubx_(5) Zeste-Ubx_(5)
En-Ubx Ubx-undefined-site GBF-UDPGPP uPA-undefined-site-1 uPA-US-domain-A
uPA-US-domain-B uPA-US-domain-C uPA-region-C-CRE uPA-undefined-site-4 uPA-FP-VII
uPA-GC-II AP-2-vasopressin AP-1-vimentin Visna-undefined-site AP-1-Visna
NF-1-vitellogenin_II NHP-2-vitellogenin_II PR-vitellogenin_II GR-vitellogenin_II
ER-vitellogenin_II_(1) cVitII-FP7 ER-vitellogenin_II_(2) C/EBP-vitellogenin_II
TF-Vbeta-vitellogenin_II USF-vitellogenin_II NHP4-vitellogenin_II C/NRE
vitellogenin-B1-B/BPE vitellogenin-B1-BPE/B-ABS vitellogenin-B2-left-hand_ERE
vitellogenin-B2-2-ERE WAP-undefined-site REB1-X40 REB1-Y30 pMS1-HMG-FP
c-Myc-distal-kB HBP-1-nos Egr-1-Egr-1_(1) Egr-1-Egr-1_(2) Egr-1-Egr-1_(3)
T3R-alpha-malic_enzyme LBP-1-sTnI_(1) LBP-1-sTnI_(2) LBP-1-sTnI_(3) NF-1-alpha1I3
AFP1-alpha1I3 alpha1I3-element-IV DAP-MLP MAL63-MAL61/62-site-2 MAL63-MAL61/62-site-1
NF-kappaB-IL-6 RadLV-core RadLV-UEA RadLV-UEB RadLV-promoter MuLV-undefined-site
LPV-PU-box LPV-T_element FeLV-core NF-1-FeLV FLV-1-FeLV BSAP-histone_H2B-2.1
TSAP-histone_H2B-2.2 BSAP-histone_H2A-2.1 Pax-6-histone_H2A-2.2 c-fos-FIRE
NeP1-lysozyme lysozyme-silencer-F2-TRE NCAM-C-CG_box Oct-1-IgH-2 vimentin-negative-element
PEPCK-RARE BAF1-rpL2_(1) BAF1-rpL2_(2) IAP-LTR-Enh1 GR-alpha-fetoprotein
alpha-fetoprotein-EE5 C/EBP-GLUT4 Adh1-B2 Adh1-B1 c-Ets-1-GPIIb dl-GPIIb
dl-twi_(1) dl-twi_(2) dl-twi_(3) dl-twi_(4) dl-zen-fragment-1 chymotrypsinB-enhancer-site-2
Low-alpha-PAL-eIF-2alpha GM-PBP-1-GM-CSF c-myb-undefined-site-1 AP-1-c-myb
c-myb-undefined-site-2 CG-1-chs_(1) CG-1-chs_(2) CG-1-rbcS histone_H2A-undefined-site-1
histone_H2A-undefined-site-2 IFN-alpha1-PRDI NF-kappaB1-IRF-1 MHC_class_II_Ia_Aalphak-undefi
CaSRE2 CTF-alpha-actin Sp1-alpha-actin_(1) Sp1-alpha-actin_(2) Sp1-alpha-actin_(3)
Sp1-alpha-actin_(4) SRF-alpha-actin_(2) Sp1-alpha-actin_(5) Sp1-alpha-actin_(6)
Sp1-alpha-actin_(7) KBF1-E1B USF-TS Sp1-TS_(1) Sp1-hsp70_(2) HSF-artificial_sequence
BK_virus-HCR Oct-1-Igk-1 Oct-1-Igk-2 Oct-1-Igk-3 En-en-1 En-en-2 En-en-3
En-en-4 En-en-5 En-en-6 GAL4-CYC1 SV40-DUE SRF-zif268_(1) SRF-zif268_(2)
SRF-zif268_(3) C/Ebp-DBP-aldolase-B CBF-aldolase_B HNF-1-aldolase_B E2F-DHFR
DHFR-GC_box_I NHE E1A-enhancer-site_A_(1) E1A-enhancer-site_A_(2)
HNF-1-HBV-SPI X'_box GR-non-functional_site EFII-RNR2 EFII-ALV_LTR_(1)
ALV_LTR-CCAAT/enhancer-a2/a3 ALV_LTR-a3 f(alpha)-f(epsilon)-rpL30 gamma-factor-prL30
delta-rpL30 Oct-2-IgH GABP-IE3 STE12-PIE/_HinfI PIE/_PRE CUP2-CUP1_(4)
c-Myb-SV40 octopine-synthase-ocs-element E2F-c-Myc-site-I CP1-gamma-globin_(1)
theta1-globin-undefined-site GAGA-E74_(1) GAGA-E74_(2) GAGA-E74_(3) GAGA-E74_(4)
GAGA-E74_(5) GAGA-E74_(6) antp-pos-elem-A1 antp-pos-elem-A2 antp-positive-element-A
antp-negative-element-B antp-positive_element_C Tg-undefined-site-3 TTF-1-Tg
Tg-site_K TgF1-Tg UFA-Tg P_box_(3) NFH3-4-histone_H3 NFH3-3-histone_H3
NFH3-2-histone_H3 NFH3-1-histone_H3 P_box_(4) BP1-beta-globin_(1) BP1-beta-globin_(2)
NHP-1-vitellogenin_II TB3 GC_boxes_IV/III GC_box_II AP-1-IE MBF1-IE
MBF2-IE AFP1-surface_antigen HBP-1-35S_RNA OCSTF-ocs BAF1-YPT1-TUB2_intergenic_regi
BAF1-ARS1 Sp1-DHFR HIP1-DHFR HIP1-SV40 GLI-genomic-CS NF-H2-MHC_class_II_I-Aalpha
RF-X-MHC_class_II_I-Aalpha NF-Y-MHC_class_II_I-Aalpha betaE-F1 BAF1-ARS1-domain_B
Adh-undefined-site PPYR-betaA-globin Sp1-betaA-globin TFIID-betaA-globin
USF-IVa2 ICP4-IE3 v-ErbA-artificial_sequence GCN4-TRP4_(1) GCN4-TRP4_(2)
MIG1-SUC2_(1) MIG1-SUC2_(2) AP-1-NPY Sp1-NPY gastrin-negative-element
S14-site-A AFP-site_V_(2) AFP-site_III_(3) AFP-site_II BGP1-artificial_sequence-1
BGP1-artificial_sequence-2 C/EBP-HBV-secondary_site Ttk-eve_(1) GAGA-eve_(1)
GAGA-eve_(2) Ttk-eve_(2) GAGA-eve_(3) GAGA-eve_(4) GAGA-eve_(5) GAGA-eve-site-1
GAGA-eve_(8) eve-undefined-site troponin-CARG cTNT-M-CAT_1 cTNT-M-CAT_2
AP-4-SV40_(2) EUSF-histone_H5 USF-ADH USF-Spec1 Hox-2.3-undefined-site-1
Hox-2.3-undefined-site-2 Krox-20-Hox-2.3 Hox-2.3-undefined-site-3 Hox-2.3-undefined-site-4
Hox-2.3-undefined-site-5 USF-Hox-2.3 Hox-2.3-D1 PEA3-uPA c-Ets-1-transin/stromelysin
Talpha2_site c-Ets-1-HTLV-I Sp1-MYM1 Sp1-artificial_sequence-1 Sp1-artificial_sequence-2
Sp1-artificial_sequence-3 Sp1-artificial_sequence-4 Sp1-artificial_sequence-5
Sp1-artificial_sequence-6 Sp1-artificial_sequence-7 Sp1-artificial_sequence-8
Sp1-artificial_sequence-9 Sp1-artificial_sequence-10 Sp1-artificial_sequence-11
SWI5-HO BSAP-consensus SRF-consensus GAF-consensus HSF-consensus LF-A1-consensus
LyF-1-consensus MEF-2-consensus CTF-consensus NF-E2-consensus_(1) Oct-3/4_RS
PPAR-consensus PTF1-consensus SIF-consensus p67-consensus TIN-1-consensus
XPF-1-consensus GAGA-Kr Ttk-en Ttk-consensus Tll-Kr_(1) Tll-Kr_(2) Tll-Kr_(3)
BCD2/BCD3 Tll-Kr_(4) BCD4/BCD5 Tll-Kr_(5) Tll-Kr_(6) Kni-Kr Tll-Kr_(7)
USE_(1) USE_(2) CF2-II-s15_(2) CF1-s15 CF2-II-s15_(3) opaque-2-22Z-1
opaque-2-pML1 opaque-2-Z7 opaque-2-22Z-2 MAZ-c-myc-ME1a2 WT1-selected_genomic_sequence1
WT1-selected_genomic_sequence2 WT1-selected_genomic_sequence3 WT1-selected_genomic_sequence4
WT1-selected_genomic_sequence5 WT1-selected_genomic_sequence6 CF2-I-CF2
CF2-I-artificial_sequence CF2-II-artificial_sequence URS1 repressor-MES1
HSE2_(2) repressor-TOP1 repressor-PYK1 repressor-CTA1 repressor-G3PDH repressor-CAR2
repressor-ILV2 repressor-CYB2 repressor-ARG4 repressor-ENO1 repressor-CTT1
repressor-HSF1 ANF-albumin-1 ANF-albumin-2 MuLV-RBS KBF1-MHC_class_I_H-2Kk
MHC_class_I_H-2Kk-undefined-si Ii-kappa-B-1 SF-3-SCC SF-2-SCC SF-1-SCC
CYS3-cys-14_(1) CYS3-cys-14_(2) CYS3-cys-14_(3) CYS3-cys-3 Pu-box PEPCK-AF2
Ftz-ftz_(1) Ftz-ftz_(2) Ftz-ftz_(3) Ftz-ftz_(4) Ftz-ftz_(5) Ftz-ftz_(6)
Ftz-ftz_(7) Ftz-ftz_(8) Ftz-ftz_(9) Ftz-ftz_(10) Ftz-ftz_(11) Ftz-ftz_(12)
Ftz-ftz_(13) Ftz-ftz_(14) Ftz-ftz_(15) Ftz-ftz_(16) Ftz-ftz_(17) Ftz-ftz_(18)
Ftz-ftz_(19) Ftz-ftz_(20) Adh-1-undefined-site_(1) Adh-1-undefined-site_(2)
Adh-1-undefined-site_(3) BAF1-RPC160 BAF1-RPC40 BAF1-consensus_(2) AP-1-CCK
CCK-1b-CCK NF-lambda2-immunoglobulin_lamb Sp1-t-PA Oct-1-Ocr HrpF-rpL14
su(Hw)-MHC_class_II_DPA Ets-site_A_(17) E74EF-site_B E74EF-site_C E74A-consensus
DRA-W-element V21_element RAP1-CS ISGF-3-IFI-56K ATF-E4_(1) Ly6E/A-CCAAT
Ly6E_differentiation_antigen-2 PPR1-dependent-REB1 GA-BF-URA3 SV40-MBS-I
TCR-beta-site-1 AP-1-TCRBV17 TCR-betaE2 TCR-betaE3 TCR-beta-site-2 BAF1-PYK1
MLC-3'-enhancer-1 Myf-3-MLC globin-HS2-NFE2-right Sp1-CRE-BP1_(1) Sp1-CRE-BP1_(2)
AP-2-CRE-BP1 Sp1-CRE-BP1_(3) CRE-BP1-CRE-BP1_(1) Sp1-CRE-BP1_(4) CRE-BP1-FP-B
CRE-BP1-FP-A Sp1-CRE-BP1_(5) Sp1-CRE-BP1_(6) Sp1-CRE-BP1_(7) Sp1-CRE-BP1_(8)
CRE-BP1-CRE-BP1_(2) Sp1-CRE-BP1_(9) Sp1-CRE-BP1_(10) Sp1-CRE-BP1_(11) NFE-6-GPC
GATA-1-GPC_(1) GATA-1-GPC_(2) Sp1-GPC_(1) GPC-U2/CAC Sp1-GPC_(2) GATA-1-GPC_(3)
Sp1-TGF-alpha Ftz-artificial_sequence_(1) MyoD1-alpha-actin NF-E2/AP-1-beta-globin
MMTV-F1a H2B-abp-1-H2B CREB-glucagon C/EBP-SAA3 C/EBP-albumin_(4) AGP-site_B
AGP-site_A AP-2-type_IV_collagenase (NF-kappaB)-complement_C4 XF1-cytochrome_P-450c
A5CE-2_element C/EBP-complement_C3 complement_C3-FP-I Zmhox1a-Sh_(1) Zmhox1a-Sh_(2)
Zmhox1a-Sh_(3) Ubx-artificial_sequence-1 Ubx-artificial_sequence-2 Ubx-artificial_sequence-3
Ubx-consensus Dfd-consensus hsg_operator En-artificial_sequence Prd-artificial_sequence-1
gt2 Gt-eve Bcd-eve Cad-ftz Ubx-artificial_sequence-4 Ubx-dpp_(2)
Ftz-Antp Ftz-artificial_sequence_(2) Ftz-artificial_sequence_(3) Ftz-artificial_sequence_(4)
Ftz-artificial_sequence_(5) Ftz-artificial_sequence_(6) Ftz-artificial_sequence_(7)
Ftz-artificial_sequence_(8) Ftz-artificial_sequence_(9) Ftz-artificial_sequence_(10)
Ftz-artificial_sequence_(11) Ftz-artificial_sequence_(12) Ftz-artificial_sequence_(13)
Ftz-artificial_sequence_(14) Ftz-artificial_sequence_(15) Ftz-artificial_sequence_(16)
Ftz-artificial_sequence_(17) Ftz-artificial_sequence_(18) Ftz-artificial_sequence_(19)
Ftz-artificial_sequence_(20) Ftz-artificial_sequence_(21) Ftz-artificial_sequence_(22)
Ftz-artificial_sequence_(23) Ftz-artificial_sequence_(24) Ftz-artificial_sequence_(25)
Ftz-artificial_sequence_(26) Ftz-artificial_sequence_(27) Ftz-artificial_sequence_(28)
Ftz-artificial_sequence_(29) Ftz-artificial_sequence_(30) Ftz-artificial_sequence_(31)
Ftz-artificial_sequence_(32) Hb-BRE_1 Hb-BRE_2 Hb-BRE_3 fAE2B/_CDRE fAE3/_A-R_region
fRE1/_A-R_region fDE1/_A-R_region C/EBP-CPSI COL1A1-A1 COL1A1-A2 COL1A1-B1
EF-C-HBV Sp1-malic_enzyme DRE/MPE-2 TAF-malic_enzyme TAF-consensus lysozyme-E-2.7_kb_(1)
lysozyme-E-2.7_kb_(2) lysozyme-E-2.7_kb_(3) lysozyme-E-2.7_kb_(4) lysozyme-E-2.7_kb_(5)
lysozyme-E-0.2_kb_(1) lysozyme-E-0.2_kb_(2) lysozyme-E-0.2_kb_(3) lysozyme-E-0.2_kb_(4)
lysozyme-E-0.2_kb_(5) lysozyme-E-0.2_kb_(6) KBF1-artificial_sequence KBF2-artificial_sequence
Sp1-rpS16 rpS16-undefined-site MLV-T3RE SBF-U1_snRNA A5CE-1 C/EBP-apoVLDL_II
Sp1-gamma-globin_(1) adipsin-undefined-site adipsin-N-box MHC_class_I_H-2Kbm1_-undefined
c-Myb-artificial_sequence-1 c-Myb-artificial_sequence-2 Kr-consensus_(2)
Hb-consensus-1 Hb-consensus-2 Kr-consensus_(1) Kr-hb Sp1-gamma-globin_(2)
Antp-Ubx_(2) Hox-1-HIV-2 Hox-1-Hox-1.3_(1) Hox-1-Hox-1.3_(2) Hox-1-consensus
GCF-beta-actin_(1) GCF-beta-actin_(2) GCF-EGF_receptor GCF-CANP GCF-consensus
AhR-CYP1A1_(1) AhR-CYP1A1_(2) AhRE3 AhR-CYP1A1_(3) AhR-CYP1A1_(4) AhR-CYP1A1_(5)
alpha-URE AhR-consensus_(1) AF-1-apoCIII ATF-cytochrome_C NRF-1-cytochrome_C
Sp1-cytochrome_C URTF-steroid_11beta-OHase CREB-alphaA-crystallin Sgs3-TATA
ER-vitellogenin_B1 c-Fos-artificial_sequence NF-kappaB-Ig-kappa NRF-1-COX-VIc-2
NRF-1-ubiquinone-binding_prote NRF-1-mitochondrial_RNA_proces MLC-undefined-site
AP-1-alpha1-protease_inhibitor alpha1-PI-NE C/EBP-alpha1-protease_inhibito
apoB-100-FP-E CD28RC-IL-3 NF-GMa-IL-5 TF68-E2-early_promoter DRTF1-E2-early_promoter_(2)
DRTF2-E2-early_promoter TCR-beta-site-3 TCR-beta-site-4 TCR-beta-site-5
TCR-beta-site-6 HEF-1T-S14 AP-2-HTLV-I_(1) HEF-1B-HTLV-I HEF-1T-HTLV-I_(1)
AP-2-HTLV-I_(2) AP-2-HTLV-I_(3) HEF-1T-HTLV-I_(2) Sp1-HTLV-I NF-1-HTLV-I
HEF-4C-HTLV-I GG-II/GG-I SGF-1-fibroin FBF-A1-fibroin AhR-consensus_(2)
SRY-IRE-A Nit2-nit-3-1 Nit2-nit-3-2 Nit2-nit-3-3 Nit2-niaD-1 Nit2-niaD-2
Nit2-niaD-3 Oct-1-IE-2 AP-1-IL-3 NIP-IL-3 Oct-1-IL-3 C/EBP-HBV_(1) HBV-FPII
HBV-enhancer-II-box-alpha C/EBP-HBV_(2) HBV-box-beta C/EBP-HBV_(3) C/EBP-HBV_(4)
C/EBP-HBV_(5) HBV-EnII-FP Pln-II-undefined-site TFIID-MBP kappaY CD2-CD2E1
CD2-CD2E2 CD2-CD2E3 CD2-CD2E4 CD2-CD2E5 CD2-CD2E6 PTF1-IDE C-P450-CTE RAP1-artificial_sequence-2
RAP1-artificial_sequence-3 RAP1-artificial_sequence-4 RAP1-artificial_sequence-5
RAP1-artificial_sequence-6 RAP1-artificial_sequence-7 RAP1-artificial_sequence-8
RAP1-artificial_sequence-9 RAP1-artificial_sequence-10 RAP1-artificial_sequence-11
RAP1-artificial_sequence-12 RAP1-artificial_sequence-13 RAP1-artificial_sequence-14
GF1-JCVE Tst-1-JCVE myH-negative_element HNF-1-CYP2E1 CYP2E1-undefined-site
CBF-CYP2E1 Talpha1_site Talpha3_site Talpha4_site GATA-2-ET-1 RAP1-ENO2
Pax-1-artificial_sequence-1 Pax-1-artificial_sequence-2 Pax-1-artificial_sequence-3
Pax-1-artificial_sequence-4 Pax-1-artificial_sequence-5 Pax-1-artificial_sequence-6
Pax-1-artificial_sequence-7 Prd-artificial_sequence-2 Prd-artificial_sequence-3
ATF-7S_L_RNA RRE-DR-FPV RRE-DR-FPIV RRE-DR-FPIII R-IR4_(1) R-IR4_(2) glutelin-box-V
glutelin-box-IV glutelin-box-III glutelin-box-II glutelin-box-I Oct-1-c-abl/type_I
gamma-globin-3'-enhancer-PPUR 3'-enhancer-3 A-gamma-globin-3'-enhancer-4
A-gamma-globin-3'-enhancer-5 A-gamma-globin-3'-enhancer-6 A-gamma-globin-3'-enhancer-7
A-gamma-globin-3'-enhancer-8 A-gamma-globin-3'-enhancer-9 JCVE-undefined-site_(2)
BCR-undefined-site-1 BCR-undefined-site-2 BCR-undefined-site-3 BCR-undefined-site-4
BCR-undefined-site-5 BCR-undefined-site-6 BCR-undefined-site-7 BCR-undefined-site-8
BCR-undefined-site-9 BCR-undefined-site-10 BCR-undefined-site-11 Sp1-thymidine-kinase
CRE+JRE dl-zen-fragment-5 dl-zen-fragment-6 dl-zen-fragment-7 RKBP-GH_responsive_element
RAR-beta-complement_factor_H Sp1-TPI_(1) Sp1-TPI_(2) Sp1-TPI_(3) CP2-artificial_sequence
FRG-hsp70 UAS2UP1_(2) EFI-MHC_class_I_H-2Kb c-Krox-a1(I)-collagen IF1-alpha1_(2)
alpha-CP1-alpha-globin alpha-CP1-artificial_sequence2 alpha-CP1-artificial_sequence3
alpha-CP1-artificial_sequence4 alpha-CP1-artificial_sequence5 alpha-CP1-artificial_sequence6
alpha-CP1-artificial_sequence7 alpha-CP1-artificial_sequence8 GATA-1-alpha-globin_(1)
GATA-1-alpha-globin_(2) GATA-1-alpha-globin_(3) GATA-1-alpha-globin_(4)
GATA-1-alpha-globin_(5) AP-1-alpha-globin CP1-gamma-globin_(2) GATA-1-delta-globin_(1)
GATA-1-EpoR_(1) GATA-1-artificial_sequence neu-E1A-responsive_element EBP-80-IAP_LTR
IRE_site_I sTnI_-undefined-site GEBF-I-Sgs3_(1) GEBF-I-Sgs3_(2) CREB-PUT1
Oct-1-IL-8 NF-kappaB-IL-8 HNF-1-IGFBP-1 Ad-E3-kappa-2 E3-kappa-1 NF-kappaB-artificial_sequence
NF-kappaB-artificial_sequence2 RAP1-PDC1 PBGD-initiator NF-kappaB-TNF-beta
PEBP5-A_enhancer BAF1-ARS120 ER-calbindin_D-9K fibronectin-CRE-260 BC-R2-undefined-site1
BC-R2-undefined-site2 ICP4-glycoprotein_gD_(1) ICP4-glycoprotein_gD_(2)
ISRE_CS opaque-2-albumin_b-32_(1) opaque-2-albumin_b-32_(2) opaque-2-albumin_b-32_(3)
opaque-2-albumin_b-32_(4) opaque-2-albumin_b-32_(5) opaque-2-consensus
GST-P-site-0A GST-P-site-0B GST-P-GPS1 GST-P-FP-2 GST-P-FP-3 GST-P-GPS4
GST-P-FP-5 GST-P-FP-6 GST-P-FP-7 apoVLDLII-site_F_(6) apoVLDLII-site_D_(11)
IL2-TCEd AP-1-IL-2_(1) AP-1-IL-2_(2) TH2A-hexamer-site Apo-I-site_B_(15)
Apo-I-site_C_(13) ADR1-CTA1 AP-1-artificial_sequence_(1) albumin-site-eA
albumin-site-eB albumin-site-eC albumin-site-eD albumin-site-eE albumin-site-eF
albumin-site-eI albumin-site-eJ albumin-site-eK PHO8-site-2 CPC1-cpc-1
cpc-1-undefined-site CPC1-trp3 proenkephalin-B2 kappaE3-CRE LyF-1-Ig-kappa
UHF-1-EH4 UHF-1-LH4 PFK-2/FBPase-2-site-VI_(1) PFK-2/FBPase-2-site-VI_(2)
PFK-2/FBPase-2-site-V PFK-2/FBPase-2-site-IV PFK-2/FBPase-2-site-III NF-1-PFK-2/FBPase-2-site-II
NF-1/L-PFK-2/FBPase-2-site-I MHC_class_II_Ebeta-undefined-s PR-progesterone_receptor_(1)
PR-progesterone_receptor_(2) PR-progesterone_receptor_(3) PR-progesterone_receptor_(4)
mitochondrial-D-loop-site myc-CF1-c-myc_(2) myc-CF1-alpha-actin Oct-1-N-ras
gammaF-crystallin-CCR RAR-beta-ADH3 MLC-2-undefined-site EcR-consensus_(1)
Hb-en_(1) Hb-en_(2) Dfd-zein_storage_protein_22Z-1 Dfd-Dfd_(1) Dfd-Dfd_(2)
Dfd-Dfd_(3) MAS/EVE-D DENF1-eve Eve-EVE-P DENF2-eve DENF3-eve AP-1-DNA_polymerase_alpha
EIIaE-A-DNA_polymerase_alpha CP1-DNA_polymerase_alpha R1-Thy-1_(1) Sp1-Thy-1
CP1-Thy-1 R1-Thy-1_(2) Thy-1-FP-VIII MBP-1-c-myc BCFII-chorion_genes BCFI-chorion_genes
Sp1-AS_(1) Sp1-AS_(2) RVF-neu LAC9-cUAS stromelysin-undefined-site stromelysin-TRE/nRARE
c-jun-FP1 c-jun-FP2 ssARS-T-ARS307 NF-1-artificial_sequence C/EBP-proliferation-associated
CEBF-cTNT glutelin-core-site Yi-tk_(1) Yi-tk_(2) E-box-L-site-CS MyoD-MLC-B
MyoD-MLC-C chs-box-I chs-box-II chs-box-III TBP-P-element P-element-transposase-site
AP-1-artificial_sequence_(2) apoA-I-EpRE/ARE apoAI-IRCE histone_H4t-undefined-site
VITF-RS GATA-1-GATA-1_(2) GATA-1-FP-12 GATA-1-FP-11 GATA-1-FP-10 GATA-1-FP-9
GATA-1-FP-8 GATA-1-GATA-1_(3) GATA-1-FP-6 GATA-1-FP-5 GATA-1-FP-4 GATA-1-FP-3
GATA-1-FP-2 GATA-1-FP-1 Pit-1-TSHB_(1) Pit-1-TSHB_(2) nT3RE_(3) p53-MARE
NF-1-aP2 TCF-1alpha-TCR-alpha mdg1-minimal-promoter E-box+CArG3_box MP4-MMTV
MMTV-F2 MMTV-HRE-III epsilon-globin-undefined-site1 GATA-1-epsilon-globin_(1)
GATA-1-epsilon-globin_(2) epsilonF1-epsilon-globin Sp1-epsilon-globin CP1-epsilon-globin
epsilon-globin-undefined-site2 epsilon-globin-initiator gERE/_gastrin_EGF-reponse_elem
Sp1-vitellogenin_II RAP1-rpL16 IRF-1-IL-7R NF-1-tPA NGFI-A-C/EBP-site Sp1-C/EBP
C/EBP-C/EBP-alpha C/EBP-p21waf1/cip1 NF-IL6-IL-6 TAT-undefined-site-4 TAT-undefined-site-5
C/EBP-TAT_(1) HNF-3-TAT_(1) C/EBP-TAT_(2) C/EBP-TAT_(3) C/EBP-TAT_(4) HNF-3-TAT_(3)
TAT-undefined-site-6 TAT-undefined-site-7 C/EBP-TAT_(5) C/EBP-TAT_(6) C/EBP-TAT_(7)
HNF-3-TAT_(2) C/EBP-TAT_(8) C/EBP-E4 Yi-consensus TBP-MLP TBP-DHFR TBP-rpL32
TBP-IRF-1 TBP-CYC1 TBP-IVa2 GFAP-TATA_box HIV-1-LBP-site_II HIV-1-site_I
U6_snRNA-TATA_box YY1-P5_(2) YY1-P5_(3) c-Myb-pseudorabies_virus apoC-III-proximal_region/_B
Pit-1-CS-1_(1) Pit-1-CS-1_(2) T3R-CS-1 transferrin-DR0 MT-IF-MRE-d/MRE-c
MT-IG-MRE-e MT-IG-MRE-b ovalbumin-SDRE-region DHS_E_(3) DHS_B_(1) porphobilinogen-DHS_B_(2)
DHS_C_(1) DHS_C_(2) DHS_D_(1) DHS_D_(2) PGK-1-undefined-site-1 ENKTF-1-PGK-1
GATA-1-undefined-site-12 GATA-1-undefined-site-13 erythropoietin-undefined-site1
erythropoietin-OL-37 c-Myc-artificial_sequence-1 c-Myc-artificial_sequence-2
c-Myc-artificial_sequence-3 c-Myc-artificial_sequence-4 c-Myc-artificial_sequence-5
c-Myc-artificial_sequence-6 c-Myc-artificial_sequence-7 c-Myc-artificial_sequence-8
c-Myc-artificial_sequence-9 TFEB-artificial_sequence-1 TFEB-artificial_sequence-2
TFEB-artificial_sequence-3 distal_region_II/_H distal_region_II/_G distal_region_II/_F
distal_region_II/_E distal_region_II/_D proximal_region/_C proximal_region/_A
distal_region_I/_N GATA-1-gamma-globin_(4) HB1/HB2 GATA-1-GPB ER-progesterone_receptor_(1)
PR-progesterone_receptor_(5) PR-progesterone_receptor_(6) ER-progesterone_receptor_(2)
NF-kappaB-ELAM-1 AmdR-amdS AnCF-amdS TS-CIII TS-undefined-site-2 Sp1-TS_(2)
Sp1-BPV-1 HBP-1a-dbp HBP-1a-nitrate_reductase HBP-1a-legumin_A AR-prostatein_C3
Sp1-insulin_receptor COL1A1-undefined-site-2 alpha1-undefined-site-3 AP-1-TIMP
EcR-hsp23 MAPF1-MLC HAP1-CYB2 HAP1-consensus EMF1-XActin Oct-2-artificial_sequence
PD1-enhancer_E1 PD1-silencer_S1/_S2 NF-kappaB-gro-gamma E1A-E2F-motif GATA-1-EpoR_(2)
Sp1-EpoR PAI-2-undefined-site-1 PAI-2-CRE-element PAI-2-undefined-site-3
AP-1-PAI-2 PAI-2-undefined-site-4 Sp1-PAI-2 PAI-2-undefined-site-5 NBF-INO1_(1)
NBF-INO1 NBF-INO1_(2) Sp1-HTF9 uteroglobin-undefined-site-1 uteroglobin-undefined-site-2
uteroglobin-undefined-site-3 uteroglobin-undefined-site-4 uteroglobin-element-VI
uteroglobin-undefined-site-6 uteroglobin-undefined-site-7 uteroglobin-element-IV
uteroglobin-element-III uteroglobin-undefined-site-10 uteroglobin-element-II
uteroglobin-element-I SRF-cyr61 crystallin-HN_segment HCMV-18_bp_repeat_(2)
HCMV-18_bp_repeat_(3) HCMV-18_bp_repeat_(4) Sp1-junD junD-TRE Sry-beta-genomic-1
Sry-beta-genomic-2 Sry-beta-genomic-3 Sry-beta-genomic-4 Sry-beta-consensus
Sry-delta-genomic-1 Sry-delta-genomic-2 Sry-delta-genomic-3 Sry-delta-genomic-4
Sry-beta-genomic-5 Sry-delta-consensus CRE/enhancer_B_domain/BI DSXF-FBE/_B_(1)
DSXF-FBE/_B_(2) BRLF1-negative-element-1 BZLF1-negative_element alpha1-AGP-Ybox/Zbox
ssDBP-1-histone_H4 NF-muE1-IE_(1) Oct-1-IE NF-muE1-IE_(2) NF-muE1-IE_(3)
NF-muE1-IE_(4) NF-muE1-IE_(5) NF-muE1-IE_(6) IE-undefined-site EF-C-IE1
c-fos-undefined_site_(1) ATF-E4_(2) ATF-artificial_sequence_(1) ATF-artificial_sequence_(2)
ATF-artificial_sequence_(3) NF-1-betaM-globin AP-1-aldolase_A aldolase_A-undefined-site-1
aldolase_A-undefined-site-2 Sp1-aldolase_A sevenless-enhancer-FP-5 sevenless-enhancer-FP-6
sevenless-enhancer-FP-4 sevenless-enhancer-FP-3 sevenless-enhancer-FP-2
sevenless-enhancer-FP-1 dl-twi_(5) dl-consensus_(1) CD14-IRE NRF-2-ATP_synthase_beta-subuni
c-Ets-1-mb-1 BAF1-artificial_sequence CDP/Cut-gp91-phox-5' LF-B1-APN GATA-1-delta-globin_(2)
HBF-C_enhancer/_FPI HBV-C_enhancer/_FPII GATA-1-beta-globin_(4) CUP2-SOD1
HAP1-CYT1 XPF-1-amylase_2A_(1) XPF-1-amylase_2A_(2) USF-CS LyF-1-Ig-lambda-1
LyF-1-Ig-lambda-2 LyF-1-lck-1 LyF-1-lck-2 IgHV1-undefined-site-1 AP-1-IL-2_(3)
PR-artificial_sequence-1 GR-artificial_sequence_(1) chs15-G-box mmp-1_TRE
GR-artificial_sequence_(2) GR-alpha-2u_globulin_(1) GR-alpha-2u_globulin_(2)
GR-HIV-1 TAT-GRE GR-IL-6 IL-6-undefined-site TATA_box_(4) TATA_box_(5)
GR-osteocalcin PR-artificial_sequence-2 ovalbumin-box_D ovalbumin-box_A
ovalbumin-box_B ovalbumin-box_C LEF-1-PS2 SRY-SRY_(1) SRY-SRY_(2) SRY-artificial_sequence-1
SRY-artificial_sequence-2 SRY-artificial_sequence-3 MEF-2-artificial_sequence
MEF-2-cTNT MEF-2-alpha-myosin_hc1 MEF-2-alpha-myosin_hc2 MEF-2-myosin_heavy_chain
SRF-artificial_sequence-1 SRF-artificial_sequence-2 RSRFC4-consensus STE2*
Olf-1-OMP_(1) Olf-1-OMP_(2) Sp1-OMP_(1) Sp1-OMP_(2) Sp1-OMP_(3) Olf-1-consensus
Olf-1-OcNC U_box Olf-1-AC-III Olf-1-50.06 Olf-1-Golf HNF-3gamma-artificial_sequence
MNF1-35S_RNA MNB1b-35S_RNA MNF1-PEPCK GBF1-adh IF1-LpS1beta NF-muNR-prot_1
NF-muNR-prot_2 NF-muNR-prot_3 NF-muNR-prot_4 NF-muNR-consensus beta-1-beta-zein_gZ15A
SEF1-beta-conglycinin-site-1 SEF4-beta-conglycinin-site-1 SEF1-beta-conglycinin-site-2
SEF4-beta-conglycinin-site-2 SEF4-consensus SBF-1-consensus motif_I TAF-1-artificial_sequence
TAF-1-rbcS-611 DSC1-CDC9 CD28RC-IL-2 EBF-mb-1 EBF-MHC_class_II_Ia_Aalphad
ICP4-consensus phyA3-undefined-site-1 phyA3-undefined-site-2 phyA3-undefined-site-3
phyA3-undefined-site-4 phyA3-undefined-site-5 phyA3-undefined-site-6 phyA3-undefined-site-7
AS-C-ac pF13-artificial-sequence Egr-1-ADA NF-kB-SAA1-CRU CCBF-CLN2 TBF1-RS
BUF-HO abaA-yA_(1) abaA-abaA_(1) abaA-abaA_(2) abaA-abaA_(3) abaA-abaA_(4)
abaA-abaA_(5) abaA-brlA_(1) abaA-brlA_(2) abaA-brlA_(3) abaA-brlA_(4) abaA-wetA_(1)
abaA-wetA_(2) abaA-wetA_(3) abaA-wetA_(4) abaA-yA_(2) abaA-rodA_(1) abaA-rodA_(2)
abaA-rodA_(3) abaA-rodA_(4) abaA-rodA_(5) abaA-TMP1 abaA-brlA_(5) MLS1-undefined-site
YAP1-TRX2_(1) YAP1-TRX2_(2) cdt1-undefined-site-1 CDC10-cdt1 cdt1-undefined-site-2
GAL2-undefined-site AMT1-AMT1 BAF1-CHA1 hypoxic_CS INO2-artificial_sequence
Rox1-HEM13-4 PHO2-HO_(1) PHO2-HO_(2) NF-1-WAP NF-1-consensus E2F-E2-early_promoter
HNF-1-undefined-site IgHC-undefined-site-3 GATA-1-MC-CPA T3R-alpha-MBP
snRNP-E-hexamer-site-1 snRNP-E-hexamer-site-2 GR-ANF alpha1-undefined-site-4
C/EBP-artificial_sequence_(1) SKO1-SUC2 ATF-1-Igh-I-alpha Isl-1-somatostatin
Isl-1-somatostatin-2 CRE-BP1-TGF-beta2 TEF-TSH-beta_(1) TEF-TSH-beta_(2)
TEF-TSH-beta_(3) TEF-prl ODC-CRE2 RXR-alpha-HBV OL-12/T3RE Sp1-CS-B T3R-beta-EGF_receptor
NGFI-B-artificial_sequence RXR/RAR-ambiguous PPAR-3KAT USF-Vmw65 NF-1-tenascin
NF-1-alpha1_(2) NF-1-COL1A1 PRP-PHR1 c-Myb-HTLV-I_(1) c-Myb-HTLV-I_(2)
c-Myb-HTLV-I_(3) c-Myb-HTLV-I_(4) TFIID-ADA REB1-consensus tPA-undefined-site
fibronectin-undefined-site-1 Sp1-fibronectin AP-2-fibronectin fibronectin-undefined-site-2
C/EBP-artificial_sequence_(2) PU-artificial_sequence-1 PU-artificial_sequence-2
PU-artificial_sequence-3 PU-artificial_sequence-4 c-Ets-1-SC1 c-Ets-1-SC2
c-Ets-1-SC3 c-Ets-1-SC4 c-Ets-1-SC5 c-Ets-1-SC7 c-Ets-1-SC8 c-Ets-1-SC9
c-Ets-1-SC10 c-Ets-1-SC11 Elf-1-GM-CSF cytochrome_P-450b/e-undefined- delta-consensus
c-Myb-c-myb Ig-lambda-E2-4-PU.1-site Ste11-consensus v-ErbA-CAII p300-artificial_sequence
p53-artificial_sequence E4BP4-consensus snail-consensus dorsal-consensus_(2)
CREB-consensus CRE-BP1-consensus CREB2/c-Jun_RS GCN4-consensus v-Maf-artificial_sequence
NF-E2/MafK_consensus v-Maf-synthetic-site-11 HNF-1-prothrombin_(1) HNF-1-prothrombin_(2)
Ku-GRP78 PGK-1-undefined-site-2 GCR1-PGK GCR1-ENO1 GCR1-PYK1 GCR1-ADH1
MIG1-GAL1-10 MIG1-GAL3 MIG1-GAL4 MIG1-MEL1 MIG1-MAL2R MIG1-MAL61-62_(1)
MIG1-MAL61-62_(2) MIG1-MAL63 MIG1-FBP1 MIG1-PDC1 MIG1-HAP4 MIG1-FPS1 E47-artificial_sequence
CP2-alphaA-globin_(1) CP2-alphaA-globin_(2) CP2-alphaA-globin_(3) CP2-alphaA-globin_(4)
CP2-consensus NP-TCII-SV40 NP-TCII-consensus MAF-alpha-lactalbumin MAF-BLG
GATA-1-gamma-globin_(5) GATA-1-gamma-globin_(6) CSBP-1-gamma-globin gamma-globin-undefined-site-4
CP1-gamma-globin_(3) GATA-1-gamma-globin_(7) TRF-artificial_sequence GAL4-artificial_sequence_(2)
MEF-2-PGAM-M ISG54-undefined-site AGP1-URE BOX-DNA CBF-hsp72-CCAAT NF-Y-consensus
CP2-CAAT CACCC-box_CS TCR-Vbeta8.1-CACCC-box-2 CF2-site connexin32-B2_element
COUP/EAR_CS CTC-element-1 DBP_site delta-EF1-site doublesex-site epsilon-PRE-II
E2-box kappa-E2_CS2 ICE_CS EBF/Olf-1_site EBF/Olf-1_site_2 ELP/SF1/FTZ-F1_site
EP_site Elk_CS2 c-myc-FUSE HFH-1_CS Fkh/HNF-3-subclass-CS Fos-basal-promoter-element
G-box/CA-element G-box/CA-element-2 Wnt-1-GC-box Giant_site Gli_site Grainyhead_site
PDGFA-TCC-motif Hen1_site HGF_repressor_site E2A-HLF_CS HMG-I(Y)-AP1-3
HNF-3-IRS-CS antp/en_homeodomain_site bicoid_site CPD/Cut-gp91-phox paired_CS
paired-Q9-CS IL-2/NRE-A optimal-Inr-sequence IRE-A_(3) IRE-A_(2) ISRE/VRE/PRDI_CS1
IRF-E J/S-element-CS K5_promoter_element Knirps_site ELA1-B-element-L-site
LPL-LSE6 LR1_CS LyF/Ikaros_site M_box_core_motif Maf-site-1 MRS-part-1
X-box X-box_(2) MD-consensus MBSI MBSII Myc/Max_CS MEF-2_CS2
MyTI-PLP MZF1-site-1 MZF1-CS NFE2/maf_CS NF-kappa-B_site NRF1_site NRF2_site
ROR-alpha1-CS p53_response_element Pax2/5/8_site PBX_consensus Runx_CS
PGBE PCE PSE-CS Spi-1/PU.1_CS PuF_site RCE_conserved_sequence
RARE/DR5_CS RARE/DR5_CS2 RVL3_B_domain S8_site serendipity_site CARG/SRE_site
Skn-1_CS Snail/Slug_CS Sprm1_site SSAP_site ADD1/SREBP_site tailless_site
Tat_site TCF/TPF_sites TFE3_site TSE/TRE/DR4_(1) TSE/TRE/DR4_(2) tramtrack_site
TTF2_site VDRE/DR3_site XRE JCV-B-1 Z_box Z_box_(2) NF-kB-idealized-site
CREB-chromogranin-B CREB-synapsin-I CREB-LDH CREB-aromatase CREB-fibronectin-2
STAT4-binding-site recA-positive-element NF-kB-PTX3 Sp1-Ku80_(1) Sp1-Ku80_(2)
AP-2-PD-1 nm23-H2-PD-1 Myc/max-PD-1 Pu.1-PD-1 CREB-secretogranin AP-2-MIP-A-1
AP-2-MIP-2 NF-Y-MHC-II-Ea NF-Y-MHC-II-EaY' NF-Y-MHC-Dra NF-Y-Dra-Y' NF-Y-MHC-11-Aa
NF-Y-MHC-11-Dqa NF-Y-MHC-11-Dpa NF-Y-MHC-11-Rb NF-Y-MHC-11-Drb NF-Y-MHC-11-Ab
NF-Y-MHC-11-Dqb NF-Y-MHC-11-Dpb NF-Y-MHC-11-Dpb-2 NF-Y-MHC-11-B-Lb NF-Y-Ii-P
NF-Y-Ii-D NF-Y-Ii-D-2 NF-Y-Mig NF-Y-GP-91-phox NF-Y-CD10 NF-Y-RAG-1 NF-Y-IL4-D
NF-Y-IL4-P NF-Y-IL4-P-2 NF-Y-Thy-1 NF-Y-Globin-alpha-1 NF-Y-Globin-alpha-2
NF-Y-Globin-alpha-3 NF-Y-Globin-alpha-4 NF-Y-Globin-alpha-5 NF-Y-Globin-zeta
NF-Y-Globin-gamma-D NF-Y-Globin-gamma-D-2 NF-Y-Globin-gammaD-3 NF-Y-Globin-gammaP-1
NF-Y-Globin-gammaP-2 NF-Y-Globin-gammaP-3 NF-Y-Globin-rho-3'E NF-Y-Coll-alpha2(I)
NF-Y-Coll-alpha-2(I)-2 NF-Y-Coll-alpha1(i) NF-Y-Osteopontin NF-Y-BSP NF-Y-Albumin
NF-Y-Albumin-2 NF-Y-Albumin-3 NF-Y-Albumin-4 NF-Y-ApoA-I NF-Y-Aldolase-B
NF-Y-Aldolase-B-2 NF-Y-Aldolase-B-3 NF-Y-TAT-P NF-Y-TAT-D NF-Y-gamma-GT
NF-Y-SDH NF-Y-Fibronectin NF-Y-Arg_Lyase NF-Y-Factor-VIII NF-Y-Factor-X
NF-Y-MSP SMP1_CS NF-Y-ALDH NF-Y-ALDH-2 NF-Y-ALDH-3 NF-Y-LPL NF-Y-LPL-2
NF-Y-LPL-3 NF-Y-ExoKII-D NF-Y-HexoKII-P NF-Y-FAS-P NF-Y-FAS-P-2 NF-Y-FAS-P-3
NF-Y-FAS-P-4 NF-Y-FAS-D NF-Y-FAS-D-2 NF-Y-FAS-D-3 NF-Y-TSP-1 NF-Y-FGF-4
NF-Y-FGF-4-2 NF-Y-alpha-1-chim INO2_RS_(ISRE) AP-2-alpha_CS lambda_boxA
WT1-artificial-site EGR1-high-affinity-site WT1-high-affinity-site NGFI-B-CYP21
SF-1-CYP21 CK-2-CYP21 TRF-binding-site AFT1_CS NF-Y-tr.hydr NF-Y-NakATPsea-3
NF-Y-PDGF-beta NF-Y-FerH NF-Y-MHC-IA2-B8 NF-Y-MCH-IA2-Cw2Ld NF-Y-MHC-IA2-B7
NF-Y-MDR1 NF-Y-MDR1-2 NF-Y-CYP1A1 NF-Y-c-Jun NF-Y-Grp78 NF-Y-Hsp70-P NF-Y-Hsp70-P-2
NF-Y-Hsp70-P-3 NF-Y-Hsp70-P-4 NF-Y-Hsp70-D NF-Y-Hsp70-D-2 NF-Y-ADH2 NF-Y-GPAT
NF-Y-FPP-D NF-Y-FPP-P NF-Y-HMG NF-Y-HSS NF-Y-SREBP2 NF-Y-GST28 NF-Y-GST-28-2
NF-Y-GHR NF-Y-CP2 NF-Y-CP2-2 NF-Y-beta-actin NF-Y-beta-actin-2 NF-Y-beta-actin-3
NF-Y-TK-D NF-Y-TK-D-2 NF-Y-TK-P NF-Y-TK-P-2 NF-Y-TK-P-3 NF-Y-Topo-II-alpha-I
NF-Y-Topo-II-alpha-I-2 NF-Y-Topo-II-alpha-I-3 NF-Y-Topo-II-alpha-II NF-Y-Topo-II-alpha-II-2
NF-Y-Topo-II-alpha-II-3 NF-Y-Topo-II-alpha-III-1 NF-Y-Topo-II-alpha-III-2
NF-Y-Topo-II-alpha-III-3 NF-Y-Topo-II-alpha-IV NF-Y-Topo-II-alpha-IV-2
NF-Y-Topo-II-alpha-IV-3 NF-Y-cdc25-3 NF-Y-cdc25-2 NF-Y-cdc25-1 NF-Y-cdc2-1
NF-Y-cdc2-1-2 NF-Y-cdc2-1-3 NF-Y-cdc2-2 NF-Y-cdc2-2-2 NF-Y-cdc2-2-3 NF-Y-Cyc1A
NF-Y-Cyc1A-2 NF-Y-Cyc1B1-D NF-Y-Cyc1B1-P NF-Y-E2F1-P NF-Y-E2F1-P-2 NF-Y-PLK
NF-Y-RRR2 NF-Y-HisH2B-D NF-Y-HisH2B-P NF-Y-HisH2B-D-2 NF-Y-HisH2B-P-2 NF-Y-HisH3.3
NF-Y-HisH3.3-2 NF-Y-HBV-S NF-Y-MSV-LTR NF-Y-RSV-LTR-P NF-Y-RSV-LTR-D NF-Y-ev2-RAV0
NF-Y-Ad-EIIl-II NF-Y-Ad-ML NF-Y-CMV-gpUL4 NF-Y-HSV-IE110K NF-Y-VZV-ORF62
NF-Y-MVM-P4 AncP-AmdS AnCP-TaaG2 AnCP-GatA AnCP-TaA HAP-2/3/5-CYC1UAS2
HAP-2/3/5-CIT1 HAP-2/3/5-COX6 HAP-2/3/5-CYT1 HAP-2/3/5-LPD1 HAP-2/3/5-COX5a
HAP-2/3/5-HEM1 HAP-2/3/5-ASN1 HAP-2/3/5-NADPG1.Deh. HAP-2/3/5-SOD2 epsilon-Globin-CCAAT
beta-globin-CCAAT beta-Globin-CCAAT-2 beta-Globin-CCAAT-3 GP91-phoxP-CCAAT
IL4-P1-element TopoII-alpha-V-CCAAT Topo-II-alpha-V-CCAAT-2 Fc-gamma-Rec1-CCAAT
Carboxyest-CCAAT CD14-CCAAT HSV-TK-CCAAT INO4-CS CUP1_UAS SKO1_RS HSF1_CS
HSF1_CS2 ROX1_CS Pho4p-RS-type-1 Pho4p-RS-type-2 SMP1-CS MAC1_RS PDR3_CS
ROX3_regulatory_element REB1_RS PHO4_RS LEU3_CS RLM1_CS PPR1_CS MET31/32_RS
enkephalin-upstream-site NF-Y-Topo-II-alpha-III RFX1-artificial-site NRSE
NRSE1 NRSE2 BDNF-CRS-I Est-vWF_site ExsA_CS_(1) paired_CS1 paired_CS2
AB1-core-element-A AB1-core-element-B XGRAF_RS Brn-3_RS Xbp1_CS conRTRE-CS
RTR-core-motif Msx1_CS CSRE_CS1 Elf-1-CS CYS-3_RS CYS-3_CS P2-promoter-US-1
P2-promoter-US-2 Lyl1/E2a_heterodimer_CS HNF-6_CS WIN_CS HFH-4_CS1 HFH-4_CS2
RAP1_RS hTBP-artificial-site HSF-calreticulin ESF-1_RS HCRE_core_sequence
GmAux28-1/Hex GmAux28-G-box GmAux-delta-1 GmAux-delta-4 Msx-2-OC mtRNAP-variant-RS-1
mtRNAP-variant-RS-2 mtRNAP-variant-RS-3 mtRNAP-variant-RS-4 mtRNAP-variant-RS-5
mtRNAP-variant-RS-6 mtRNAP-variant-RS-7 mtRNAP-variant-RS-8 mtRNAP-nonanucleotide-RS
carP-carAB CRP-gcd b0327-upstream_site Fur-fep Frn-hrsA CRP-b1036 b1112-upstream-site
IHF-pspA rspA-unknown-site b1776-upstream-sites CRP-flhD CRP-cdd CRP-yffE
CRP-gut IHF-yjdG CRP-ppiA yhiP-upstream-site CRP-mtlA yiaK-upstream-site
yidX-upstream-site Fnr-kdgT yihU/yihV_upstream_site CRP-proP HNF-4-DR2-4.3
HNF-4-DR2-4.8 HNF-4-DR2-5.7 HNF-4-DR2-5.11 HNF-4-DR1-4.1 HNF-4-DR1-4.2
HNF-4-DR1-4.4 HNF-4-DR1-4.5 HNF-4-DR1-4.6 HNF-4-DR1-4.7 HNF-4-DR1-4.10
HNF-4-DR1-5.1 HNF-4-DR1-5.2 HNF-4-DR1-5.4 HNF-4-DR1-5.5 HNF-4-DR1-5.6 HNF-4-DR1-5.8
HNF-4-DR1-5.9 HNF-4-DR1-5.12 HNF-4-DR1-5.13 HNF-4-DR1-5.14 HNF-4-DR1-5.16
HNF-4-DR1-5.17 rps3a-1-homol-D rps3a-2-homol-E rps3a-2-homol-D rps5-homol-E
rps5-homol-D rps6-1-homol-D rps7-homol-D rps8-homol-D rps9-homol-E rps9-homol-D
rps10-homol-E rps10-homol-D rps11-homol-E rps11-homol-D rps12-homol-D rps13-homol-E
rps13-homol-D rps14-homol-E rps14-homol-D rps17-homol-E rps17-homol-D rps15a-1-homol-E
rps15a-1-homol-D rps15a-2-homol-D rps23-homol-E rps23-homol-D rps28-homol-D
rps30-homol-D rp13-1-homol-E rp13-1-homol-D rp13-2-homol-D rp14-1-homol-E
rp14-1-homol-D rp15-homol-D rp17-1-homol-E rp17-1-homol-D rp17-2-homol-D
rp17a-1-homol-E rp17a-1-homol-D rp18-1-homol-D rp18-2-homol-D rp18-3-homol-E
rp18-3-homol-D rp19-homol-E rp19-homol-D rp110-homol-D rp111-homol-E rp111-homol-D
rp113-homol-E rp113-homol-D rp117-homol-E rp117-homol-D rp118-homol-E rp118-homol-D
rp122-homol-E rp122-homol-D rp123-homol-D rp123a-homol-E rp123a-homol-D
rp124-homol-E rp124-homol-D rp126-homol-E rps126-homol-D rp127a-1-homol-D
rp127a-2-homol-E rp127a-2-homol-D rp128-homol-D rp130-homol-E rp130-homol-D
rp132-1-homol-D rp132-2-homol-D rp138-homol-D rpaP1-1-homol-E rpaP1-1-homol-D
rpaP1-3-homol-E rpaP1-3-homol-D rpaP2-2-homol-E rpaP2-2-homol-D rp-homol-E-CS
rp-homol-D-CS rpa-homol-E-CS rpa-homol-D-CS UOX-CRE ExsA_CS_(2) AP-2_CS7
Eno1-RPG forkhead_CS2 E2F-6_RS BRE Smad3/Smad4_RS hFAST-1-ARE p62TCF_binding_site
Smad3-SBE Smad3-SB Ets-1/GABP-hTBP DMP1_CS ovalbumin-NRE-sequence Chirp-I_site
Abf1-SPT15 ZmHox2a_HD1_CS ZmHox2a_HD2_CS Hcm1p_CS HoxA-5-Smad4 Hyko-1
Hyko-2 Hyko-3 Hyko-4 Hyko-5 Hyko-6 Hyko-7 Hyko-8 Hyko-9
Hyko-10 Hyko-11 ATF3/Jun_element E2F4/DP_consensus pdhR_operator HNF-1-CS
Meis-Hoxb1-ARE Meis-Hoxb2-r4 CBF1_CS gamma-interferon-BED YY1-gamma-interferon-BED
NFAT-gamma-INF AP-1-gamma-INF NifA_site_(1) NifA_site_(2) Sp1-tyrosinase
vHNF-1-DR-1 m4-AP-1_site NF-kB-vimentin NF-IL6-vimentin Ren1c-PPE NF-kB-E-selectin_(1)
NF-kB-E-selectin_(2) NF-kB-E-selectin_(3) E2F_site_(2) HNF-1-guanylin OL1_repressor_site
OL3_repressor_site GHF1/Pit1-prl_(1) GHF1/Pit1-prl_(2) GHF1/Pit1-prl_(3)
GHF1/Pit1-prl_(4) GRE-prl GHF1/Pit1-prl_(5) GHF1/Pit1-prl_(6) GHF1/Pit1-prl_(7)
GHF1/Pit1-prl_(8) CPRF1-CPRF1 MarR-marR_(1) MarR-marR_(2) Sp1-XIST_(1)
YY1-XIST Elf-1_site NIP_site NF-IL3_site CD28/_CK1_site CK1_site CK2/_GATA3_site
AP-2-IL-3 RAP1-PDC_(1) RAP1-PDC_(2) RAP1-PDC_(3) RAP1/GCR1-PDC Q9-ISRE
pax6-Rh5 Sp1-Ku80_(3) Oct3-Ayu1 HNF-3-HNF3-alpha UF1-H3beta-HNF3-1 TTF1-HNF3alpha-1
KF-HNF3-alpha NF-1-HNF3-alpha_(1) TTF1-HNF3alpha-2 HNF-4-HNF-1 MT-I-MRE-e
MT-I-MRE-d MT-I-MRE-c MT-I-MRE-b MT-I-MRE-a HNF-1-XORF HNF-1-HBV HNF-1-HBV_(2)
HNF-1-XORF_(2) HNF-1-XORF_(3) Myb-tom-1A_(2) C/EBP-tom-1A Myb-tom-1A_(3)
Bicoid-GATA-1_(1) GATA-1-gamma-IRE Bicoid-GATA-1_(2) GATA-1-gamma-IRE-2
GABP-COXVb Sp1-COXIV Ets-COXIV-1 Ets-COXIV-2 NF-1-COX10 Sp1-COX10_(1) Sp1-COX10_(2)
Sp1-COX10_(3) Sp1-COX10_(4) COXIV-Sp1-repeats Pu1/SpiB-PD-1 90K-IRF-E C/EBP-obese
CaFA_site Shh-RARE-hs1 Shh-RARE-hs2 HNF-3b-Shh_(1) HNF-3b-Shh_(2) goosecoid-brachyury
Sp1-Vdac1 Sp1-Vdac2 AP-2-phospholipase_C_gamma1(1) AP-2-phospholipase_C_gamma1(2)
AP-2-phospholipase_C_gamma1(3) AP-2-phospholipase_C_gamma1(4) AP-2/Sp1-PLG
AP-2-phospholipase_C_gamma1(5) AP-2-phospholipase_C_gamma1(6) AP-2-phospholipase_C_gamma1(7)
AP-2-phospholipase_C_gamma1(8) AP-2-phospholipase_C_gamma1(9) SP1/AP2-phospholipase_C_gamma
AP2/_Sp1-VGF_(1) IL6RP-VGF_(1) IL6RP-VGF_(2) Sp1-VGF_(2) AP-2-VGF_(1) AP-2-VGF_(2)
AP-2-VGF_(3) AP-2-VGF_(4) AP2/_Sp1-VGF_(2) AP-2-VGF_(5) AP-2/Sp1-VGF_(1)
NF-KB-VGF AP-2_VGF AP-2/Sp1-VGF_(2) AP2GC_VGF_(1) Sp1_VGF AP2GC_VGF_(2)
AP-2-thrombomodulin AP-1-thrombomodulin C/EBP-cyclinD2 AP-1-cyclinD2 AP-2-cyclinD2_(2)
LEF1-Tabby CREB/ATF-gamma-PPT p53-14-3-3-sigma Sp1-prosaposin prosaposin-RORE
AP1HLH-rpIgR HNF-1-SGLT1 Rh50-Ets-1 Rh50-Ets-2 RAP1_site PU1/Spi1-macrosialin
PurR-purC-1 PurR-purC-2 E2F-E2F-1 GATA1-Bfsp1 Sox2-Bfsp1 AlphaCE2Maf-Bfsp1
NFE1-GPC Ets-WASP Ets/c-Rel-WASP Ets/cRel/PU1-WASP Tcf-matrilysin NF-Kb-p62
NF-Kb/Ets1-p62 AP-2-p62_(1) c-Myc-p62 Ets1-p62 MBF-p62 C/EBP-p62 NF1-p62
AP-2-p62_(2) Sp1-p62 Sp1-a1p-inhibitor_(1) Sp1-a1p-inhibitor_(2) Sp1-a1p-inhibitor_(3)
Sp1-a1p-inhibitor_(4) Sp1-a1p-inhibitor_(5) Sp1-a1p-inhibitor_(6) Sp1-a1p-inhibitor_(7)
Sp1-a1p-inhibitor_(9) Smad4-JunB hREN-CRE AniA-upstream-region FNR-AniA
STAT-beta-5-integrin STAT-beta-5-integrin-2 Rb-CAMLG ANF-CAMLG ANF/p53-CAMLG
bicoid-CAMLG Ets-1-Octa-1 Ets-1-Octa-2 bHLH-Mlsn1 Ets1-Fgf8 Msx2-Fgf8 CTCF-GAGA_site
HiNF-A-CTCF GATA-CTCF-1 GATA-CTCF-2 CTCF-Ebox_site Myb-CTCF CTCF-2Xocta
NF-1-CTCF Ets-CTCF-1 Ets-CTCF-2 CTCF-Ebox/CRE_site E2F-CTCF-1 INR/YY1/TFII-I-CTCF
E2F-CTCF-2 NF-kappaB-APP AP-2-APP AP-1-IHABP E2F-muCdc7-1 E2F-muCdc7-2
GATA-2-muCdc7 E2F-muCdc7-3 E2F-muCdc7-4 E2F-muCdc7-5 AP-2-HADHSC_(1) AP-2-HADHSC_(2)
AP-2-HADHSC_(3) Sp1-calpain_(1) Sp1-calpain_(2) Sp1-calpain_(3) IHF-nifH
AP-1-IL-1 AP-1-GAD67 cyclin-D2-prolactin-RE AP-1-CCR1-2 c-Myb/NFIL6-CCR1
Sp1-CCR1 NF-IL6-CCR1_(1) NF-kappaB-CCR1_(1) NF-IL6-CCR1_(2) AP-1-CCR1-1
NF-kappaB-CCR1_(2) alphaPal-EIF2S2 AP-1-TBXAS1 PEA-3-TBXAS1 AP-2-TBXAS1
PEA3-TBXAS1-2 AP-1-TBXAS1-2 PEA3-TBXAS1-3 D2R-RARE p107-E2F_site TFEC-PU.1-site-1
TFEC-PU.1-site-2 TFEC-PU.1-site-3 TFEC-PU.1-site-4 MyoD_site NF-kB-A1 Sp1-alpha-dystrobrevin_(1)
Sp1-alpha-dystrobrevin_(2) CreA_site_(1) CreA_site_(2) CreA_site_(3) CreA_site_(4)
AreA-hxB_(1) UaY-hxB_(1) UaY-hxB_(2) UaY/AreA-hxB AreA-hxB_(2) sigma22-algD
NF-kappaB-MMP9 Sp1-c-jun_(2) CTF/NF1-CF1-1 CTF/NF1-CF1-2 AP-1-CF1 AP-2/Sp1-CF1
CTF/NF1-CF1-3 AP-1-c-jun-2 CREB/ATF-c-jun Sp1-CD53 IL2R-PEA-3 IL2R-GT-box
IL2R-Ets hGamma-C-EBS mGamma-C-EBS NF-kB-galanin_(1) NF-kB-galanin_(2)
AP-2-mEH TTF-TPO-1 TTF-TPO-2 TTF-TPO-3 TTF-TPO-4 LFA1-albumin eHTF-albumin
HNF-1-albumin_(1) AP-2-p68-c-rel NFLB-p68-c-rel NFLB/_HIP1-p68-c-rel AP-1-involucrin-H2
AP-1-involucrin_2 AP-1-involucrin_3 HNF5-erk1 p53-erk1_(2) NF-IL6-erk1_(1)
NF-IL6-erk1_(2) Ets1-erk1 p53-erk1_(1) Myb-erk1 AP-2-erk1 AP-1-erk1 CTF/NF1-erk1
Sp1-erk1_(2) STAT6-gamma-IRE STAT5-gamma-IRE STAT4-gamma-IRE STAT1-gamma-IRE
STAT1-gamma-IRE-2 STAT1-gamma-IRE-2.2 gamma-interferon-T-box AP-2-gamma-IRE-BE
MCB SCB_(3) M14a M14b ECB M1a M3a M3b
M4 M5 M13 M26 M27 ABF1_CS2 AP-1_CS5 BAS2_consensus
CuRE_site CSRE_CS2 SCB_consensus GC/FAR_site_(1) HSTF_consensus_(1) HSTF_consensus_(3)
HSTF_consensus_(4) LEU3_consensus MCM1_consensus MAT-alpha-2_consensus
NBF_consensus PDR3_consensus PPR1_consensus PUT3_consensus ROX1_consensus
RME1_site repressor_of_CAR1_consensus T4C_consensus TEA1_consensus URSPHR_consensus
UASRAD_consensus UASINO_consensus SFF_consensus VDR-phospholipase_C_gamma_1
PBF-HBVI c-Myb_CS2 NGFI-A_CS Sil-B TSEP-1_site OSE1 HBV_ENII_B1
ATPA-E-box_element phyA3-RE1 CNTF_response_element_1 CNTF_response_element_2
PIRE PINA-E4 PINA-E7 PINA-E6 PINA-E5 PINA-E3 PINA-E2 PINA-E1
NAT-E3 NAT-E2 NAT-E1 HIOMT-A-E4 HIOMT-A-E3 HIOMT-A-E2 HIOMT-A-E1
HIOMT-B-E3 HIOMT-B-E2 HIOMT-B-E1 c-Myb_9bp_motif c-Myb-c-Erb-B2 c-Myb-c-Erb-B2_site_I
c-Myb-c-Erb-B2_site_2 c-Myb-c-Erb-B2_site_3 c-Myb-c-Erb-B2_site_4 c-Myb-c-Erb-B2_site_5
c-Myb-c-Erb-B2_site_6 Z[alpha]_binding_site ARE_PPRE TR2-aldolase-A HNF-3-element-N1
oct-element_N1 FAAR-PPRE PCE-2 Pbx-PSE_WT E2A-Pbx1_RS Hox/Pbs_RS Hox/Pbx_RS2
En/Pbs_RS CBF/CBPa-MCSFR CBFA2-MCSFR C/EBPa-MCSFR NFE3-gamma-globin-distal-CCAAT
TAK1-RE NF-CD4_RS NRF-1-cyt_c LDL-FP1 O/E-1_CS Roaz-9H2 Roaz-9H5 Roaz-9H11
Roaz-9H14 Roaz-9H7-1 Roaz-9L4 Roaz-9L5 Roaz-9L6 Roaz-9L10 Roaz-9L12 Roaz-9L15
Roaz-9l17 Roaz-9L18 SDI-A1 MyEF-3_RS alpha-globin-CCAAT HBV-B1-element
EKLF-beta-globin chkYB-2_RS PPAR-rAOX PPAR-rBifunctional_enzyme PPAR-rFABP
PPAR-CYP4A6 PPAR-rHMG-coA-synthase PPAR-rMalic-enzyme PPAR-rApo-CIII PPAR-hApo-CIII
PPAR-hTransferrin PPAR-hTf-PRI NCAM-site-a TPO-UFB Rox1-ANB1-1 Rox1-ANB1-2
Rox1-ANB1-3 Rox1-ANB1-4 Rox1-ROX1-1 Rox1-ROX1-2 MHC-EM H1t-GC-box-2 beta-globin-Inr
MCP-1-kappaB-1 MCP-1-kappaB-2 Sp100-ISRE ISG15-ISRE_(1) NFAT-FasL IL-9-PW2
NF-kB-IL-9 IL-9-CRE NFAT:AP-1_RS NFAT:AP-1_RS2 GPIX_GATA_site H4TF-1-FVII
HNF-4-FVII C/EBP-beta-FVII TNF-kappa3/CRE Egr-1/Krox-24-TNF-alpha GATA-3-IL-5
IL5-CLE1 IL5-G1-GATA TCR-alpha-GATA FKHRL1-FasL Ets/p53-p21 AldA-NRE-M3
p97-AldA-NRE NF-kB-MMP-9 NF-kB-FasL-kB1 NF-kB-FasL-kB2 NF-AT-FasL FEF-c-fes
PU.1-CXCR1 gp130-SBE c-fos-SIE RNR2-E2Fa RNR2-E2Fb/CDE GH3-AuxRE-D1 CYM-MSA
MSA_CS tyrD_US tyrD-URR gastrin-cis-regulatory-sequenc gastrin-AT-rich-site
gastrin-CACC-site gastrin-CACC CLC-GA-element YY1-involucrin-1 YY1-involucrin-2
involucrin-distal-element HIV-T3RE MRF-CMV-1-1 MRF-CMV-1-2 SRF-CArG-box-2
SRF-CArG-box-1 SV40-distal_site osZIP-1a-Em1a osZIP-1a-Em1b osZIP-1a-Em1c
EmBP-1-Em1a-1 EmBP-1-Em1a-2 EmBP-1-Em2a-1 EmBP-1-Em1b-2 EmBP-1-Em1c EmBP-1-Em1c-2
EmBP-1-Em1d-1 EmBP-1-Em1d-2 EmBP-1-Em2a EmBP-1-Em2a-2 REB-RS Atmyc1-Sph-box
VP1-C1 C1-ABA-element CAII-CS Nkx-2.5-GATA-6 CUP-GTbox-C/EBP-alpha C/EBP-alpha-TRE-1
Sp1-C/EBP-alpha p53-p21waf1/cip1 p21-TGF-beta-response_element BRLF1-negative-element-2
HLA-B7-ISRE ISG15-ISRE_(2) 6-16-ISRE_(1) mt-beta-LCK lck-repressive-element
osteocalcin-minimal-VDRE VDRE-augmenting-sequence chitinase-EIRE X1-GCC-box
CD44-ERE mSM22-alpha-TCE Evi-1-D1-CONS Evi-1-D2-CONS FN-GCE-A FN-GCE-B
ChORE_CS v-Maf-synthetic-site-2 CD155-FPII CD155-FPI NF-kB-CD155 EGFR-p53RE
CaRE-1 FAC1-FBE GL2-Myb-binding-site Rox1-HEM13-1 Rox1-HEM13-2 Rox1-HEM13-3
Rox1-AAC3-1 Rox1-AAC3-2 tenascin-TCE HMG-CoA-synthase-SRE-1 HMG-CoA-reductase-E-box
HMG-CoA-reductase-SRE_(1) SREBP-LDL-receptor-SRE-1 HMG-CoA-reductase-SRE_(2)
HMG-CoA-synthase-SRE-1-3-prime HMG-CoA-synthase-SRE-1-5-prime Oct-1-Ly6E/A
AP-2-EGFR-site-2 AP-2-EGFR-site-3 AP-2-EGFR-site-4 AP-2-EGFR-site-5 AP-2-EGFR-site-6
Sp1-ACCA Sp1-ACCA-2 HBP-1_CS H3-type-I-element 35SRNA-Site-2 35SRNA-Site-3
cTNT-M-CAT cTNT-M-CAT-2 beta-MHC-M-CAT-1 beta-MHC-M-CAT-2 beta-MHC-M-CAT-3
beta-MHC-M-CAT-4 alpha-MHC-M-CAT-1 alpha-MHC-M-CAT-2 MLC-2-M-CAT s/cTNC-M-CAT
VSM-alpha-actin-M-CAT skin-alpha-actin-M-CAT-1 skin-alpha-actin-M-CAT-2
AChR-beta-M-CAT PGAM-M-M-CAT c-mos-M-CAT-1 c-mos-M-CAT-2 AE3-channel-M-CAT
rBNP-M-CAT hBNP-M-CAT SIS-SPE TEF-4-CCT-alpha-Eb AtTRP1_RS_motif RTBP1_RS_motif
IBP1-RS BPF1_RS AtTRP1-AtTRPro glycine_response_element_CS DR4-TRE DR5-TRE
DR1-TRE CSEn2-FP1 CSEn2-FP2 CSEn2-FP3 CSEn2-FP4 CSEn2-FP5 CSEn1-DR.1 CSEn1-DR.2
prolactin-composite-element MORE PORE Ig-MORE IL-4-CPRE CDP/Cut-HLA-B7-1
CDP/Cut-HLA-B7-2 HLA-B7-repressor DBH-domain-I-2 DBH-domain-II-2 DBH-domain-III-2
DBH-PRS1 Probasin-ARE-1 Probasin-ARE-2 PSA-ARR PSA-ARE AR-KLK2 AR-C3-(Intron-1)
AR-C1 AR-Slp-1 AR-Slp-2 AR-Slp-3 AR-6-PF-2K-1 AR-6-PF-2K-2 AR-Factor-IX
AR-JRE AR-aldose-reductase AR-GUS hAR-ARE1A hAR-ARE2 AR-MMTV-distal
AR-MMTV-proximal HNF-6-r.hnf-3beta HNF-6-m.ttr HNF-6-r.pfk-2 HNF-6-r.pfk-2-GRUc
HNF-6-m.hnf-4 HNF-6-r.pepck HNF-6-r.alpha2-ug HNF-6-r.cyp2c13 HNF-6-r.cyp12c12
HNF-6-m.mup HNF-6-r.tog HNF-6-r.alpha-fp CSRE_CS MElk-CS POX1-UAS1 Sry-CS
Sox5-CS Sox17-CS Sox9-CS ECI-6/IkappaB-alpha-BS6 ECI-6/IkappaB-alpha-BS3
ECI-6/IkappaB-alpha-BS7 ECI-6/IkappaB-alpha-BS1 ECI-6/IkappaB-alpha-BS8
ECI-6/IkappaB-alpha-BS5 ECI-6/IkappaB-alpha-BS2 ECI-6/IkappaB-alpha-BS4
FATP-PL3 ZRE-B-protoenhancer IL-3-NIP-AP-2-site IL-3-NIP_(2) v-ErbA-consensus
COUP-TF-RE SPRE p53-MDR1-HT MDR1-HT-p53-site-1 MDR1-HT-p53-site-2 c-Myb-RRBE
TFII-I-TSSC RSV-TSSC MSEi M-box Stat92E-da Egr-1-MT1-MMP HNF-3-TTR_(2)
FHX-type-B-site FHX-hC4BPA FHX-type-A-CS rMT-III-motif-2 ceMT-I-motif-6
rMT-III-motif-7 rMT-III-motif-8 rMT-III-motif-9 ceMT-I-motif-11 pMT-motif-12
PTTG-Element-A PTTG-Element-B PTTG-Element-C mSI-SIF3 SIF4 MMP9-GT-box
PAI-site-2 PAI-site-4 PAI-site-5 PAI-forkhead-site PBX-PDX1-somatostatin
epsilon-NRB-FP1-human epsilon-NRB-FP1-galago epsilon-NRB-FP1-rabbit epsilon-NRB-FP1-mouse
epsilon-NRA-FP2 epsilon-NRA-FP3 epsilon-NRA-FP4 epsilon-NRA-FP5 Pax-6_RS
Pax-6-PD-CS Pax-2-PD-CS Pax-2/5/8-PD-CS NF-kB-TNF-alpha-873 NF-kB-TNF-alpha-873-SNP
HsaSRE2 MmaSRE2 XlaSRE2 CaSRE3 HsaSRE3 MmaSRE3 XlaSRE3 C/EBP-CFTR
alpha-Pal-HA alpha-Pal-LA Sgs3-proximal-element RAR-beta-RARE RAR-beta-COUP-RE
rCRBPII-RXRE_(2) mCRBP-II-RXRE HBV-RXRE MHC-RXRE AFP-RXRE lactoferrin-RXRE
RXRgamma2-RXRE HS2NF5-site globin-HS2-8790-E-box HS2-8711-E-box Ets-laminin
IgH-pi-site Erg-2-CS AP-2-apoE-site-1 Zic-BS2 Zic-BS1 Zic-BS3 c-Myc-TIE
c-Myc-RSBE Smad-c-Myc-GC-element Smad-c-Myc-GTCT-element MZF-CD34-site-A
MZF-1-CD34-Site-B MZF-1-CD34-Site-C SMHC-AT-rich-element alphaA-crystallin-PE2A
APP-APBbeta APP-APBalpha CSS-B CSS-A BRE-G4 BRE-G3 BRE-G2 BRE-G1
Ets/NF-kappa-B-CK2 Staf_CS2 ATBF1-MRF4 MRF4-A/E1 C1-anthocyanin-proximal
C1-anthocyanin-distal C1_CS Egr-1-apoAI-E2 Egr-1-apoAI-E1 FTF-AFP FTF-FTF
FTF-DR0 FTF-FTZ-F1 FTF-SF-1 FTF-LFB2 FTF-HNF-3-beta Nkx-2.8-AFP TGF-beta1-AP1-A
TGF-beta1-AP-1-B iNOS-PPAR-gamma-RE alpha-2-I-proximal-FP1 Sp3-COL2A1 Sp1-COL2A1-1
Sp1-COL2A1-2 Sp1-COL2A1-3 Sp1-COL2A1-4 Sp1-COL2A1-5 Sp1-COL2A1-6 Sp1-COL2A1-7
PCNA-motif-IIa PCNA-motif-IIb BIF-2 BIF-3 BIF-1 rCOL1A1-CYE mCOL1A1-CYE
hCOL1A1-CYE col1A1-RE1 col1A1-IR col1A1-Y-box-1 col1A1-Y-box-2 col1a1-Y-box-3
myc-AR AR-ARE1 AR-ARE2 hET1-5-prime hET1-middle VeZf1-ET-1 RSV-EF-II-RS
chkYB-2-RSV pannier_CS BSAP-RAG-2 hdio2-CRE neu-28bp-activator c-Myb-RAG-2
IL-5-PRE-2 Oct-C/EBP-IL-5 IL-5-BR-7 SFF-CLB2 MCM1/SFF-SWI5 vitA2-19bpERE
vitB1-ERE vitB1-ERE2 xER_CS ER-apoVLDL-II ER-apoVLDLII-ERE1 ER-ovalbumin
ER-angiotensin bcl-2-ERE-E-3 bcl-2-ERE-E-4 BRCA1-ERE calbindin-ERE cathepsin-D-ERE-E2
complement-C3-ERE complement-C3-ERE-2 complement-C3-ERE1 COX7RP-ERE ER-beta-ERE
efp-ERE Ha-ras-ERE alpha-2-microglobulin-ERE lactoferrin-ERE hPR-ERE-B
hPR-ERE-A hPR-ERE-2 quinone-reductase-ERE pS2-ERE VEGF-ERE Alu-ERE calbindin-D9k-ERE
ckb-ERE lh-B-ERE c-jun-ERE JUN5-ERE oxytocin-ERE oxytocin-C-3'-ERE prolactin-ERE-1
prolactin-ERE2 prolactin-ERE3 prolactin-ERE4 prolactin-ERE5 vasopressin-ERE
VEGF-5'-ERE VEGF-3'-ERE c-fos-ERE c-fos-3'-ERE osg-ERE uteroglobin-ERE
esg2-ERE esg2-ERE-2 Pit-1_B1 Pit-1_B2 Pit-1_a Pit-1_b Pit-1_c Pit-1_d
Prl-1P_(2) Prl-3P Prl-1D Prl-4D Pit-1-rGH-1 Pit-1-rGH-2 Pit-1-hGH-1
Pit-1-hGH-2 Pit-1-TSHbeta-1 Pit-1-TSHbeta-2 hGHRHR-P1 hGHRHR-P2 hTRHA-A
hTRHR-B SS1R_fp2 SS1R_fp4 GH-N_LCR-1 GH-N_LCR-2 GH-N_LCR-3 Oct-1/2-IgH
Oct-1/2-AdITR Oct-1/2-U2_snRNA Oct-1/2-H2B Oct-1-SV40_site_I rGnRH_FP2
rGnRH_FP4 Oct-1/2-TIE2 Oct-1-CYP1A1 TTF-1_BS1 TTF-1_BS2 PBP-C3 mGnRH_nGRE
Oct-1/2-PU.1 Oct-1/2-HPV16 Oct-1/2-HPV18 Oct-1/2-HPV1A#1 Oct-1/2-HPV1A#2
Oct-1/2-LPL Oct-1/2-Il-4 Oct-1/2-Il-3 Oct-1-Il-2 Oct-1/2-Il-1 Oct-1/2-CD11c_integrin
Oct-1/2-junD Oct-1-IIB_Myosin_HC Oct-1-Opioid_receptor Oct-1/2-Ly-6E Nestin-FP-1
Nestin-FP4 B-FABP-POU-site Brn-1/2-PN-1 Brn-2_AADC Brn-2_CRH-II Brn-2_CRH-V
Tst-1_rGnRH-104 Tst-1_rGnRH-151 Tst-1_rGnRH-333 Tst-1_P0-I Tst-1_P0-II
Tst-1_P0-IIIa Tst-1_P0-IIIb Tst-1_P0-IV Tst-1_consensus Tst-1_JC-site_A
Tst-1_JC-site_B Brn-4_D1A_R-1 Brn-4_D1A_R-2 Brn-4_Glucagon_G1 Rex-1
FGF-4 UTF1 OPN_PORE HSV_Oct CRH-II POMC_DE2 HSV/CRH/DE2_consensus
Brn-5_CS1 Brn-5_CS2 alphaMHC-PRE-B1 Adh-1-NRE1 C/EBP-ADH1-1 C/EBP-ADH1-2
choline-acetyltransferase-ERE Sp1-vitA1 IMPDH-POS IL-2-proximal-octamer
IL-2-ZIP-site IL2-NFAT-280 IL2-NFAT-160 IL2-NFAT-135 IL2-NFAT-45 Brn-3-CRH
ROM2-PHS-beta-C ROM2-PHS-beta-D ROM2-DLEC2A ROM2-DLEC2B ROM2-DLEC2C Ets-Rh50-distal
UME6_CS Prd_CS Pax8_CS Pax2_CS Pax5_CS Pax6_CS Ren1-c-element-a
C/EBP-beta-TNF-alpha IRF-3_CS IRF-7_CS STE12-mdscan-motif-1 STE12-mdscan-motif-2
STE12-mdscan-motif-3 STE12-mdscan-motif-4 GAL4-mdscan-motif-1 GAL4-mdscan-motif-2
RAP1-mdscan-motif RAP1-mdscan-motif-2 RAP1-mdscan-motif-15 RAP1-mdscan-motif-3
RAP1-mdscan-motif-4 RAP1-mdscan-motif-5 RAP1-mdscan-motif-6 RAP1-mdscan-motif-7
RAP1-mdscan-motif-8 RAP1-mdscan-motif-9 RAP1-mdscan-motif-10 RAP1-mdscan-motif-11
RAP1-mdscan-motif-12 RAP1-mdscan-motif-13 RAP1-mdscan-motif-14 LEF1/TCF3-Xtwn
CRH-nGRE GM-CSF-GM550 E2F-c-Myc-site-II CYP2A3-NPTA C-P450-SDI O1-2C7
O2-2C7 O3-2C7 O1-2C11 O1-2C12 O2-2C12 O3-2C12 O1-2C13 ApoCIIIB-HPF-1
HIV-XMAS sericin-SC sericin-SB sericin-SA Mbp1-mdscan-motif-1 Mbp1-mdscan-motif-2
Mbp1-mdscan-motif-3 Swi4-mdscan-motif-1 Swi4-mdscan-motif-2 Swi4-mdscan-motif-3
Swi4-mdscan-motif-4 Swi6-mdscan-motif-1 Swi6-mdscan-motif-2 Swi6-mdscan-motif-3
Swi6-mdscan-motif-4 Swi6-mdscan-motif-5 Swi6-mdscan-motif-6 Fkh1-mdscan-motif-1
Fkh1-mdscan-motif-2 Fkh1-mdscan-motif-3 Fkh2-mdscan-motif-1 Fkh2-mdscan-motif-2
Fkh2-mdscan-motif-3 Fkh2-mdscan-motif-4 Fkh2-mdscan-motif-5 Fkh2-mdscan-motif-6
Fkh2-mdscan-motif-7 Fkh2-mdscan-motif-8 Ndd1-mdscan-motif-1 Ndd1-mdscan-motif-2
Ndd1-mdscan-motif-3 Ndd1-mdscan-motif-4 Mcm1-mdscan-motif-1 Mcm1-mdscan-motif-2
PEPCK-AF1 PEPCK-AF2_(2) JCVE-B-domain apoA-I-DRE WT-COX1-Sp1 5-LO-RZR-RE
NF-E2-alpha-spectrin CCSP-upstream-HNF-3-site CCSP-downstream-HNF-3-site
C4B-F1 C4B-F2 mTbetaRII-EBS RBCS-I-box C/EBP-beta-COX-2 LEF-1-MITF-M
PDBF-ThRE hGPIIb-G139 hGPIIb-G39 GM-CD28RR-CK-1 GM-CD28RR-Sp1-site ME-IRE-II
uPA-US-domain-C_(2) crystallin-DE2B crystallin-DE1A Adh-NRE1 DLEC2-PvALF-RE
PvALF-RY-repeat Sp1-HCA PEPCK-AF3 HBV-FTF-site-1 HBV-FTF-site-2 MRF4-MEF2/TATA
MRF4-E1 vit-A1-io-US RAREoct ALAS2-CACCC mim-1-MRE-A mim-1-NE LUN_RS
Pho8-UASp2 Pho5-UASp2 SATB1-3'-MAR-site-IV RFX-COL1A2 delta-crystallin-HN-DC5
tll-hb-1 tll-hb-2 tll-hb-3 tll-hb-4 tll-hb-5 tll-hb-6 tll-hb-7 tll-hb-8
Sp1-integrin-alphaV beta-globin-CPS IRF-2-synthetic_site Ikaros_CS Ikaros-TdT-D'-element
hGPIIb-G514 hGPIIb-G463 hGPIIb-repressor ERR_extended_halfsite ERR-gamma-RS
lactoferrin-RARE/ERE 6-16-ISRE_(2) IL-8-RSVRE IRF4-kappa-B1 IRF4-kappa-B2
CD14-TLS Pho2-Pho5-site-1 Pho2-Pho5-site-2 Pho2-Pho5-site-3 Pho2-Pho5-site-4
Pho2-Pho5-site-5 Pho5-UASp1 Pho5-UASp2_(2) Pho4-Pho5-site3 AP3-CarG1 AP3-CArG3
Adh1-C Adh2-D Mi-CRE MRS-part-2 GAMyb-alpha-amylase P-box Athb-1-HD_site
Athb-2-HD_site HAHR1_CS Hahb-4_CS ipnA-PACC-A ipnA-PACC-B P450-BM-1-barbie_box
P450-BM-3-barbie-box P450-BM-3-OIII AGP-PBRE COMP1-CS HFH-1_RS HFH-2_RS
beta-MHC-beta-e2 Skn-1_RS AGP-HB claudin-2-CdxA claudin-CdxB CdxA_CS
Cdx2-CaBP9K GATE C/EBP-beta_CS RP58_CS EBS-1 Egr-1-IL-2R-beta Egr-1-PDGF-A
Egr-1-alpha-MHC Hox/Pbx_heterodimer_site ADA-FP2D Pdx-1-insulin-P1 EphA2-repeat-E
N-myc-RFT-I hN-myc-RORE mN-myc-RORE Myf-4-MEF2 MCK-MEF2 COLX-MEF2-like-sequence
Rox-1-Rex-1 SRR2 Ad4BP_CS Sp1/Sp3-hCG-beta AP-2-hCG-beta Cnc/Maf-S_CS
CAC-BF-CS Brn-2_CS1 C/EBP-delta-APRE spB-4bp Ptx-3-TH ROR-alpha-1_CS ROR-alpha-2_CS
PCI-iAP2 PCI-uAP2 PCI-dAP2 TOR-DR-4 TOR-DR-4/G TAL-1_consensus TAL-1/E2A_RS
beta-RARE-NBRE SAP-2-E74-M3 forkhead_CS STAT6-12/15-lipoxygenase STAT6-angiotensin
STAT6-c-gamma-1 STAT6-c-gamma-3 STAT6-CD23 STAT6-eotaxin STAT6-CD23b STAT6-IgH
STAT6-lymphotoxin-alpha STAT6-P-selectin STAT6-sIL-1Ra Sp1-ILGF-II apoA-I-RORE
Staf_CS CQE1 SAP-1_CS MyoD-MLC-A Brn-2_CS2 Brn-2_CS3 Brn-2_CS4 Brn-5_CS
COUP-EMILIN LEF-Vbeta-8.1 ERSE GRP78-ERSE1 GRP78-ERSE2 GRP78-ERSE3
TRE-DR4 TGF-beta2-FKH-site-1 TGF-beta2-FKH-site-2 TGF-beta2-FKH-site-3
Brn-2-OA25 apo-AI-E2 gamma-globin-hemin-induced stromelysin-I-PEA3 CYP2C2-HPF-1
stromelysin-SIRE MT-IG-MREa MT-IG-TATA tPA-TRE tPA-CTF/NF-I-site tPA-GC-box-I
tPA-GC-box-II tPA-GC-box-III Meq_CS1 Meq_CS2 Meq_CS3 PU.1-MBN C/EBP-hMBN
Myb-MBN C/EBP-mMBN siamosis-WntRE fibronectin-WntRE alphaI-collagen-3'FP1
alphaI-collagen-3'FP2 alphaI-collagen-3'FP3 K17-RE K14-RE K16-RE
K5-RE K6-RE Xag1-region-2 Xag1-region-3 MERE-I MERE-II hStAR-SREBP-site
mTH-Pitx-site-I mTH-Pitx3-site-II mTH-PitX3-site-III mTH-Pitx3-site-IV
mTH-Pitx3-site-V mTH-Pitx3-site-VI CBS Cnc/Maf-S-idealized B29-EBF-site-1
B29-EBF-site-2 B29-EBF-site-3 SSU5B-B2b-I SSU5B-B2b-II STAT5-3beta-HD STAT5-alpha-S1_casein
ALS-GAS1 STAT5-Bcl-XL STAT5-Bcl-XL-2 STAT5-beta-casein STAT5-CIS1 STAT5-CIS2
STAT5-CIS3 STAT5-CIS4 STAT5-cyclin-D1 CYP2C12-GHRE1 CYP2C12-GHRE2 STAT5-CYP-GHRE
STAT5-H6-STAT STAT5-ins-GLE STAT5-IL2R-mGASI STAT5-IL2R-mGASII STAT5-IL2R-GASd
STAT5-IL2R-GASp STAT5-Ig-J-GAS STAT5-LT-GASL1 STAT5-OSM-prox-GAS STAT5-OSM-M-STAT
STAT5-perforin-pSTAT STAT5-prl-GLE STAT5-SPI-GLE1 STAT5-SPI-GLE2 STAT5-TCR-gamma-stat-1
STAT5-TCR-gamma-stat-2 STAT5-TCR-gamma-stat-3 c-myc-GAS-like-RE IFN-gamma-STAT-RE
IRF-1-SBE ACT-A ACT-B alpha2-macroglobulin-APRE STAT3-angiotensinogin
c-fos-SIE_(2) STAT3-c-myc STAT3-delta-APRE STAT3-delta-IV-site STAT3-CRP-APRE
STAT3-CYP19-GAS STAT3-gamma-fibrinogen-II STAT3-gamma-fibrinogen-III gp130-SBE_(2)
junB-JRE-IL6 junB-APRF-element LBP-STAT3-RE Lyb-A/E-delta-GAS STAT3-P21-SIE1
perforin-PSTAT SOCS-3-STAT-element SPI-3-APRF/STAT-element STAT3-SBE TIMP-1-STAT-RE
VIP-CyRE bcl-x-GAS CAEV-GAS CD40-mGAS CD86-GAS3 CD86-GAS4 CIITA-pGAS Fc-lambdaR1-GRR
GBP-1-GAS HLA-E-5'-IRR HLA-E-3'-IRR ICAM-1-pIlambdaRE ICAM-1-GAS-2787 INDO-PEII
INOS-GAS IRF-1-GAS IRF-1-GAS-2 MCP-1-GAS MIG-proximal-GAS MIG-distal-GAS
TAP-1-GAS PU.1-M-CSF G/HBF-1-H-box-III m-PCE-1 m-OTX b-PCE-1-up b-PCE-1-int
PSTI-Region-IV-core mEpo-3'-DR2 hEpo-3'-DR2 RARE-DR5 kB-I rkappa-kE1
r-kappa-kE2 BCF1-uE4 BCF1-uE5 RTBV-BoxII CR2-CS CR3_CS CR1_CS NHE-COUP-RE
AP-1-beta-APP-distal USF-beta-APP-proximal NF-1-5HT3R Eos-TCR-alpha Eos-NF-kB
Eos-CD3-delta PAUSE-1 PAUSE-1_CS1 PAUSE-1_CS2 PAUSE-1_CS3 NRF2/GABP-ATP-syn-beta
Sp1-ATP-syn-beta osteocalcin-VDRE-2 24-hydroxylase-VDRE hTERT-downstream-E-box
hRIPE3b mRIPE3b rRIPE3b ROR/RZR_consensus Rev-erb-alpha-CS HAND2/E12_CS
GCS1-EpRE m4-mAChR-NRSE DEC1-HRE2 DEC2-HRE DEC2-HRE2 AP-2-delta-optimized-site
MyoD_CS Myogenin_CS2 E47_CS E47-MyoD_CS E12-MyoD_CS E-myogenin_CS E-box-#5
E-box-aa E-box-#6 mDRE1 GRF-FTZF1-RE UT-A-TonE TonEBP-CS hsp70-2-TonEA
hsp70-2-TonEB hsp70-2-TonEC hsp70-2-TonED CYP4A6-proximal-PPRE MHR3-EcRE1
MHR3-EcRE2 MHR3-EcRE3 MHR3-EcRE4 MHR3-MRE PSA_ARE Slp-ARE-1 Slp-ARE-3
hAR-ARE1 PU.1-c-fes PU.1-Fclambda-RI Stat5a-CS Stat5b-CS alpha-MHC-T3RE
S14-FUR-T3RE-1 S14-FUR-T3RE-2 S14-FUR-T3RE-3 T4-wild-type-DR4 Renin-RP-2
mEpo-HRE DEC1-HRE alpha2(I)-collagen-FP2 alpha2(I)-collagen-FP1 MTIIA-MREa
IGFBP-1-IRS-core Tto1-LTR4 Pv-PAL2P H-box PAL2-AC-I rODC-box-1 rODC-box-2
Fli-1-CS Fli-1-PuB2-m-2 CYP7A1-CDP-site-1 CYP7A1-CDP-site-2 CYP7A1-CDP-Site-3
CYP7A1-CDP-site-4 Cbfa-site-1 Cbfa-site-2 Cbfa-site-3 Cbfa-site-4 DexRE-1
DexRE-2 CYP3A23-Site-A SNOG_element_CS U3B-consensus GST-GPEI-core ARE_CS
ESE-3_CS alpha2-MCM1_CS NF-1-alpha2(I) alpha2(I)-undefined-site Ii-kappa-B-2
JCV-Pnt2 delta-EF1-SDRE delta-EF1-NRE AP-1-JCV ks1-dfd-1 FVa-SFFVp FVb2-SFFVp
FVc-SFFVp Sp1-SFFVp PEBP/CBF-SFFVp TXS-NFE2/AP-1-site ESE-1-NOS2 ESE-2-PSP
HIV-2_pets ACC-alpha-SRE-1 ACC-alpha-T3RE Egr-1-TNF-alpha TNF-alpha-CRE
TNF-alpha-kB1 TNF-alpha-kB2 TNF-alpha-kB3 Sp1/Egr-1-TNF-alpha PIS1-MCE1
PIS1-MCE2 Adf-1-Adh-P-2 Pax-Pax5-E1 POU-Pax5-E1 HOX/PBX-site Hox/PBX-site-2
U-prosaposin TH-dyad TH-Oct/Heptamer rITF2-Pan eve-2-MSE-GTTT4 Fkh-site
HNF-3-HNF-3-beta FKS2-CDRE NF-kB-Nos2 WT1-Cyclin-E-site-1 WT1-Cyclin-E-site-2
WT1-Cyclin-E-site-3 YY1-GATA-3 GATA-3-E-box Herp-ERSE-II Herp-ERSE Blk-BSAP-site
CD19-BSAP-site J-chain-BSAP-site GSTP1-R1 GSTP1-C1 NF-1-JCV-site-D NF-1-JCV-site-E
NF-1-GFAP NF-1-PLP NF-1-S100-beta-1 NF-1-S100-beta-2 NF-1-mNF-L NF-1-hPROENK
MEBA-MBP rLHalpha-GnRH-RE rLHbeta-GnRH-RE hLH-alpha-GnRH-RE mLHalpha-GnRH-RE
ATF/CREB-E-alpha TCF/LEF-E-alpha CBF/Ets-E-alpha AP-1-beta4-integrin Ets-beta4-integrin
Sox10-myelin-P0 HNF-4-factor-XI LMP-1-ets-site SOX9-S9WT SOX9-CDL2C2 SOX9-CD3-epsilon
Sox17-RS SRY-CS CNP-A GAGA3-V1bR GAGA5-V1bR ANT2-silencer-element
ANT2-silencer-core ANT2-Go2 ANT2-Go1 IL-12-GA-12 NF-kB-IL-12 C/EBP-IL-12
IL-4-MARE IL4-P0/P1 IL-4-octamer Tax/CREB_CS Tax/CREB-JC RBPJkappa-palI
RBPJkappa-PalII RBPJkappa-M3 RBPJkappa-Cp RBPJkappa-Hes RBPJkappa-LMP RBPJkappa-pIX
hTERT-ERE HTLV-NFOC-DR glide/gcm_CS GBS-E GBS-D GBS-C GBS-B
GBS-A IA-1_CS c-Abl_CS Reverb-alpha-Rd Rev-DR2 IA-1-Pax6 IA-1-NeuroD/beta2
IA-1-IA-1 Pax-8-WT1 Pax-8-thyroperoxidase TXS-nfe2-3 TXS-nfe2-2 B29-TOAD
B29-FROG HFH-2_CS1 HFH-2_CS2 HFH-2_CS3 HNF-3_CS2 SSA1-HSE2 MITF-MMCP-6
C/EBP-HBV-UE C/EBP-HBV-EnI C/EBP-HBV-EnII-1 C/EBP-HBV-EnII-2 C/EBP_CS3
KTF-1_RS Stat-5-cyclin-D2 beta5-integrin-FP1 beta5-integrin-FP2 beta5-integrin-FP3
beta5-integrin-FP4 ApoD-SRE1 ApoD-SRE2 ApoD-APP UREF-PCNA CFDD-PCNA NTF-1_CS
escargot_CS PCNA-DRE N-CAM-HBS-I RVR_RS mTf-SE2-E-box vgf-E-box vgf-CRE
vgf-CCAAT GATA-double-GATA osteopontin-6PORE FoxA1-Fox-site Tbx1-Fox-site
NIP-consensus IL-3-NIP C/EBP-delta_CS mTRP-1_M_box Mi-MB2 M-box_MB3 M-box-T>A
M-box-A>T hTyros-TDE hTyros-TDE-m1 hTyros-TDE-m2 hTyros-InrE mTyros_InrE
Ets-2-BRCA1 tau-FOOT Sp1-tau AP-2-tau NERD1-A9WT NERD1-C35 NERD1-C9 C50
AP-1-WDSV WDSV-5bp-repeats Sox10-P0-Site-A Sox10-P0-Site-B Sox10-P0-Site-C
Sox10-P0-Site-D Sox10-P0-Site-E Sox10-P0-Site-F NFLC-CRE Foxa-Foxa2 Foxa-Foxa2-2
PREF-1 Lp1 Ucp-2 WT-1-FREAC-4 TPO-B1 COXIV-Ets-site VDR-Z1
VDR-Z2 Gfi-1_CS Gfi-1-R21 HCMV-Gfi-1-site-1 HCMV-Gfi-1-site-2 rQR-ARE
hQR-ARE rGST-P_ARE Scratch-RS MyoD-mSlug MyoD-hSlug MyoD-hCalpain-6 osmY-CRP_site
osmY-IHF_site Lrp-osmY-site-1 Lrp-osmY-site-2 CRP_consensus IHF_consensus
Lrp_consensus Oct-C1_CS Fli-1-Ets-site-1 Fli-1-Ets-site-2 Col2alpha1-E-box-4
hGH-F14.3.1 hGH-F14.3.4 hGH-F14.1.3 chromogranin-B-core-element HIV-T3RE_(2)
apoA-I-DRE_(2) hPRL-Pitx-B1 hPRL-Pitx-B2 POMC-CE3 glucagon-G1-51 Pax-6-glucagon
glucagon-Maf-site c-myc-NHE-G Nrf2-GST-P1-site-1 Nrf2-GST-P1-site-2 Nrf2-GST-P1-site-3
AR-GST-P1-site-1 AR-GST-P1-site-2 AR-GST-P1-site-3 AR-GST-P1-site-4 AR-GST-P1-site-5
AR-GST-P1-site-6 AR-GST-P1-site-7 WIN-SAAB5-12 WIN-SAAB5-1C WIN-SAAB5-13C
9kVDRE LRE(AA) mOG2-cis-element Runx_consensus LEF1_CS Max/Max_CS c-Myc/Max_CS
USF/USF_CS ARNT/ARNT_CS ALAS2-GATA-A ALAS2-GATA-B ALAS2-CAC-A ALAS2-CAC-B
MCK-L MCK-R muscle-specific-E-box-CS AgammaCCAAT/DR mouse-beta-H1
epsilon-2DR epsilon-CCAAT/DR epsilon-5'DR mouse-epsilon-Y psi-DR-1 Agamma-117-HPFH
Agamma-107/8 ZmABI4_RS mABI4-1 mABI4-4 ABI4-Rab28 ABI4-HVA1 ABI4-HVA22
ABI4-Rab17 ABI4-Rab16B ABI4-CdeT27 ABI4-AtABI4 ABI4-OsABI4 rQR-ARE_(2)
Adh2-F HPV-16-E2-site-4 HPV-16-E2-site-3 HPV-16-E2-site-2 HPV-16-E2-site-1
PBREM-NR1 PBREM-NR2 globin-HS2-NFE2-motif Foxp1_CS HIV-1-E-box/ets_element
8DR-T3RE TRvalpha2-68DR TR-valpha2-8IP FREAC_core_motif FoxA2-Fox-site
osteopontin-RE-1a-1 osteopontin-RE-1b-4 Elk_CS1 Erg_CS1 Spi1_CS1 Spi1_CS2
hAR-IVSARE AP-1-like-GnRHH Tg-K Tg-A Tg-C GST-pi-RARE-1 GST-pi-RARE-2
GST-pi-RARE-3 EWG_RS FoxA2-cdx-2 SM-alpha-actin-cis-element lama3-Ebox3
G6Pase_IRS_1 G6Pase_IRS_3 OxyR-ORE Sp1-hTAFII55 AP-2-hTAFII55 hTAFII55-initiator
TAFII55-DPE DPE_CS Genesis_CS Genesis-site-3 Genesis-site-4 Genesis-site-5
Genesis-site-7 Genesis-site-12 Genesis-E2 Genesis-TTR Genesis-site-25 core-promoter-motif-1
core-promoter-DRE-motif core-promoter-TATA-motif core-promoter-INR-motif
core-promoter-motif-5 core-promoter-motif-6 core-promoter-motif-8 core-promoter-DPE-motif
core-promoter-motif-10 CD4-P2-site CD4-P3-site CD4-P1-site IGFBP-5-M1 IGFBP-5-M2
Xbra2-CACCT-site Nil-2a-IL-2 Bra_RS AREB6-IL-2 MCK-E2_box Osteopontin-Hox-site
neuronal_silencer_CS hDBH-element-I hDBH-silencer-element-2 DBH-HS-I DBH-TATA
N-CAM/PBS hKDR/flk-1-Inr mKDR/flk-1-Inr Ddc-Z1-site-1 Ddc-Z1-site-2 Ddc-Z1-site-3
Ddc-Z1-site-4 Ddc-Z2-site-1 Ddc-Z2-site-2 Ddc-Z2-site-3 Ddc-Z2-site-4 Ddc-Z2-site-5
Ddc-Z3-site-1 Ddc-Z3-site-2 Ddc-Z3-site-3 Ddc-Z4-site-1 Ddc-Z4-site-2 Ddc-Z4-site-3
Ddc-Z4-site-4 Ddc-Z4-site-5 gsc-DE-D29 gsc-DE-D17 TRAC-CRP-site TRAC_CS
Six4-ARECS Six4_CS Trex/MEF3_composite_CS Six5_CS Six5-IGFBP5 IRS-CS_(x)
IL4-P0-element Pit-1-GH-site-A Pit-1-GH-site-B Pit-1-GH-site-C C4B-F3
duodenal-enhancer-CS ADA-FP-1 ADA-FP-2 ADA-FP-3-a ADA-FP-3-b ADA-FP-4 ADA-FP-5
ESRRA23 PXR-UGT1A1 NR1-UGT1A1 UGT1A1-XRE Slug/Snail-aromatase aromatase-CREaro
Rev-ErbAalpha_CS glucagon-G1-56 C/EBP-gamma-IL-6 C/EBP-optimal H3.2-YY1
AP-2-H3.2 H3.2-X-site RTBV-Box-II beta-globin-CACCC-box-CS Oct-C4_RS mGATA-1-HS1-GATA-E-box
hGATA-1-GATA-E-box s-GC-box p35-GC-box Sp1-idealized Nkx-2.5_CS Nkx-2.2_CS
osteopontin-RAE Fnr_CS NarL/NarP_CS2 aldolase-C-28bp-element aldolase-C-box-C-site
aldolase-C-site-824 aldolase-C-site-524 kappaE-3prime-enhancer-WT kappaE3-Oligo-7
Dbp-Ebox-1 Dbp-Ebox-2 Dbp-Ebox-3 Dbp-Ebox-4 PAR/bZIP_CS HIF-1_CS Fkh-kruppel
Fkh-TTR Fkh-CRYSTAL Fkh-TTR-weak Fkh-EH-WT laminin-B2-PEA3/EBS-element
collagenase-IV-PEA3/EBS-elemen hCD4-PEA3/EBS-element mCD4-PEA3/EBS-element
COXVb-Inr-PEA3/EBS-element COXIV-Inr-PEA3/EBS-element Ad2-ML-Inr Finb/RREB-1-Secretin
Finb/RREB-1-Calcitonin Finb/RREB-1-c-erbB2 RREB-1-CS BETA2/NeuroD-Secretin
Secretin-GCI Secretin-GCII E2F1-cyclin-D3 CD18-HRE TOR-DR-5 TOR-DR-6 TOR-DR-4/T
RARE-1A RARE-1C RARE-1G RARE-1T RARE-5G RARE-5T RARE-6C RARE-6G
RARE-6T RARE-7A RARE-7G RARE-7T RARE-3G RARE-5A mHoxb5-Dr5-RARE hHoxb5-Dr5-RARE
zHoxb5-Dr5-RARE SXR-DR-4 SXR-IR-4 CYP3A4-inducible-element DR5-RARE hRARalpha2-RARE
mRARbeta2-RARE hRARbeta2-RARE hRARgamma2-RARE hADH3-RARE mLB1-RARE mCRABPII-RARE1
mCRABPII-RARE2 HIF-1-iNOS Pax-5-H2A-2.2 Pax-5-H2B-2.2 Pax-5-H2B-2.1 Pax-5-CD19-1
Pax-5-Iepsilon Pax-5-alphaS-1 Pax-5-Sgamma1 Pax-5-CD19-2-A-ins Pax-5-CD19-2
Pax-5-H2A-2.1 Pax-5-5'Sgamma2a Pax-5-PRS-5 Pax-5-e5 Pax-5-H2A/e5 Pax-5-H2A-17C
Spi-1-SV40 Spi-1-EIAV Spi-1-Igkappa Spi-1-Iglambda-2-4 Spi-1-Ig-Vkappa19
Spi-1-M-CSF-receptor Spi-1-FclambdaRI Spi-1-FclambdaRIIIA Spi-1-IL-4 Spi-1-Ig-J-chain
Spi-1-scavenger-receptor Spi-1-CD11b Spi-1/Spi-B-c-fes COL1A1-FP1 MCREF-1-MSV-1
Rox/Max_CS JE-element TM-DR4-RARE alpha2(I)-FPI alpha2(I)-FPII alpha2(I)-FPIII
TRE-DR5 HIF-1-Noxa Myb-CD13/APN Tcf_CS Tcf-4-osteopontin Ctpct-region-A
Ctpct-region-B Ctpct-region-C HOX-PBX_CS PU-ets-TFEC-5 REBOX Mt1
Mt3 Mt4 hPGCG-G1 hPGCG-G2 hPGCG-G3 rPGCG-G4 hPGCG-G4 EF-1alpha-EFP1
EF-1alpha-EFP2 HoxTF-Hoxb-4 HIF-1-hLeptin m-apoAI-RORE CD13/APN-Etc-C GST-Yalpha-AHRE
GST-Yalpha-ARE/EpRE M-CSF-receptor-site-A dSIM/ARNT_CS mVEGF-HRE hSIE-m67
MGFe HoxTF_CS Ets-2-boIFNT1 ovIFNT-p7 C/EBP-FLAP-proximal C/EBP-FLAP-distal
Arp14D-element-I-site DBH-OLI-D albumin-DEIV junB-IL6RE PAX2-WT1-Site-I
PAX2-WT1-Site-II PAX2-WT1-Site-III B29-BCS Sp1-B29 Ets-B29-1 Ets-B29-2
Ikaros-B29 HDBP_CS M-CSF-receptor-site-B M-CSF-receptor-site-C PU.1-M-CSF-receptor
M-CSF-FIRE-site-1 M-CSF-receptor-site-Z LBF4-LMP1 WT1-EGFR-1 TTF-1-SP-B
Sp1-SP-B-1 Sp1-SP-B-2 HNF-3-SP-B GAGATA-PSA3.1 MRF4-AT_site Ldha-HRE ENO1-HRE
EPO-1-HRE hVEGF-HRE ALDA-HRE PGK1-HRE CDP-dNRE-1 CDP-dNRE-2 CDP-dNRE-3
CDP-dNRE-4 CDP-dNRE-5 HIF-1-TfHBS mFlt-1-HIE hFlt-1-HIE cycD2-E3-E-box
cycD2-E4-E-box Azf1_RS Cbf1_CS Cin5_RS Fkh1_CS Fkh2_RS Gln3-GLN1-162-UASNTR
CuRE_CS Pdr1_RS Pdr3_RS Rap1-telomeric-site Aft1_CS Reb1_RS Rim101_RS
Rph1_RS1 PACE_element Rtg1/Rtg3_CS Skn7_CS Stb5_CS Sum1_CS DAN1-DRE1
Uga3_CS Ume6_CS Yox1_CS ZRE_CS Gfi-1_CS2 Gfi-1-ELA2-8 Gfi-1-ELA2-9
Gfi-1-AZU-1 Gfi-1-AZU-2 Gfi-1-AZU-4 Gfi-1-AAT Gfi-1-AAT-2 Gfi-1-ACT Gfi-1-ACT-2
Gfi-1-ACT-3 Gfi-1-Jak3 Gfi-1-C/EBP-alpha Gfi-1-C/EBP-alpha-2 Gfi-1-C/EBP-epsilon
Gfi-1-E2F5 Gfi-1-IL2-1 Gfi-1-IL2-4 Gfi-1-IL6R-2 Gfi-1-IL6R-3 Gfi-1-IL8-2
Gfi-1-IL8-3 Gfi-1-Gfi-1b Gfi-1-E2F6 Gfi-1-Ets2-1 Gfi-1-Ets2-3 Gfi-1-c-Myc
Gfi-1-c-Myc-2 Gfi-1-c-Myc-3 Gfi-1-c-Myc-5 Gfi-1-c-Myc-6 Gfi-1-P21 Gfi-1-P21-2
Gfi-1-Gfi-1 Sp1_CS-X Sp1-CS-Y Sp1-c-kit Azf1-CLN3 c-CaD-SRE HIF-1-guanylin
Xbp1-CLN1-1 Xbp1-CLN1-2 Xbp1-CLN3 Xbp1-CYS3 insulin-Za-element AR1
AR2 AR1-CS2 AR1-CS3 AR2-CS2 Mot3-his4-912-A Mot3-his4-912-B Mot3-his4-912-C
Mot3-his4-912-D Rox1-PIS1 Nrg1-UAS1-1-A Nrg1-UAS1-1-B Hac1-UPRE Stp2-BAP3
Abf1_CS Dal82-Dal4-RD7 Dal82-Dal4-RD8 Dal82-DAL7-1 Dal82-DAL7-2 HAP1_CS1
HAP1_CS2 HAP1_CS3 Yox1-MCM3 Ndt80_CS BlaI_CS CytR-half-site-L RafR_CS
cpxR-P_CS mngR-RS1 gcvA-gcvTHP glpR_consensus icrR_CS modE-moa nagC_half-site_CS
pdhR-pdhR TerB tyrR_CS tpl-box-C WT1-Bcl-2-1 WT1-Bcl-2-2 Bas1-ADE5/7-1
Bas1-ADE5/7-2 Bas2-ADE5/7-1 Bas2-ADE5/7-2 nreb-F170/L nreb-F130/U CLN3-DDE1
Aft2-FET3 SIP4-CSRE FacB-class-B-CS1 FacB-class-B-CS2 Gln3-Dal3-1-UASNTR
fruA-DS CCR-palindrome-CS ToxT_RS ILV1REB1A/B SIN3REB1 Reb1-Reb1-A-site
Reb1-Reb1-B-site Reb1-Reb1-C-site atZAP1_CS erpAB-site-1 erpAB-site-2 sigma-54-CS2
sigma-28-CS2 Ylr266_CS DRE_CS CytR-half-site-R Ag-MADS-domain-CS Flc-SOC1
CYP24-VDRE-1 CYP24-VDRE-2 CYP24-EBS mngR-RS2 rhaS-rhaBAD-1 rhaS-rhaBAD-2
rhaS-rhaT-1 rhaS-rhaT-2 rhaR-rhaSR-1 rhaR-rhaSR-2 HpaR-OPR1 HpaR-OPR2 HucR_RS
melAB-site-2 melAB-site-2' Fnr-pmelR IAP-LTR81C-site MBox TyrpI-Ebox
TYRO-Ebox Yap1-RS Yap2_CA SPRR1B-EBS/GC Ets-2-CD13/APN ceh24-NdE-box
HIF-1-LDH HIF-1-PGK mper1-proximal-Ebox mper1-middle-Ebox mper1-distal-Ebox
Hoxa-1-RAIDR5-CE2 Rev-DR2-CS Brinker_CS megakaryocyte-enhancer-CS Sp1-EDA-1
Sp1-EDA-2 EDA-enhancer PDRE_CS PDR5-PDRE-site-1 Pdr5-PDRE-site-2 Pdr5-PDRE-site-3
TraA-RS CR_CS Emu-site-C2 Emu-site-C5 Emu-site-C6 IFNA-DNRE AlgR1_CS
ArgR_CS OmpR-OmpF-F1 SinR_CS xyl-IA2 deoR-RS ada-UP-element ARG_box_CS
cynR-RS CysB-hslJ-1 fadR_CS fhlA_CS Fis_CS pts-FruR-box Fur_CS hipB_CS
ilvYC-O1 lrp-gltBDF metR_CS narL_CS OxyR-dsbG soxS_CS torR_CS CorR-cfl
perA_CS OmpR-OmpF-F2 OmpR-OmpF-F3 DnrI_CS Hpr_CS Ets-FREAC-4-1 Ets-FREAC-4-2
Ets-FREAC-4-3 PrfA_box fadR-fabB Orf10-RS cynR_CS cbaA-siteI cbaA-site-II
alphaA-CE2-T-MARE PRL3 CARP-108 PSA-ARE-VI PSA-ARE-V PSA-ARE-IV PSA-ARE-III
PSA-ARE-IIIA PSA-ARE-IIIB Pax6-c-maf-A Pax6-c-maf-E Pax6-c-maf-F c-Maf-MARE-1
c-Maf-MARE-2 tir-Ler-activation_site tir-ammonium-dependent-site tir-negative-element
C13-RARE A24-RARE NodD_CS NodD_CS2 AP-2-H-PGDS CysB-hslJ-2 torR-tor-operon-box-3
ilvC-O2 P-LAP-FP4 P-LAP-FP3 P-LAP-FP2 P-LAP-FP1 Mlc-malT PerA-perA PerA-bfpA
PerA_CS aidB-UP-element xyl-IA1 xyl-IF1 xyl-IF2 CFTR-102A COL4A6-US
RBP-IL-6 Lmo2-E-box-2 ModE_CS LexA_CS3 PurBox BCL6_CS X-MyT1_CS p53-E2FBP1/DRIL1
Ncx_CS NMP-2_CS OCFRE Myb305-CHI PF4-TME Dof3_CS GLUT2-site-F GLUT2-site-G
GLUT2-site-H Cas-BR-E-CG5 GLUT2-site-C-1 Th1/E47_CS Ash1p-site-1 Ash1p-site-2
Ash1p-site-3 Ash1p-site-4 Ash1p-site-5 Ash1p-site-6 rTSHbeta-nT3RE DBH-domain-I
DBH-domain-II DBH-domain-III VEGF-HRE-1 VEGF-HRE-2 Barx2-Bx55(HBS1) Barx2-Bx75(HBS1)
Barx2-Bx55(HBS2) Barx2-Bx75(HBS2) Barx2-Bx98(HBS1) Barx2-Bx23(Alu) Barx2-Bx68(HBS1)
Barx2-Bx81(HBS1) Barx2-Bx103(HBS1) p53-M-PGAM p53-MCK p53-RGC-2 Mef2-E1
PEPCK-RARE2 L1-HPD Ng-CAM_HBS RANKL-HSE ssT1-Timp-1 ssT1_CS ssT1-Timp-1-ds
HIF-1-hexokinase Math3-E-box Math3-N-box YY1-rpl32 YY1-rpl30 YY1-serum-amyloid-A1
YY1-delta-globin YY1-Ig-kappa3'-enhancer YY1-RSV-TSSC L-PGDS-E-box L-PGDS-N-box
Ncx-US Ncx-RARE NNbetaRARE NN7-29 NN7-51-1 NN7-51-2 NN7-71 NN7-87-1
NN7-91 NN8-3 NN8-4 NN8-29 NN8-39 NN8-44 NN8-49 NN8-66
Hmx-3_CS Ren-CNRE DR4/LXRE E2F-Cdc6 EKLF-GEG c-Kit-Mi-element Zfh-1_RS
hNET-NI Qrx-Ret-1 Qrx-BAT-1 KLF5-Dbeta-1 CystatinE-CNRE RP21-425-CNRE
RP23-157O10-CNRE HYPk-CNRE-1 HYPk-CNRE-2 S100A9-CNRE Psx-1-CNRE Fbln-2-CNRE
Scmh-1-CNRE NET-7-CNRE ACEII-cbh1 CreA-prn vnd/NK-2_CS vnd/NK-2-optimal-site
LexA_CS4 LexA_CS5 LexA_CS6 LexA_CS7 LexA_CS8 LexA-lexA LexA-recA LexA-uvrA
LexA-ssb LexA-ruvAB Ren-2-proximal-site AML1-Vbeta-8.1 TTF-1-AoGen-643
TTF-1-AoGen-446 TTF-1-AoGen-125 TTF-1-AoGen-14 TASS-1 Ren-1c-CRE Barx-2_CS
SRY/Sox_CS MecI-Mec Tox-Box_CS HAC1-UPRE tinman-E1,2 tinman-E3 AP-2-alpha-BTE
AP2-alpha-A32 E2F-B-myb B-Myb-DRS CCNA-CDE/CHR CDC2-CDE/CHR CDC25C-CDE/CHR
NF1-MBP MITF-MMCP-6-1 MITF-MMCP-6-2 POMC-SIE POMC-NurRE GATA-1-GP6 Shh-SBRN3
Brn3b_CS HNF-1-ngn3 ngn3-H3-2 HES1-ngn3-N1 HES1-ngn3-N2 HES1-ngn3-N3 HES1-ngn3-N4
EcF-cyclin-E OxyR-ahpC-P1 OxyR-fhuF-2 OxyR-fhuF-1 OxyR-yfdI TTF-1-site-C
MSE-S aromatase-3CRE aromatase-XCRE SF1-aromatase Sp1-KDR/flk-1-I Sp1-KDR/flk-1-II
Sp1-KDR/flk-1-III Sp1-KDR/flk-1-IV Ngn3-Pax4 HNF1-Pax4 hCS-1-site-II hGH-T3RE
rGH-T3RE-1 rGH-T3RE-2 rGH-T3RE-3 rGH-site-I TOXE-TOXA/HTS1 RISBZ1-GluB-1
O2-CS conRTRE M3-RTRE DR1-RTRE P0-RTRE 1/2-RTRE P2-RTRE hCorin-GATA
mCorin-GATA syndecan-FIRE-motif-5 syndecan-FIRE-motif-4 syndecan-FIRE-motif-3
syndecan-FIRE-motif-2 syndecan-FIRE-motif-1 mHoxD12-RXI cHoxD12-RXI zHoxD12-RXI
xlnB-C4/C3 xlnB-C2/C1 Nmp4-COL1A1-site-A Nmp4-COL1A1-site-B pdx1-Ph1-site-1
pdx1-PH1-site-II pdx-1-PH2-site-I PB-ARE2 Bapx1-B7 BS5-B-core ED7-D-core
HPR1-Sp1-A HPR1-Sp1-B HPR1-Sp1-C HPR1-ERE-C/D HPR1-ERE-B HPR1-ERE-A c-fes-FP1
c-fes-FP2 c-fes-FP3 c-fes-FP4 c-fes-FP4-3' pSP-A2-TBE1 bSP-A1-TBE2 bSP-A2-TBE2
alpha1a-AR-HRE Nkx-6.1-Nkx6.1 FadR_CS FadR-fadB LAMC1-bcn-1 V2R-CSE1 lacI_CS
NarL/NarP-napF CLN3-DDE2 CLN3-DDE3 CLN3-DDE4 RORE PHEX-GRE Hd-ZIP-I/II_CS
HD-Zip-III_CS claudin-18a-probe-I claudin-18a1-probe-II CYP3A2-DR3-PXRE
CYP3A2-DR3-PXRE-2 CYP3A4-DR3-PXRE CYP2A2.3-ER6-PXRE CYP3A5-E6-PXRE CYP3A6-ER6-PXRE
CYP3A7-ER6-PXRE MDR1-ER6-PXRE CYP2B1-DR4-PXRE CYP2B6-DR4-PXRE CYP2B6-DR4-PXRE-2
CYP2C9-DR4-PXRE MDR1-DR4-PXRE MRP2-ER8-PXRE CD4-S1 CD4-S3 CD4-S2
aldolaseA-MEF3-site myogenin-MEF3-site Right-MCK-E-box Ins-1-E-box Da-E-box
Scleraxis-E-box EPOHBS TfHBS Rap1p-strict-CS BEN-EFG-B8 Pax5-mhb-E2
Pax5-mhb-E1 AML1-IMPDH M-CAT-A CBF1-rRen CBF1-mRen CBF1-hRen Ets-1-rRenin
hEPCR-Region-I hEPCR-Region-II hEPCR-Region-III hEPCR-Region-IIIa hEPCR-Region-IV
hEPCR-Region-V Pbx1:Hox_RS Pbx1:Meis1_RS HNF-1-UGT2B17 UGT2B-PSE slowpoke-C0-block-1
slowpoke-C0-block-1-hyd slowpoke-C0-block-4 slowpoke-C0-block-4-hyd slowpoke-C0-block-8
slowpoke-C0-block-8-hyd slowpoke-C0-block-9 slowpoke-C0-block-9-hyd slowpoke-C0-block-10
slowpoke-C0-block-10-hyd slowpoke-C0-block-27 slowpoke-C0-block-27-hyd
ASK-E2F-site LE-ACS-G-box osteopontin-OPSrcRE FAC1-APP-1 FAC1-APP-2 FAC1-PS-1
FAC1-PS1-2 FAC1-D2-R-1 FAC1-D2-R-2 FAC1-SOD1-1 FAC1-SOD1-2 CHOP10/CEBP-beta_CS
p20K-QRU p20K-region-A Sp1-cyclin-D2 p68-89 p68-E p68-E2FB ANT_CS
hprA-cytokinin-inducible-site hprA-TGACG-motif DSCKX1-cytokinin-inducible-1
DSCKX1-cytokinin-inducible-2 Hoxb1-PBX-HOX-site Hoxb1-PBX-MEIS-site Lab/Exd_CS
Arp14D-element-I zGATA-GATA-double-motif zGATA-1-DE168-29bp-element COL9A1-SOX/Sry-D-site
COL9A1-SOX/Sry-E-site Sp1-VEGF tal-RE tal-RE_CS CPS-I-site-III CPS-I-site-II
CPS-I-site-I CPS-I-GAG-element P450scc-SCC2 P450scc-SCC1 AP-2-p450scc RANTES-site-A
c-Fms-site-A Aml-1-c-Fms Ets/Sp1/AML1-c-Fms RTEF-1-VEGF beta-enolase-BEE
NR(I)-ast-I NR(I)-ast-II NR(I)-ast-III CD155-FPIII CytR_CS MalI_CS RafR_CS2
RbtR_CS ScrR_CS fruAB-CRE-W fruAB-CRE-S Tet-O1 marO-site-I phoB-phoB
FoxL2-StAR FoxL2-StAR-2 FoxL2-StAR-3 HIV-NRRE-1 hMCAD-NRRE-1 mMCAD-NRRE-1
CRP-IL-6-responsive-site Glc-6-Pase-IRU ERELEE4-box ROS-responsive_element
flk1-HBE Cav3m2 Cav3m6 Sox2-POU-site-2 Sox2-POU-site-1 DRE-palindromic-sequence
HIF-1-hAldolase-A HIF-1-hVEGF HIF-1-hIGFBP-1 HIF-1-rIGFBP-1 HIF-1-mIGFBP-1
HIF-1-Heme-oxygenase HIF-1-rAFP-1 Mig1-SUC2-A Mig1-SUC2-B Mig1-GAL1-A Mig1-GAL1-C
APBP-1_CS APBP-1-Aggrecan-region-L Bcl-6-NF-kB1-1 Bcl-6-NF-kB1-2 Bcl-6-NF-kB1-3
CTS1-UAS-left CTS1-UAS-right flk-1-palindromic-GATA iclR-iclR iclR-aceBAK
SRF_CS MCM1_CS MEF2A_CS MafA-insulin-II-C1 NarL/NarP-hyb-site-1 NarL/NarP-hyb-site-2
NarL/NarP-hyb-site-3 ArcA-hyb ArcA-hya NarL/NarP-hya-site-1 NarL/NarP-site-2
myc-TBE2 uhpA-uhpT-S uhpa-uhpT-W MDR1-ER6/DR4(III) MDR1-DR4(II) MDR1-DR4(I)
GCC-box EGFREgrRE RFX_CS RFX4-IL5Ralpha alpha9-nAchR-Sox-site ZAS3-RS
Myc-GH1 eve-PTE MOK2-IRBP MOK2_CS KLF15-rhodopsin rhodopsin-bNRE FleQ-flhA
FleQ-fliE FleQ-fliL FleQ-fleSR rKL-1 hKL-1 Slp1-RS RORalpha_CS Pax-1_RS2
B6BS AREA hPPARalpha-FXRE GABAbR1b-MUC eve-173-site-2 eve-173-site-3
eve-173-site-4 Brachyury-eFGF-distal Brachyury-eFGF-proximal Brachyury-mFGF-4
Brachyury-hFGF-4 Brachyury-palindromic-RS marO-site-II CYP3A4-DR3-XREM
Gln3-GDH2-SITE3 ArgR-car-operator ArgR-argF ArgR-aruC-B1 ArgR-aruC-B2 pcbAB/C-BSII
pcbAB/C-BSIII rEGFR-NGF-responsive-element renin-silencer-element alphaPAL/NRF-1-FMR1
IRF-1/IRF-2-BLV-U5 TR2-DR1-site Nkx2.5-CAR3-SBE1 Nkx2.5-CAR3-SBE2 Nkx2.5-CAR3-SR3
IL-5-RE-II Optimedin-Opts2 Optimedin-OPTp Optimedin-OptS1 Six5_CS2 mIL-10-CCT
Pax3-MITF Sox10-MITF-site-B Sox10-MITF-Site-C/D hiNOS-NRE prolactin-BTE
GRE(HOXA10) GZF1_CS white(eve)-GAGA FlrC-flaAp RVR_CS HiNF-P_CS kappa-DRL
WT1-VDR CYP19-palindrome IL-8-NRE PLZF-site-A PLZF-site-B PLZF-IL-3R PLZF-random-site
GATA-Dbeta1 LexA_CS10 LexA_CS9 LexA_CS11 StAR-SRE-5 StAR-SRE-3 StAR-SRE-2
Sox9-Vanin SF-1-Vanin-site-1 SF-1-Vanin-site-2 HIV-1-NH E2A-Pip_site E47/Pip-uE4
c-Myb_CS5 c-Myb_CS6 cysK-CBS-K1 PTalpha-proximal-ERE PTalpha-distal-ERE
pstS-pho-box-1 pstS-pho-box-2 SP-A2-GT-box SP-A-MBS MOK2_CS2 cspA-DNA-site
SLD-12 Tbeta5-TCR-beta Oct-1-GnRH Nit2-niaD-niiA SOX9-CRTL1 HTLV-TRES2
NFAT-Lymphotactin-E1 StAR-SFB-1 StAR-SFB-2 StAR-SFB-3 StAR-SFB-4 StAR-SFB-5
Dri_CS ADA-FP1 ADA-FP2 ADA-FP3 lactogen-DF3 lactogen-DF4 ADA-NF2-ADA-APRC
ADA-HS-D-G1 ADA-HS-D-FP-2 ADA-HS-D-FP-3 Snail2-Ebox-2 AP-1-rANF ANF-NK2-site
PLOD1-Bic-NKE ANF-SRE/114 ANF-SRE/406 AFN-PERE GATA4-ANF APP-E3 APP-amyloid-CAGA
USF-ADAM10 apoE-ABEF1 SMalpha-actin-ATTA zen-VRR-AT2 GABP-HIV-1-variant
BKV-site-A BKV-site-B BKV-site-C BKV-site-F Pax6-alphaA-crystallin apoE-URE3
mAda-MSPE SURE1 AMYBOX1 AMYBOX2 PTF1-CS PTF1-mELA2 PTF1-rCPA-90 PTF1-rCPA-142
PTF1-rCtrb PTF1-mTrpd HNE-30bp-element Apo-hME.1/2 Apo-mME H3.3B-CRE/TRE
Nkx-2.2-Insulin-site-1 Pdx1_CS Pax-4-rInsIC2 COIN-1 Runx2-D1-HDRE Runx2-D2-HDRE
Runx2-D3-HDRE Rapsyn-Kaiso-box-1 Rapsyn-Kaiso-box-2 NF-kB-urokinase UF1-H3beta-HNF-3-2
UF1-H3beta-CS diodinase-JRE TR/RXR-deiodinase PHO_CS E2F-ATFa ATFa-IRE
p53-RAI3-BS1 p53-RAI3-BS2 p53-RAI3-BS3 dmU7-PSE-A dmU7-PSE-B CWM-T15-E-box
tsh-FP-site-1 tsh-FP-site-2 tsh-FP-site-3 tsh-FP-site-4 tPACRE pBS-MRE=s
rInsI-CEB rInsII-CEB hIns-CEB hCMV-negative-element YB-1-E2 GCSI glucagon-IS
glucagon-E3 glucagon-E2 VMD2-E-box-1 Haptoglobin-IL6RE CTCF-144-1 Pdx-1-CMV-IE
Pdx-1-CMV-IE-2 SAA-SAF-binding-element SP-d-NFAT-I TTF-1-SP-D Rpe65-1AP-4
Rpe65-2AP-4 Oct-1-Rpe65 HNF-6-HNF-4 HNF-1-HNF-4 HBP1-hCD2 HBP1-N-myc-1
HBP1-N-myc-2 HBP1-N-myc-3 ZnT1-MRE-a ZnT1-MRE-b hAPP-PRE hAPP-URE-93 lyn-Ets-site
NERF-CS adipsin-ORE HBVEnII-NRE NREBP/SON-CS GPEI LMP1-Jkappa LMP-1-ISRE
Rta_CS Fbx15-oct-site Sox2-Fbx15 beta-spectrin-site-1 beta-spectrin-site-2
beta-spectrin-site-3 hCAR-GRE NF-kB-RACK1 OMP-SIE AgammaSTAT C/EBP-mHpx
C/EBP-rHpx TR4RE-HBV TonEBP/OREBP-core-CS mLPH-mG1 hLPH-hG1 hLPH-hG2 araC-araI1
carP1-carAB-1 rpoD18CS U6-PSE U1-PSE U2-PSE renin-bc-element Ear2-motif
rInsulin-R3 PDX-1-rInsulin UL127-WH-site suHW-UL127 prodynorphin-DRE DRE-CS
HLA-A2-ISRE UCP1-41WT Dof1-OP1 OBP1-GST6 PPRE-CS aP2-PPRE PEPCK-PPRE ME-PPRE
hCIITA-pIRF Blimp-1_CS1 Blimp-1_CS2 Amy32b-O2S O2-zE19 GLM_motif hor2-GLM
FXRE_CS FTZF1-RE Tcf-T-1 Tcf-T-2 Tcf-Xbra-1 Tcf-Xbra-2 hH3/k-m4-CCAAT
hH3/k-m7-CCAAT hH3/k-m8-TATA hH3/m-m3-CCAAT hH3/m-m8-TATA hH3/k-proximal-CCAAT
hH3/k-distal-CCAAT epsilon-GSM CIITA-proximal-site LSF-TS LSF-TS-2 TS-28bpR
beta-MHC-repressor-site beta-MyHC-betaF1 beta-MyHC-C-rich-element beta-MyHC-3'-site
rAchR-epsilon-NRE mAchR-epsilon-NRE mAChR-delta-NRE mNT-3-NRE Snail1-Snail1
RBF1-RB TR2RE-SV40 CNTFR-DR1 NCAE-TR3 ADH-1-box-B UPRE chk-YB-2-RSV
mIRF-1-DPE hIRF-1-DPE rWAP-FP2 rWAP-FP1 HLA-F-ISRE HLA-G-ISRE pIRE/Myd
fibronectin-Feec1 ISG56-ISREII ISG56-ISREI RE1-hCACNA1A-site-A RE1-hCACNA1A-site-B
RE1-hCACNA1A-site-C RE1-hCACNA1A-site-D RE1-mCACNA1A-site-A RE1-mCACNA1A-site-B
RE1-mCACNA1A-site-C RE1-mCACNA1A-site-D cVIT-II-DBP-site Pit-1-RDE Ku86-XOR
XOR-E-box Fshr-site-7 Fshr-FP2 Fshr-FP3 Fshr-FP4 Fshr-FP5 TAT-11/2A TAT-11/2B
TAT-11/3 alphaA-crystallin-PE1B Fis-site-VI Fis-site-V Fis-site-IV Fis-site-III
Fis-site-II Fis-site-I IHF-Fis KIR2DL4-FP-A KIR2DL4-FP-B KIR2DL4-FP-C
KIR2DL4-FP-D KIR2DL4-FP-E KIR2DL4-FP-F KIR2DL4-FP-G KIR3DL1-FP-A KIR3DL1-FP-B
KIR3DL1-FP-C KIR3DL1-FP-D KIR3DL1-FP-E KIR3DL1-FP-F avenin-conserved-sequence
dicot-conserved-sequence GHRH-site-1 GHRH-site-2 GHRH-site-3 glucagon-G5
glucagon-G1-50 dpp-Bin-I dpp-Bin-II dpp-Bin-III H4-box-CS hH10-H4-box xH10-H4-box
Fur-fepB Fur-entS Fur-FFFF Fur-FFxRR LORE-element MAPB1B-neuronal-element
MN-PR5 MN-PR4 MN-PR3 MN-PR2 MN-PR1 TRAIL-ISRE insulin-A3 insulin-II-E1
carP1-carAB-2 so-CS soAE soEY MIZ-1b_CS MIZ-1c_CS Mad4-initiator
CEBPB-site-II CEBPB-site-I AP-1-4F2HC NF-4FC_RS NF-4FA-m4F2HC NF-4FB-m4F2HC
AP-1-m4F2HC GATA-1-calponin TTF-1-TSHR-upstream TTF-1-TSHR-downstream TTF-1-CaSR-C
TTF-1-CaSR-A TTF-1-CaSR-B TTF-1-CAM-III-A TTF-1-CAM-III-B TTF-1-E-CAD-A
TTF-1-CT/CGRP-C HNF-1-alpha-fibrinogen HNF-1-factor-VIII UIRR-GATA OE-1-II-1
OE-1-II-3 OE-1-II-4 SRF-Actn1 SRF-Actr3 SRF-Atp2a2 SRF-Cfl1 SRF-Cfl2 SRF-Coro1a
SRF-Dtn1 SRF-Efha1 SRF-Enah SRF-Enh SRF-Flnc SRF-Hspb7 SRF-Itga5 SRF-Itgb1bp2
SRF-Pln SRF-Sdc4 SRF-Tln SRF-Tnnc1 SRF-Trip6 SRF-Copeb SRF-Etv1 SRF-Flh1
SRF-Hoxc6 SRF-Lef1 SRF-Nfatc4 SRF-Nfyb SRF-Ring1 SRF-Tcfap2b SRF-Adm SRF-Ctgf
SRF-Dm15 SRF-Dusp6 SRF-Igf2 SRF-P2rx1 SRF-Rrad SRF-Bin1 SRF-Dnajb1 SRF-Car3
SRF-Urod SRF-D14Ertd231e SRF-Impact AKAP12alpha-CArG1Fr AKAP12alpha-CArG2Fr
CFTR-CArG-site SMHC-conserved-sequence SHMC-CArG*-likeII SHMC-CArG*-likeI
SHMC-FP-II SHMC-FpIII LTC4S-distal-CACCC CFDD-site-1 CFDD-site-2 CFDD-site-3
RORalpha-RevDR2 Galphai2-ARE NQO1-ARE mAFP1-22bp-intronic-site mAFP1-44bp-intronic-site
HNF4-insulin-HBE p53-mdm2_1 p53-mdm2_2 p53-bax p53-mmp2 p53-gdf15_1 p53-gdf15_2
p53-gtse1 p53-gml p53-scara3 p53-rrm2b p53-pmaip1 p53-tp53inp1 p53-tnfrsf10b
p53-p53aip1 p53-tp53i3 p53-bbc3 p53-tnfrsf6 p53-igfbp3 p53-sfn p53-MAP4K4-1
p53-MAP4K4-2 p53-MAP4K4-3 p53-BCL2L14/BCL-G p53-BBC3/PUMA p53-COL18A1-1
p53-COL18A1-2 p53-COL18A1-3 p53-COL18A1-4 claudin7-Ets-site Nkx-2.5-hdio2-1
Nkx-2.5-hdio2-2 Smad7-BRE-1-box-1 Smad7-BRE-1-box-2 Smad7-BRE-1-box-3 MBP-Fyn-response-element
TCR-betaE5 hTLR9-R1 hTLR9-R2 hTLR9-R3 hTLR9-R4 Nkx-6.1-PBE MIEP-RARE MIEP/E-VRS1
NFkB-FGFR4 AP2-FGFR4 Isg20-E-box Isg20-ISRE C/EBP-IE1/2 CYP1A1-GRB mCYP1A1-XRE2
mCYP1A1-XRE1 uPA-e-CRE-1 uPA-e-CRE-2 uPA-e-CRE-3 DMef2-DmiR-1 LF-AFP
Pur-1-proximal-CT MRP2-YY1-site insulin-A5/core insulin-Zpal GATA-1-E-box
GATA-1-GATA-site ISG54-ISRE_(1) 2'-5'-OAS-ISRE MAZ_CS MLP-MAZ-site-1
MLP-MAZ-site-2 MLP-MAZ/Sp1-site-1 MLP-MAZ/Sp1-site-2 Fgf-3-PS4A-SOX-site
Fgf-3-PS4A-GATA-site Hox-2.5-DRE2 Hox-2.5-DRE1 ALAS-IRE IRF7-ISRE IRF7-IRFE
ME-TRE alpha2M-ORRE-DR1 alpha2M-ORRE-DR2 SF-1-alpha2M Smad-Race Zen-Race
BPC1-STK-site-1 BPC1-STK-site-4 BPC1-STK-site-7 BPC1-STK-site-8 BPC1-STK-site-9
BPC1-STK-site-10 BPC1-STK-site-12 Box-P-CS Box-L-CS OLE1-O2R-GATA I-BABP-FXRE
PLTP-FXRE SHP-FXRE BSEP-FXRE ApoC-II-FXRE CYP7A1-LXRE ABCG1-LXRE1 ABCG1-LXRE2
ABCA1-LXRE CETP-LXRE SREBP-1c-LXRE LXRalpha-LXRE LPL-LXRE GluB-AACA-2 KLF2-SSRE
PPAR/RXR_CS c-Ski-GTCT/2-CS c-Ski-GTCT/1.5-CS Uga3-UGA1 Leu3-LEU2 UGA1-LEU2-hybrid
LEU2AAGG apoB-element-II D1-kappaB2 erpG-site-1 erpG-site-2 MPBF_CS mammary-specific-CS
mammary-specific-CS2 milk-box-CS1 milk-box-CS2 IKKi-kappaB glucagon-G3A-PISCES
Cctq-CQE1 Ccta-CAE2 Ccta-CAE1 BR-C-dronc-D4 BR-C-dronc-D5-1 BR-C-dronc-D5-2
BR-C-dronc-D6 CYP1A1-DXE1 CYP1A1-DXE2 CYP1A1-DXE3 CYP1A1-DXE4 CYP1A1-DXE6
rCYP1A1-XRE1 rCYP1A1-XRE2 CYP1A1-XRE3 alpha-actin-MCAT-1 alpha-actin-MCAT-2
ARRM W-box mimecan-ISRE-b mimecan-ISRE-c P1-IRF AP-1-ST3 C/EBP-ST3
ANF-NKE MRF-ACCbeta IRSB7 norR2-CRE1 norL-CRE2 AFLR_motif MUC1-ERE-1
MUC1-ERE-2 MUC1-ERE-3 MUC1-ERE-4 MUC1-ERE-5 MUC1-ERE-6 CYP1B1-XRE1/XRE2
CYP1B1-XRE3 CYP1B1-XRE4 CYP1B1-XRE5 IFNA2-PRDIII/PRDI SZF-1_RS ZBRK1_RS
E1A-E2FII ICSBP-pIRE IRF-1/pIRE MIG-pIRE GBP/GAS-pIRE Ino2/Ino4-pNB603
dorsal-tld-1 dorsal-tld-2 dorsal-tld-3 PACM_motif OctT3-S6-1-CS OctT3-S6-3-CS
MGMT-cis9 BCE-1-region-II UBP-BCE-1 ACO-SURE2 DRalpha-S-box DRalpha-Y-box
IRF8-GAS CysC-IECS FREAC-2_CS FREAC-2_CS2 NRF-1_CS2 Elk-1_CS NK-Y_CS ATF3_CS
YY1_CS2 GABP_CS c-Ets-2_CS SREBP-1_CS E4F1_CS2 CHX10_CS ESRRA_CS E4BP4_CS
RSRFC4_CS NF-E2_CS2 MEF-2_CS3 ERR-alpha_CS STAT5A_CS MEIS1_CS Oct-X_CS
Sox-9_CS FREAC-2-CC10-distal FREAC-2-CC10-proximal APP-UE PSEN1-Ets-like-site
APOE-PET mim-1-MRE-A_2 PR264-MRE-C MZF1-munc18-1 Sp1-munc18-1 Sp1-COL1A1-s
CBFA1-CE1-site-a CBFA1-CE1-site-b hIGFBP-1-HRE-1 hIGFBP-1-HRE-2 hIGFBP-1-HRE-3
DR4-1 DR4-2 RORE_2 GPVI-S227 GPVI-G177 GPVI-E48 zen-M1 zen-M2
zen-M3 zen-M4 zen-M5 zen-M6 zen-M7 zen-M8 zen-M9 zen-M10
MD_site twist_site MCK-R_site MyoD:E12_CS Twi:E12_CS hA2M-IL6RE-2 hgamma-fib-IL6RE
Txk-IFN-gamma PAI-1-HRE-2 PAI-1-HRE-1 MIS-RE1 EGFR-VDRE INSM1_CS RFX2-H1tpal
RFX-mSgy RFX-mLamin-c2 cSnail-E7 cSnail-E6 cSnail-E5 XOR-TATA Fbp1-element-A
Cyp2a5-XRE rA2M-IL6RE-2 alpha1-ACT-IL6RE mJunB-IL6RE hLink-protein-GRE
rLink-protein-GRE rLP-AT-rich-element GAGA-Ubx-site-1 GAGA-Ubx-site-2 GAGA-Ubx-site-3
GAGA-Ubx-site-4/5 Col2a1-R2-element EP2 RocR_RS rocG-rocABC-UAS1
rocG-rocABC-UAS2 CTCF-S-2.4-F1 CTCF-144 CTCF_core_motif Ets-GRU-site-A
Ets-GRU-site-B LINE-DE2 IRF-1-DE1 DE1-CS HOF-S17 HOF-S54 HOF-S63 Tcf4-CS
APCDD1-TBM1 APCDD1-TBM2 PREd-site-1 PREd-site-2 PREd-site-3 PREd-site-4
PREd-site-5 PREd-site-6 PHO-en FPGS-S1 FPGS-S2 FPGS-S3 FPGS-S4 FPGS-H1
Ets-1-c-Myb LSE-6 LPL-CT-element LXR-LPL-DR4.1 LXR-LPL-DR4.2 PR-1-LS7
PR-1-LS5 CAD1-A-W-motif CAD1-C3-W-motif PPARg-HGF CEBPB-TGA1 hBNP-GATA
PI-9_ERU PAI-2-TRM Nov-conserved-element NT2-Col11a2 CTF/NF-1-AP-2 AP-2-AP-2
Oct-AP-2 AP-2-initiator Endo16-CG-1 Endo16-CP-1 Endo16-Otx-1 Endo16-Z-1
Endo16-CG-2 Endo16-GCF1-1 Endo16-CG-3 Endo16-CG-4 Endo16-GCF1-2 Endo16-GCF1-3
C4PEPC-site-a C4PEPC-site-b C4PEPC-site-f C4PEPC-site-g C4PEPC-site-h PDP1-S
PDP1-W SnaH-aromatase-CREaro snail-s2 Kr1-site bcd1-site rho-E1 rho-E2
rho-E3 rho-E4 ED-L2/GKLF K4/GKLF GATA-1-rAPP-URE hAPOA5-DR1 OC-box
Skn7p_RS cMG1-oligo-F BETA2/NeuroD-NNAT-1 BETA2/NeuroD-NNAT-2 BETA2/NeuroD-NNAT-3
rNIS-W rNIS-N2 NKE-2 Tcfl5-calmegin collagenase-3-RD-site c-Krox-Balpha1(I)-collagen
c-Krox-Balpha2(I)-collagen c-Krox-264alpha2(I)-collagen c-Krox-CCAATalpha2(I)
HB-Ubx-PRE-1 HB-Ubx-PRE-2 HB-Ubx-PRE-3 HB-Ubx-PRE-4 HB-Ubx-PRE-5 HB-Ubx-PRE-6
HB-Ubx-PRE-7 HB-Ubx-PRE-8 HB-Ubx-PRE-9 HB-Ubx-PRE-10 HB-Ubx-PRE-11 HB-Ubx-PRE-12
HB-Ubx-PRE-13 HB-Ubx-PRE-14 HB-Ubx-PRE-15 HB-Ubx-PRE-16 HB-Ubx-PRE-17 zeste-Ubx-PRE-1
zeste-Ubx-PRE-2 zeste-Ubx-PRE-3 zeste-Ubx-PRE-4 zeste-Ubx-PRE-5 zeste-Ubx-PRE-6
zeste-Ubx-PRE-7 zeste-Ubx-PRE-8 zeste-Ubx-PRE-9 zeste-Ubx-PRE-10 zeste-Ubx-PRE-11
zeste-Ubx-PRE-12 zeste-Ubx-PRE-13 zeste-Ubx-PRE-14 zeste-Ubx-PRE-15 PHO-Ubx-PRE-1
PHO-Ubx-PRE-2 PHO-Ubx-PRE-3 PHO-Ubx-PRE-4 PHO-Ubx-PRE-5 PHO-Ubx-PRE-6 GAGA-Ubx-PRE-1
GAGA-Ubx-PRE-2 GAGA-Ubx-PRE-3 GAGA-Ubx-PRE-4 GAGA-Ubx-PRE-5 GAGA-Ubx-PRE-6
GAGA-Ubx-PRE-7 GAGA-Ubx-PRE-8 GAGA-Ubx-PRE-9 GAGA-Ubx-PRE-10 GAGA-Ubx-PRE-11
GAGA-Ubx-PRE-12 UGT2B17-Pbx UGT1A8-HNF1 UGT1A8-Cdx2 UGT1A10-Cdx2 AGL15_RS
EUO_CS RegR-box Hoxd-12-Shh-1 Hoxd-12-Shh-2 Hoxd-12-Shh-3 Hoxd-12-Shh-4
HNF3-Shh Cdc5_RS Nkx-3.1-TAAGTA Nkx-3.1-mut2 KBE Fis-rrnA-I Fis-rrnA-II
Fis-rrnA-III Fis-rrnA-IV Fis-rrnB-I Fis-rrnB-II Fis-rrnB-III Fis-rrnC-I
Fis-rrnC-II Fis-rrnC-III Fis-rrnD-I Fis-rrnD-II Fis-rrnD-III Fis-rrnD-IV
Fis-rrnD-V Fis-rrnE-I Fis-rrnE-II Fis-rrnE-III Fis-rrnE-IV Fis-rrnE-V Fis-rrnG-I
Fis-rrnG-II Fis-rrnG-III Fis-rrnH-I Fis-rrnH-II Fis-rrnH-III Fis-rrnH-IV
so-lz-first so-hh-first so-hh-second COL1A1-G2046 COL1A1-2046T SF-1-RA
HCMV-IES-Nru-WT0 HCMV-IE5-Nru-WT1 HCMV-IE5-Nru-WT3 HCMV-IE5-WT7 scs'-D-site
cBE76a cBE76b cBE28a cBE28b cBE51 scs'-B-site Pet-1_CS 1.28-DRE-DBS1
1.28-DRE-DBS2 1.28-DRE-DBS3 1.28-DRE-DBS4 DEAF-1-1.28-DRE-1 DEAF-1-1.28-DRE-2
DEAF-1-1.28-DRE-3 DEAF-1-1.28-DRE-4 DEAF-1-1.28-DRE-5 DEAF-1-1.28-DRE-6
DEAF-1-1.28-DRE-7 DEAF-1-1.28-DRE-8 5-HT2AR-FP1 5-H2TAR-FP2 5-H2TAR-FP3
Cited2-DBE Cited2-SRE HA-core-site SAAB-core-site Soule-MLV-core Moloney-MLV-core-site
Akv-core-site MCF247-core-site Rauscher-MCF-core-site TCRgamma-core-site
TCRalpha-core-site MX-core-site TCRbeta-core-site SS4-core-site Mo(core)-core-site
RXR/TR_CS RXR/VDR_CS SAA1-TSR-AP-2d SAA1-TSR-AP-2p Pactolus-probe-38 MtBF_CS
Mt_motif MtBF-A/T MuFL1 MuFL2 MuMt4 MEF2(Des) MuMyoD1_(Des) MuMt5
MHox_CS Col11A2-B/C-enhancer Col11A2-D/E-enhancer Col11A2-F/G-enhancer
GSTA2-PPRE1 GSTA2-PPRE2 GSTA2-PPRE3 P4Halpha(I)-E-box YY1-grp78 ZNF202-ApoAIV
ZNF202-ApoCIII ZNF202-LPL ZNF202-CRABP2 ZNF202-HTGL ZNF202-P16/ALT ZNF202-CALRT1
ZNF202-PLTP ZNF202-IA-1 ZNF202-PLP ZNF202-PNMTA ZNF202-LCAT ZNF202-GOS24
ZNF202-Beta3AR ZNF202-VEGP1 ZNF202-ApoE lysozyme-F2-DIV-6 arrestin-DR12-element
DR+1-PPRE PPARgamma3-C681G CD36-PPRE-G CD36-PPRE-J PPARA-HNF4RE DR-5
DIV-6 INV-0 rMHC-HRE MyoD-HRE alpha-actin-HRE rGH-HRE beta-RARE-SET
5-HTT-VNTR-RP6/7 5-HTT-VNTR-RP3/4 ROR-alpha/beta_CS PNRalpha-CS GATA-4-BMAL1
FBP1-URS1 TAC1-BT2 Sup-Ep1 phiAP3-E1A BTEB-alphaI-collagen TACPyAT-motif
gamma-globin-SSE ERK2-GCII ERK2-GCI ERK2-CAAT-box ProDH-PRE OVO_CS RB-RBF1
twist-rho GATA-5-PR Fshr-Site7/DHS3 myocilin-B-element HMG-1-31BP HMG-I/Y-31BP
E2F-NPAT-I E2F-NPAT-II PTN-HBS AchE-N-int-1 C/EBP-IL12-HSS1 Oct-1/2-IL12-HSS1
HIF-1-1-PGK1 HIF-1-2-PGK1 HIF-1-3-PGK1 HIF-1-1-Glut1 HIF-1-2-Glut1 HIF-1-EPO
CaSRE4 Foxa2-CE-CS3 CSBP-2-epsilon-globin-1 CSBP-2-epsilon-globin-2 CSBP-2-epsilon-globin-3
CSBP-2-FP18-HS3 CSBP-2-FP6-HS3 CSBP-2-FP8-HS3 CSBP-2-CS HOXB2-Otx2 Otx2-HBE1
Villin-Ets/SRE epsi-proximal Sox6-epsilon-globin-S1 Sox6-epsilon-globin-S2
Ubx-sal-1 Ubx-sal-2 Ubx-sal-3 Ubx-sal-4 Ubx-sal-5 Ubx-sal-6 Ubx-sal-7 AP2-alpha-INT3
AP2-alpha-FlinkG AP2-alpha-1C AP2-alpha-1C9G AP2-alpha-1A AP2-alpha-1T
AP2-alpha-3T AP2-alpha-4A AP2-alpha-4T AP2-alpha-4G AP2-alpha-5A AP2-alpha-4T5A
CTCF_CS CTCF-Stin2.12-VNTR Brn-2-CS RXR-ADAM10 TCF4-SMC3 LR1-Slambda1
LR1-Emu LR1-FpA LR1-FpB Lz-dpn-site-1 Lz-dpn-site-2 Lz-D-Pax2 Runx_CS2
SISB/Da-CS1 SISB/Da-CS2 SISB/Da-Sxlp(e)-site-2 SISB/Da-Sxlp(e)-site-9 SISB/Da-Sxlp(e)-site-1
SISB/Da-Sxlp(e)-site-4 SISB/Da-Sxlp(e)-site-5 SISB/Da-Sxlp(e)-site-6 L-RAP-IRF-E
Rpx-dTAAT Rpx-pTAAT Pitx2-Rhx Rhx-GATA H1t/TE2 Ht1/GC Ht1/TE1 STAT5-WAP
HBP1-p47-phox hCD2-HSS3-FT1 hCD2-HSS3-FT2 eNOSM1-786C eNOSW1-786T B29-A+T-rich-element
BSN4 BSN7 BSN8 BSN12 BSN20 BSN15 BSN5-1 BSN17
BSN3 BSN5-2 BSN11 BSN18-3 BSN1 BSN6 BSN9 BSN13
BSN14 BSN18-1 BSN18-2 mafK-GATA-site-1 mafK-GATA-site-2 mafK-GATA-site-3
mafK-GATA-site-4 zen-ZD1 zen-ZD3 zen-B2 zen-B3 zen-B4 zen-B5
zen-B6 ANF-AT-580 ANF-AT-110 Cdx_CS YY1_CS4 SOD-1-nTRE APP-tre KLF15-AceCS2
Sp1-AceCS2 TCF-4-versican iNOS-ISRE EIRE EICE IECS cystatin-C-IECS
cIAP2-CDE/CHR Gbp-GAS Gbp-IRE-1 Gbp-IRE-2 PIII-EICE ZBRK1-ANG1 Tbx2-TBE
Tbx2-N-myc1 Tbx2-N-myc1-2 Tbx2-N-myc1-3 Tbx2-N-myc1-4 Tbx2-N-myc1-5 OsCBT_CS
THABS alphaNAC-RS VpreB-2 VpreB-5 VpreB-7 Oct4-PE2 Oct4-Nanog Sox2-Nanog
CD11a-MS7-RUNX-site C/EBP-CD11a-MS7-C/EBP AFT1-TIS11-1 AFT1-TIS11-2 AFT1-HMX1-1
AFT1-HMX1-2 AFT1-HMX1-3 AFT1-COT1 AFT1-SMF3 AFT1-VHT1 ADA-FP2a ADA-FP2c
ADA-FP2d ADA-FP4 ADA-FP5 EGFR-BTEB1 ST3-DR4 PAI-1-kappaB CP2-GATA-1-HS2-1
GATA-1-p45-NF-E2 GATA-1-EKLF CP2-p45-NF-E2 CP2-EKLF ANF-NBI ANF-NBIII
rPAEC-VEGF-HRE E2F-muCDC7-1 E2F-muCDC7-2 Sp1-hASK-proximal ASK-MP4 rBNP-proximal-GATA
rBNP-distal-GATA rHemopexin-IL6RE hHemopexin-IL6RE rHemopexin-A-site hHemopexin-A-site
APP-Inr CTCF-APP CREB-PEN-2 Claudin-E1 Claudin-E2 C/EBP-IL-8 CCL25-Cdx-TATA
TFII-I-40/fos TFII-I-fos-SIE TFII-I-fos-SRE HBV-CpE NRE-SP-A C/EBP-hSP-D-432
C/EBP-hSP-D-340 C/EBP-hSP-D-319 C/EBP-hSP-D-140 C/EBP-hSP-D-90 27kD-zein-P-box
BLV-TxRE-distal BLV-TxRE-middle BLV-GRE NFkB-BLV-1 NFkB-BLV-2 Stat3-epsilon5u
Stat3-beta5u Stat3-Agamma-globin H-2L-ISRE ZFX-HLA-A11-1 ZFX-HLA-A11-2
diptericin-ICRE Dif-CG15065 Dif-CG13422 Smuc-SMU Smuc-MCK1 Aie-tbs lbd3-WPE
MAZ-PTHR AP-1-IL-6 CREB-IL-6 NF-kB-IL-6 LCAT-IL6RE AAT-ORE CPSI-GAG-element
FoxA-TTR FoxA-H19-E1D-a FoxA-H19-E1D-f EPHX1-reversed-CCAAT

(Linear) MAP of: gi-134133319277-1662.seq check: 4461 from: 1 to: 1386

gi|134133319:277-1662 Homo sapiens nuclear receptor subfamily 1, group H, member
2 (NR1H2), mRNA

With 270 enzymes: *

June 29, 2010 22:31 ..

CviKI-1
PspGI
StyD4I
BbvCI |
BstNI Bpu10I |
ScrFI NlaIV | |
BsaJI | BstNI BmgT120I| | |
PspGI | ScrFI CviKI-1| | |
StyD4I | BslI| HaeIII| | |
BssSI BciVI | | PspGI|| Sau96I|| | |
MnlI XcmI | | StyD4I|| BslI ||| DdeI |
| | | | ||| | ||| | |
ATGTCCTCTCCTACCACGAGTTCCCTGGATACCCCCCTGCCTGGAAATGGCCCCCCTCAG
1 ---------+---------+---------+---------+---------+---------+ 60
TACAGGAGAGGATGGTGCTCAAGGGACCTATGGGGGGACGGACCTTTACCGGGGGGAGTC

a M S S P T T S S L D T P L P G N G P P Q -
b C P L L P R V P W I P P C L E M A P L S -
c V L S Y H E F P G Y P P A W K W P P S A -

NciI
ScrFI
SmaI
BmeT110I|
BsaJI|
HpaII|
NciI|
ScrFI|
AvaI||
BsaJI||
BslI||
StyD4I||
XmaI||
BmgT120I|||
CviKI-1|||
HaeIII|||
StyD4I|||
HphI Sau96I||||
BseMII| BsaJI |||||
BspCNI|| BseRI |||||
BbeI||| BtgI |||||
HaeII||| CviKI-1| |||||
MboII||| NlaIV|| |||||
HhaI|||| HpaII ||| |||||
GlaI||||| Hpy188III ||| |||||
NlaIV||||| BsaWI| ||| |||||
SfoI||||| BspEI| ||| |||||
BsaHI|||||| BmgT120I|| ||| |||||
HinP1I|||||| NlaIV|| ||| |||||
MboII|||||| AvaII||| ||| |||||
MnlI|||||| Sau96I||| ||| |||||
NarI|||||| TaqII |||| ||| |||||
BanI||||||| BceAI | |||| ||| |||||
KasI||||||| MnlI | | |||| ||| |||||
BstNI |||||||| TspRI | | |||| ||| |||||
ScrFI |||||||| HpyCH4III | | | |||| ||| |||||
BslI| |||||||| HpyAV MnlI | | | |||| ||| |||||
|| |||||||| | | | | | |||| ||| |||||
CCTGGCGCCCCTTCTTCTTCACCCACTGTAAAGGAGGAGGGTCCGGAGCCGTGGCCCGGG
61 ---------+---------+---------+---------+---------+---------+ 120
GGACCGCGGGGAAGAAGAAGTGGGTGACATTTCCTCCTCCCAGGCCTCGGCACCGGGCCC

a P G A P S S S P T V K E E G P E P W P G -
b L A P L L L H P L * R R R V R S R G P G -
c W R P F F F T H C K G G G S G A V A R G -

BbvI
Tth111I|
BplI ||
BseMII| ||
BspCNI|| ||
BlsI ||| ||
FokI ||| ||
PstI ||| ||
BisI| ||| ||
Fnu4HI| ||| ||
GluI| ||| ||
HpyCH4V|| ||| ||
TseI|| ||| ||
Cac8I ||| ||| ||
NlaIV SfcI ||| ||| ||
BmgT120I| MwoI| ||| ||| ||
AvaII|| CviKI-1|| ||| ||| ||
Sau96I|| MwoI ||| ||| ||| ||
HpaII ||| SetI ||| ||| ||| ||
Hpy188III ||| BlpI| ||| ||| ||| ||
BsaWI| ||| DdeI| ||| ||| ||| ||
BspEI| ||| BstNI AluI|| ||| ||| ||| ||
BmgT120I|| ||| ScrFI CviKI-1|| ||| ||| ||| ||
NlaIV|| ||| BsaJI | Cac8I ||| ||| ||| ||| ||
AvaII||| ||| PspGI | CviKI-1 | ||| ||| ||| ||| ||
BsmFI||| ||| StyD4I |AlwNI HaeIII | ||| ||| ||| ||| ||
Sau96I||| ||| DrdI | |MnlI|TspRI | | ||| ||| ||| ||| ||
|||| ||| | | | || | | | ||| ||| ||| ||| ||
GGTCCGGACCCTGATGTCCCAGGCACTGATGAGGCCAGCTCAGCCTGCAGCACAGACTGG
121 ---------+---------+---------+---------+---------+---------+ 180
CCAGGCCTGGGACTACAGGGTCCGTGACTACTCCGGTCGAGTCGGACGTCGTGTCTGACC

a G P D P D V P G T D E A S S A C S T D W -
b V R T L M S Q A L M R P A Q P A A Q T G -
c S G P * C P R H * * G Q L S L Q H R L G -

CviKI-1
GsaI
SfaNI |
ApaI| |
BanII| |
Bme1580I| |
Hpy188III Bsp1286I| |
BstKTI| BseYI|| |
MnlI| BmgT120I||| |
DpnI|| CviKI-1||| |
EarI|| HpyAV HaeIII||| |
BstYI ||| Cac8I | NlaIV||| |
MboI ||| HhaI | | BmgT120I|||| |
BmrI | ||| GlaI| | | Sau96I|||| |
AlwI | | ||| HinP1I|| | | EcoO109I||||| |
BtsCI | | | ||| MboII ||| | | PspOMI||||| |
BsrI| | | | ||| NlaIV | ||| | | Sau96I||||| | CspCI
|| | | | ||| | | ||| | | |||||| | |
GTCATCCCAGATCCCGAAGAGGAACCAGAGCGCAAGCGAAAGAAGGGCCCAGCCCCGAAG
181 ---------+---------+---------+---------+---------+---------+ 240
CAGTAGGGTCTAGGGCTTCTCCTTGGTCTCGCGTTCGCTTTCTTCCCGGGTCGGGGCTTC

a V I P D P E E E P E R K R K K G P A P K -
b S S Q I P K R N Q S A S E R R A Q P R R -
c H P R S R R G T R A Q A K E G P S P E D -

SetI
AluI |
CviKI-1 |
BssSI | |
MboII| | |
CviKI-1|| | |
HaeIII|| | | CviKI-1
BmgT120I||| | | BsmFI| HpyCH4IV
GsaI||| | | HpaII || Hin4I |
Sau96I|||| | | CviKI-1 | || BbvI | |
BceAI||||| | | BsaXI HaeIII | || BsaXI | |
BseYI |||||| | | Hin4I CspCI StuI | ||MnlI | | |
| |||||| | | | | | | || | | | |
ATGCTGGGCCACGAGCTTTGCCGTGTCTGTGGGGACAAGGCCTCCGGCTTCCACTACAAC
241 ---------+---------+---------+---------+---------+---------+ 300
TACGACCCGGTGCTCGAAACGGCACAGACACCCCTGTTCCGGAGGCCGAAGGTGATGTTG

a M L G H E L C R V C G D K A S G F H Y N -
b C W A T S F A V S V G T R P P A S T T T -
c A G P R A L P C L W G Q G L R L P L Q R -

BlsI
SetI
BisI|
Fnu4HI|
GluI| CviKI-1
AluI|| MwoI |
CviKI-1|| MboII | |
MspA1I|| HpyCH4V| | |
PvuII|| BlsI|| | | BstNI
TseI|| BisI||| | | ScrFI
HpyAV||| BseMII||| | | BsaJI CviKI-1 |
BsiHKAI |||| Fnu4HI||| | | BtgI HaeIII |
Bsp1286I |||| GluI||| | | BmgT120I | PspGI |
BbvI| |||| BspCNI|||| | | HhaI AvaII| | StyD4I |
BlpI| ||||CviKI-1|||| | | GlaI| BtsI| | BmgT120I| |
DdeI| |||| MwoI|||| | | TspGWI| FalI| | NlaIV| |
SetI || |||| TseI|||| | | HinP1I|| Sau96I| | Sau96I|| |
TaiI || ||||MwoI ||||| | | HpaII ||| TspRI| | BslI ||| |
| || |||| | ||||| | | | ||| || | | ||| |
GTGCTCAGCTGCGAAGGCTGCAAGGGCTTCTTCCGGCGCAGTGTGGTCCGTGGTGGGGCC
301 ---------+---------+---------+---------+---------+---------+ 360
CACGAGTCGACGCTTCCGACGTTCCCGAAGAAGGCCGCGTCACACCAGGCACCACCCCGG

a V L S C E G C K G F F R R S V V R G G A -
b C S A A K A A R A S S G A V W S V V G P -
c A Q L R R L Q G L L P A Q C G P W W G Q -

HhaI
GlaI|
HinP1I||
EciI TauI||
BspMI| BlsI|||
TspDTI|| BisI||||
NciI SetI ||| Fnu4HI||||
ScrFI BccI| ||| GluI||||
BsaJI| MwoI|| ||| AciI|||||
HaeII HpaII| NlaIV ||| ||| NlaIII|||||
HhaI| StyD4I|| AciI | ||| ||| HgaI ||||||
GlaI|| Cac8I |||BglI | | ||| ||| CviAII| ||||||
HinP1I||| MwoI| |||MwoI | | ||| ||| FatI|| ||||||
|||| || ||| | | | ||| ||| ||| ||||||
AGGCGCTATGCCTGCCGGGGTGGCGGAACCTGCCAGATGGACGCTTTCATGCGGCGCAAG
361 ---------+---------+---------+---------+---------+---------+ 420
TCCGCGATACGGACGGCCCCACCGCCTTGGACGGTCTACCTGCGAAAGTACGCCGCGTTC

a R R Y A C R G G G T C Q M D A F M R R K -
b G A M P A G V A E P A R W T L S C G A S -
c A L C L P G W R N L P D G R F H A A Q V -

HpyCH4V
HhaI |
FspI| |
GlaI| |
HinP1I|| |
BlsI||| |
MwoI||| |
BisI|||| |
Fnu4HI|||| |
GluI|||| |
CviKI-1||||| |
TseI||||| |
BtsI |||||| |
Cac8I |||||| |
NaeI |||||| |
TspRI |||||| |
HpaII| |||||| |
MwoI| |||||| |
BsrFI|| |||||| | BtsI
Cac8I NgoMIV|| |||||| | BtsCI TspRI
BbvI |MwoI ||| ||||||MnlI | MnlI HgaI | FokI |
| | | ||| |||||| | | | | | | |
TGCCAGCAGTGCCGGCTGCGCAAGTGCAAGGAGGCAGGGATGAGGGAGCAGTGCGTCCTT
421 ---------+---------+---------+---------+---------+---------+ 480
ACGGTCGTCACGGCCGACGCGTTCACGTTCCTCCGTCCCTACTCCCTCGTCACGCAGGAA

a C Q Q C R L R K C K E A G M R E Q C V L -
b A S S A G C A S A R R Q G * G S S A S F -
c P A V P A A Q V Q G G R D E G A V R P F -

BlsI
BisI|
Fnu4HI|
GluI|
TseI||
MboII BsaXI |||
HpaII| Hin4I |||
Hpy188III| MboII | ||| MlyI
BsaWI|| MboII | | ||| PleI|
BspEI|| Hpy188I| | | ||| HpyCH4III||
BstKTI|| MboII || | | ||| MaeIII||
DpnI||| HinfI | || | | ||| Tsp45I||
BstYI |||| TfiI | || | | |||MaeIII |||
AlwI | |||| AcuI | | || | | |||Tsp45I |||
Hpy188I | MboI ||||Eco57MI | | || | | |||HinfI|BbvI |||
| | | |||| | | | || | | ||| || | |||
TCTGAAGAACAGATCCGGAAGAAGAAGATTCGGAAACAACAGCAGCAGGAGTCACAGTCA
481 ---------+---------+---------+---------+---------+---------+ 540
AGACTTCTTGTCTAGGCCTTCTTCTTCTAAGCCTTTGTTGTCGTCGTCCTCAGTGTCAGT

a S E E Q I R K K K I R K Q Q Q Q E S Q S -
b L K N R S G R R R F G N N S S R S H S H -
c * R T D P E E E D S E T T A A G V T V T -

CviKI-1
MnlI |
BseMII| |
BstNI| |
ScrFI| |
BsaJI|| |
BspCNI|| |
CviKI-1||| |
HaeIII||| |
PspGI||| |
StyD4I||| |
BmgT120I|||| |
Sau96I||||| |
BbvI |||||| |
AlwNI| |||||| |
BbvI || |||||| |
CviKI-1| || |||||| |
BbvI || || |||||| |
SetI| || || |||||| |
BlpI|| || || |||||| |
DdeI|| || || |||||| |
TauI AluI||| || || |||||| |
BlsI| CviKI-1||| || || |||||| |
AciI|| BlsI|||| || || |||||| |
BisI|| BisI||||| || || |||||| |
Fnu4HI|| Fnu4HI||||| || || |||||| |
GluI|| GluI||||| || || |||||| |
CviKI-1||| MwoI|||||| || || |||||| |
HaeIII||| TseI|||||| || || |||||| |
BmgT120I|||| BlsI||||||| || || |||||| |
NlaIV|||| BisI|||||||| || || |||||| |
Sau96I||||| Fnu4HI|||||||| || || |||||| |
SetI |||||| GluI|||||||| || || |||||| |
Hin4I | |||||| TseI||||||||| || || |||||| |
BsaXI | | |||||| BlsI|||||||||| || || |||||| |
MaeIII | | | |||||| BisI||||||||||| || || |||||| |
Tsp45I | | | ||||||Fnu4HI||||||||||| || || |||||| |
HphI | | | | |||||| GluI||||||||||| || || |||||| |
HpyCH4III | | | | |||||| TseI|||||||||||| || || |||||| |
| | | | | |||||| ||||||||||||| || || |||||| |
CAGTCGCAGTCACCTGTGGGGCCGCAGGGCAGCAGCAGCTCAGCCTCTGGGCCTGGGGCT
541 ---------+---------+---------+---------+---------+---------+ 600
GTCAGCGTCAGTGGACACCCCGGCGTCCCGTCGTCGTCGAGTCGGAGACCCGGACCCCGA

a Q S Q S P V G P Q G S S S S A S G P G A -
b S R S H L W G R R A A A A Q P L G L G L -
c V A V T C G A A G Q Q Q L S L W A W G F -

MnlI
NciI |
ScrFI |
BbvI| |
BsaJI| |
HpaII| |
BanII|| |
Bsp1286I|| |
HpyAV|| |
StyD4I|| |
NlaIV||| |
CviKI-1|||| |
MwoI ||||| |
BstNI| ||||| |
ScrFI| ||||| |
BsaJI|| ||||| |
CviKI-1||| ||||| |
PspGI||| ||||| |
StyD4I||| ||||| |
BlsI|||| ||||| |
BisI||||| ||||| |
Fnu4HI||||| ||||| |
GluI||||| ||||| |
TseI|||||| ||||| |
Cac8I ||||||| ||||| |
AlwI | ||||||| ||||| |
Hpy188I | | ||||||| ||||| |
DdeI| | | ||||||| ||||| |
BstKTI|| | | ||||||| ||||| |
DpnI||| | | ||||||| ||||| |
BstYI |||| | | ||||||| ||||| |
MboI |||| | | ||||||| ||||| |
MnlI| |||| | | ||||||| ||||| |
BspCNI || |||| | | ||||||| ||||| |
BseMII| || |||| | | ||||||| ||||| |
BstNI| || |||| | | ||||||| ||||| |
ScrFI| || |||| | | ||||||| ||||| | SetI
BsaJI || || |||| | | ||||||| ||||| | AluI |
PspGI || || |||| | | ||||||| ||||| | CviKI-1 |
StyD4I || || |||| | | ||||||| ||||| | BpuEI | |
| || || |||| | | ||||||| ||||| | | | |
TCCCCTGGTGGATCTGAGGCAGGCAGCCAGGGCTCCGGGGAAGGCGAGGGTGTCCAGCTA
601 ---------+---------+---------+---------+---------+---------+ 660
AGGGGACCACCTAGACTCCGTCCGTCGGTCCCGAGGCCCCTTCCGCTCCCACAGGTCGAT

a S P G G S E A G S Q G S G E G E G V Q L -
b P L V D L R Q A A R A P G K A R V S S * -
c P W W I * G R Q P G L R G R R G C P A N -

Hpy188III BmgT120I
SmlI | CviKI-1
CviKI-1| | HaeIII
TauI| | TauI
BlsI|| | BlsI| BtsI
AloI||| | Sau96I| TspRI
BisI||| | BisI|| HpyCH4V |
Fnu4HI||| | Fnu4HI|| PstI | |
GluI||| | BstKTI GluI|| HpyCH4V | | |
AciI|||| | DpnI| BslI AciI||| BsaXI | | | |
MspA1I|||| | AlwI MboI || PflMI AloI||| SfcI | | | |MwoI
||||| | | | || | |||| | | | | | |
ACAGCGGCTCAAGAACTAATGATCCAGCAGTTGGTGGCGGCCCAACTGCAGTGCAACAAA
661 ---------+---------+---------+---------+---------+---------+ 720
TGTCGCCGAGTTCTTGATTACTAGGTCGTCAACCACCGCCGGGTTGACGTCACGTTGTTT

a T A A Q E L M I Q Q L V A A Q L Q C N K -
b Q R L K N * * S S S W W R P N C S A T N -
c S G S R T N D P A V G G G P T A V Q Q T -

BmrI
HhaI |
GlaI| |
HinP1I|| |
BsmFI ||| |
BstNI | ||| |
Hin4I | ||| |
ScrFI | ||| |
BsaJI| | ||| |
PasI| | ||| |
BsaJI|| | ||| |
PspGI|| | ||| |
StyD4I|| | ||| |
NlaIV||| | ||| |
BmgT120I|||| | ||| |
CviKI-1|||| | ||| |
HaeIII|||| | ||| |
MmeI||||| | ||| |
Sau96I||||| | ||| | BmeT110I
BstNI |||||| | ||| | AvaI|
CviKI-1 ScrFI |||||| | ||| | Hpy188III|
BsaXI | BsaJI | |||||| | ||| | AhdI ||
HpyAV| |MaeIII PspGI | |||||| | ||| | BsrI ||
Hpy188I || |Tsp45I StyD4I | |||||| | ||| | SfaNI ||
| || | | | | |||||| | ||| | | ||
CGCTCCTTCTCCGACCAGCCCAAAGTCACGCCCTGGCCCCTGGGCGCAGACCCCCAGTCC
721 ---------+---------+---------+---------+---------+---------+ 780
GCGAGGAAGAGGCTGGTCGGGTTTCAGTGCGGGACCGGGGACCCGCGTCTGGGGGTCAGG

a R S F S D Q P K V T P W P L G A D P Q S -
b A P S P T S P K S R P G P W A Q T P S P -
c L L L R P A Q S H A L A P G R R P P V P -

CviKI-1
HaeIII BstNI
MscI ScrFI
MwoI Cac8I | PfoI |
FauI| EaeI | PspGI |
Cac8I || SetI | StyD4I |
Hin4I| || AluI | | BccI | |
AciI || || CviKI-1 | | DdeI| | |
Cac8I || || BslI AlfI| | |TspGWI || | |
| || || | || | | | || | |
CGAGATGCCCGCCAGCAACGCTTTGCCCACTTCACGGAGCTGGCCATCATCTCAGTCCAG
781 ---------+---------+---------+---------+---------+---------+ 840
GCTCTACGGGCGGTCGTTGCGAAACGGGTGAAGTGCCTCGACCGGTAGTAGAGTCAGGTC

a R D A R Q Q R F A H F T E L A I I S V Q -
b E M P A S N A L P T S R S W P S S Q S R -
c R C P P A T L C P L H G A G H H L S P G -

BmgT120I
AvaII|
Sau96I|
BbvI ||
NciI | ||
ScrFI | ||
HpaII| | ||
CviKI-1|| | ||
HaeIII|| | ||
StyD4I|| | ||
BmgT120I||| | ||
GsaI||| | ||
MnlI|||| | ||
Sau96I|||| | ||
SetI||||| | ||
AluI |||||| | ||
BseYI |||||| | ||
BslI |||||| | ||
CviKI-1 |||||| | ||
MspA1I |||||| | ||
PvuII |||||| | ||
BlsI| |||||| | ||
PstI| |||||| | ||
Hpy166II BisI|| |||||| | ||
BseMII | Fnu4HI|| |||||| | ||
BstKTI | BstNI GluI|| |||||| | ||
BspCNI| | ScrFI HpyCH4V||| |||||| | ||
DpnI| | BlpI PspGI | TseI||| |||||| | ||
MboI || | DdeI StyD4I | SfcI |||| |||||| | ||MboI
| || | | | | | |||| |||||| | || |
GAGATCGTGGACTTCGCTAAGCAAGTGCCTGGTTTCCTGCAGCTGGGCCGGGAGGACCAG
841 ---------+---------+---------+---------+---------+---------+ 900
CTCTAGCACCTGAAGCGATTCGTTCACGGACCAAAGGACGTCGACCCGGCCCTCCTGGTC

a E I V D F A K Q V P G F L Q L G R E D Q -
b R S W T S L S K C L V S C S W A G R T R -
c D R G L R * A S A W F P A A G P G G P D -

BfaI
BlsI |
BisI| |
BsmAI| |
Fnu4HI| |
GluI| |
NlaIII|| |
TseI|| |
CviAII ||| |
BstKTI| ||| |
FatI| ||| | HaeII
BtsCI AcuI|| ||| | HhaI|
BslI | DpnI|| ||| | GlaI||
EcoNI | | Eco57MI|| ||| | HinP1I|||
Hpy188III| | | MboI ||| ||| | BstNI ||||
HpyAV || | | Hpy188III | ||| ||| | ScrFI ||||
FokI | || | | TaqI| | ||| ||| | CviKI-1 | ||||
BstKTI| | || | | SfaNI|| | ||| ||| | PspGI | ||||
DpnI|| | || |MnlI BbvI ||| | ||| ||| | StyD4I | ||||
||| | || | | | ||| | ||| ||| | | | ||||
ATCGCCCTCCTGAAGGCATCCACTATCGAGATCATGCTGCTAGAGACAGCCAGGCGCTAC
901 ---------+---------+---------+---------+---------+---------+ 960
TAGCGGGAGGACTTCCGTAGGTGATAGCTCTAGTACGACGATCTCTGTCGGTCCGCGATG

a I A L L K A S T I E I M L L E T A R R Y -
b S P S * R H P L S R S C C * R Q P G A T -
c R P P E G I H Y R D H A A R D S Q A L Q -

XmnI
HpyAV|
HphI ||
Hpy188III | ||
BssSI SetI | | || SetI
BsmAI | HphI HpyAV| | | || SfcI| BdaI
| | | || | | || || |
AACCACGAGACAGAGTGTATCACCTTCTTGAAGGACTTCACCTACAGCAAGGACGACTTC
961 ---------+---------+---------+---------+---------+---------+ 1020
TTGGTGCTCTGTCTCACATAGTGGAAGAACTTCCTGAAGTGGATGTCGTTCCTGCTGAAG

a N H E T E C I T F L K D F T Y S K D D F -
b T T R Q S V S P S * R T S P T A R T T S -
c P R D R V Y H L L E G L H L Q Q G R L P -

SetI
BslI |
PstI| |
SbfI| |
HpyCH4V || |
TspDTI || | AciI
Cac8I | || | NlaIII
SfcI | || | CviAII |
FalI| | || | MwoI |
CviKI-1|| | || | FatI| |
HaeIII|| | || | CviKI-1|| |
StuI|| | || | HaeIII|| |
Cac8I ||| | || | BmgT120I||| |
HpyCH4V | ||| | || | Cac8I|||| |
AarI| | ||| | || | FauI Sau96I|||| |
BspMI| | ||| | || | MboII BccI| AciI ||||| |
HpyCH4III || | ||| | || | BsgI | TaqI || BstUI ||||| |
| || | ||| | || | | | | || | ||||| |
CACCGTGCAGGCCTGCAGGTGGAGTTCATCAACCCCATCTTCGAGTTCTCGCGGGCCATG
1021 ---------+---------+---------+---------+---------+---------+ 1080
GTGGCACGTCCGGACGTCCACCTCAAGTAGTTGGGGTAGAAGCTCAAGAGCGCCCGGTAC

a H R A G L Q V E F I N P I F E F S R A M -
b T V Q A C R W S S S T P S S S S R G P C -
c P C R P A G G V H Q P H L R V L A G H A -

BspCNI
BseMII|
BstNI||
ScrFI||
CviKI-1 |||
HaeIII |||
PspGI |||
StyD4I |||
BmgT120I| |||
GsaI| |||
Sau96I|| |||
BseYI ||| |||
CviKI-1 ||| |||
TauI ||| |||
BlsI| ||| |||
BisI|| ||| |||
Fnu4HI|| ||| |||
GluI|| ||| |||
AciI||| ||| |||
TauI||| ||| ||| HgaI
XcmI||| ||| ||| MwoI
BlsI|||| ||| ||| RsaI
BslI|||| ||| ||| CviQI|
BisI||||| ||| ||| BtgZI ||
Fnu4HI||||| ||| ||| DdeI| || EaeI
GluI||||| ||| ||| Hpy99I|| || NmeAIII MboII BccI EagI
|||||| ||| ||| ||| || | | | |
CGGCGGCTGGGCCTGGACGACGCTGAGTACGCCCTGCTCATCGCCATCAACATCTTCTCG
1081 ---------+---------+---------+---------+---------+---------+ 1140
GCCGCCGACCCGGACCTGCTGCGACTCATGCGGGACGAGTAGCGGTAGTTGTAGAAGAGC

a R R L G L D D A E Y A L L I A I N I F S -
b G G W A W T T L S T P C S S P S T S S R -
c A A G P G R R * V R P A H R H Q H L L G -

BstUI
TauI
BlsI|
AciI||
BisI||
Fnu4HI||
GluI||
MnlI||
CviKI-1|||
HaeIII|||
BmgT120I||||
Sau96I||||| BbvI
NciI|||||| SetI|
ScrFI|||||| TaiI|
HpaII||||||| BbvI ||
CviKI-1|||||||| BsaAI ||
HpyCH4V ||||||||| HpyCH4IV| ||
SetI| ||||||||| MnlI || ||
TaiI| ||||||||| BbvI| || ||
MwoI || ||||||||| CviKI-1 || || ||
HpyCH4IV| || ||||||||| BlsI| || || ||
BmgT120I || || ||||||||| BisI|| || || ||
CviKI-1 || || ||||||||| Fnu4HI|| || || ||
HaeIII || || ||||||||| GluI|| || || ||
Sau96I| || || ||||||||| TseI||| || || ||
BsiEI || || || ||||||||| BlsI|||| || || ||
HpaII || || || ||||||||| BisI||||| || || ||
BsrFI| || || || ||||||||| Fnu4HI||||| || || ||
BsiEI || || || || ||||||||| GluI||||| || || ||
CviKI-1| || || || ||StyD4I|||||||| BsgI HpyCH4V|||||| || || ||
HaeIII| || || || ||NlaIV|||||||||BslI| TseI|||||| || || ||
|| || || || || |||||||||| || ||||||| || || ||
GCCGACCGGCCCAACGTGCAGGAGCCGGGCCGCGTGGAGGCGTTGCAGCAGCCCTACGTG
1141 ---------+---------+---------+---------+---------+---------+ 1200
CGGCTGGCCGGGTTGCACGTCCTCGGCCCGGCGCACCTCCGCAACGTCGTCGGGATGCAC

a A D R P N V Q E P G R V E A L Q Q P Y V -
b P T G P T C R S R A A W R R C S S P T W -
c R P A Q R A G A G P R G G V A A A L R G -

HhaI
GlaI|
HinP1I||
BlsI|||
SetI|||
BisI||||
Fnu4HI||||
GluI||||
AluI|||||
CviKI-1|||||
MspA1I|||||
PvuII|||||
TseI|||||
MwoI ||||||
BmgT120I | ||||||
AvaII| | ||||||
Sau96I| | ||||||
TauI || | ||||||
BlsI| || | ||||||
AciI|| || | ||||||
BisI|| || | ||||||
BlsI Fnu4HI|| || | |||||| CviAII
BisI| GluI|| || | |||||| FatI|
Fnu4HI| CviKI-1||| || | |||||| HhaI|
GluI| Hpy188III |||| || | |||||| GlaI||
HaeII| HhaI | |||| || | |||||| BstUI|||
HhaI|| MnlI | |||| || | |||||| HinP1I|||
TseI|| GlaI| |HaeIII||| || | |||||| MwoI||||
GlaI||| BstUI|| | BbvI|||| || | |||||| AciI|||||
HinP1I|||| HinP1I|| |SfaNI|||| || | ||||||MwoI||||||
||||| ||| | ||||| || | |||||| |||||||
GAGGCGCTGCTGTCCTACACGCGCATCAAGAGGCCGCAGGACCAGCTGCGCTTCCCGCGC
1201 ---------+---------+---------+---------+---------+---------+ 1260
CTCCGCGACGACAGGATGTGCGCGTAGTTCTCCGGCGTCCTGGTCGACGCGAAGGGCGCG

a E A L L S Y T R I K R P Q D Q L R F P R -
b R R C C P T R A S R G R R T S C A S R A -
c G A A V L H A H Q E A A G P A A L P A H -

BbsI
Hpy188I
MboII
Bme1580I |
BsiHKAI |
Bsp1286I |
BspMI | |
Hpy166II | |
HpyCH4V | |
ApaLI | | |
BanII | | | |
BsiHKAI | | | |
Bsp1286I | | | |
SacI | | | |
SetI | | | |
AluI | | | | |
CviKI-1 | | | | |
EcoICRI | | | | |
MwoI | | | | | |
BlpI| | | | | | |
DdeI| | | | | | |
Cac8I || | | | | | |
HphI| || | | | | | |
HhaI|| || | | | | | |
FspI||| || | | | | | |
GlaI||| || | | | | | |
HinP1I|||| || | | | | | |
BspCNI||||| || | | | | | |
BseMII|||||| || | | | | | |
Cac8I|||||| || | | | | | |
TspDTI|||||| || | | | | | |
CviKI-1 ||||||| || | | | | | |
SetI | ||||||| || | | | | | |
AluI | | ||||||| || | | | | | |
CviKI-1 | | ||||||| || | | | | | |
MwoI | | | ||||||| || | | | | | |
NlaIII | | | ||||||| || | | | | | |
CviAII | | | | ||||||| || | | | | | |
Hpy188III | | | | ||||||| || | | | | | |
BspHI| | | | | ||||||| || | | | | | |
FatI| | | | | ||||||| || | | | | | |
MslI|| | | | | ||||||| || | | | | | |
NlaIII||| | | | | ||||||| || | | | | | |
NspI||| | | | | ||||||| || | | | | | | SetI
SphI||| | | | | ||||||| || | | | | | | BpmI|
FauI|||| | | | | ||||||| || | | | | | |Eco57MI|
Cac8I||||| | | | | ||||||| || | | | | |MwoI ||
|||||| | | | | ||||||| || | | | | | | ||
ATGCTCATGAAGCTGGTGAGCCTGCGCACGCTGAGCTCTGTGCACTCGGAGCAGGTCTTC
1261 ---------+---------+---------+---------+---------+---------+ 1320
TACGAGTACTTCGACCACTCGGACGCGTGCGACTCGAGACACGTGAGCCTCGTCCAGAAG

a M L M K L V S L R T L S S V H S E Q V F -
b C S * S W * A C A R * A L C T R S R S S -
c A H E A G E P A H A E L C A L G A G L R -

MwoI
TauI | BssSI
BstNI BlsI| | Hpy166II|
ScrFI AciI|| | AatII||
BbvI | BisI|| | SetI||
PfoI | Fnu4HI|| | TaiI||
PspGI | GluI|| | ZraI |||
StyD4I | BlsI ||| | BsaHI| |||
NlaIV| | SetI ||| | HpyCH4IV| |||
CviKI-1|| | BisI| ||| | BstKTI || |||
TauI|| | Fnu4HI| ||| | DpnI| || |||
BlsI||| | GluI| ||| | BglII || || |||
BisI|||| | AluI|| ||| | BstYI || || |||
Fnu4HI|||| | CviKI-1|| ||| | MboI || || |||
GluI|||| | TseI|| ||| | Hpy188I | || || |||
AciI||||| | MmeI ||| ||| | MnlI| | || || |||
|||||| | | ||| ||| | || | || || |||
GCCTTGCGGCTCCAGGACAAGAAGCTGCCGCCTCTGCTGTCGGAGATCTGGGACGTCCAC
1321 ---------+---------+---------+---------+---------+---------+ 1380
CGGAACGCCGAGGTCCTGTTCTTCGACGGCGGAGACGACAGCCTCTAGACCCTGCAGGTG

a A L R L Q D K K L P P L L S E I W D V H -
b P C G S R T R S C R L C C R R S G T S T -
c L A A P G Q E A A A S A V G D L G R P R -

BsmFI
|
GAGTGA
1381 ------ 1386
CTCACT

a E * -
b S -
c V -

Enzymes that do cut:

AarI AatII AciI AcuI AhdI AlfI AloI AluI
AlwI AlwNI